Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0021g01060.t01
CDS Infomation

cds chromosome:12X:15:11091439:11096249:1 gene:VIT_15s0021g01060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGCTGCAGGGTTGGGTTTAACTACAAAGATGGTGGTGTCAGTAGTGTTGGGTGGT
GTTCTAGGGTTGATTGTGTATCTGTACGGTGTTTTGGTGTTGCACCCAAGGAGGCTTCAA
TCAAAGCTTAGAAGGCAAGGGATTAGAGGGCCTTCACCTTCACTTCTGATTGGGAATATA
GCTGAGATGAAGAAGATCCAACTCCAGGCACCTCCAAGTACTGCTACAGAGCACCATCTT
CCTCTTTCCCATGACTGGCCTTCCACTGTCTTTCCATATATCCGGCAATGGAGAATTAAA
TATGGACCAACATTCACATATTCAACTGGAAATGCACAGCTACTATGCATAACAGATCCA
GAGATGGTGAAACACATAAGCCTCTGCACTTCTCTGAGTCTAGGAAAACCTTCTTTTTTA
GCAAAGGAGCGCAAGGCTCTGTTTGGGAGTGGCATTCTGACATCAAGTGGTGCAAATTGG
GCTTACCAGAAGAAGATCATTGCTCCTGAGTTGTACATGGACAAGGTTAAGGGAATGGTG
AAGTTAATGGTGGATTCTACCACCTCATTGCTAAGATCTTGGGAGAGTAGAATTGAAAAA
GAGGAAGGGTTTGCAGATATTAGAGTTGATGAGGACTTGAGAAGTTTATCTGCAGATATA
ATCTCAAGAGCTTGCTTTGGAAGCAGTTATTCCCAAGGGAAAGACATATTCGTAAAGCTT
CGAACTCTTCAAACGGTCATGTCCGATGGATTCCTCCATTTTGGGGTTCTTGGCATTAGT
CACTTGCCAAGCAAAAGTAATAGACTGAAATGGAGGTTGGAGAAAGAGATCGACACGATG
ATAATCAACGTGGTAAAAGAACGAATTGGGGCTCAACACGGTGAGAAGGACCTTTTGCAA
ATGATACTTGAGGCTACCAAGAATGCTTATGCTGAGTATGATAGACCCTTTGTGAATATG
AGTTCGGACAAGTTCATAGTAGACAATTGCAAGAACATATACTTTGCTGGCCACGAGACC
ACTGCCACGACCGCTACATGGGCCTTAATATTACTAGCTGCAAATCCAGATTGGCAAGCA
CGCGCTCGTGCTGAGGTGCTTGAAATTTGTAAGGATGGCACCGCCCTCCCTGATGCTGAG
ATGCTTCGAAACATGAAAATATTAACTATGGTGATTCAGGAGACATTGCGACTTTATCCG
GTGTCATCATTTGTGGCAAGAGAAGCCTTTGAAGATGTGAAGTTCAAAGACCTTTTAGTT
CCAAAAAATACAATAATTTGGATTCCAGTTCCGACACTGCACCAGAATCCTGATGTATGG
GGGGCTGATGTGAACCTGTTCAATCCAGAAAGGTTTGCCAATGGAATCCAAGGGGCATGT
AAAATTCCTCAGGCTTATATGCCATTTGGAATGGGGATGCGCATCTGTGTTGGCCAGCAC
TTTGCCATGGTAGAACTGAAGGTGGTTTTGTCCCTCATTCTATCAAAGTTTTGCTTCTCG
CTCTCACCAGCATATCAACACTCCCCCATGTTTAGGTTAGTTATTGAACCAGAAAATGGA
GCTAGCCTCCTTATGAGGAAAGTGTGA

Peptide Sequence

PEP ID

VIT_15s0021g01060.t01
PEP Infomation

pep chromosome:12X:15:11091439:11096249:1 gene:VIT_15s0021g01060 transcript:VIT_15s0021g01060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEAAGLGLTTKMVVSVVLGGVLGLIVYLYGVLVLHPRRLQSKLRRQGIRGPSPSLLIGNI
AEMKKIQLQAPPSTATEHHLPLSHDWPSTVFPYIRQWRIKYGPTFTYSTGNAQLLCITDP
EMVKHISLCTSLSLGKPSFLAKERKALFGSGILTSSGANWAYQKKIIAPELYMDKVKGMV
KLMVDSTTSLLRSWESRIEKEEGFADIRVDEDLRSLSADIISRACFGSSYSQGKDIFVKL
RTLQTVMSDGFLHFGVLGISHLPSKSNRLKWRLEKEIDTMIINVVKERIGAQHGEKDLLQ
MILEATKNAYAEYDRPFVNMSSDKFIVDNCKNIYFAGHETTATTATWALILLAANPDWQA
RARAEVLEICKDGTALPDAEMLRNMKILTMVIQETLRLYPVSSFVAREAFEDVKFKDLLV
PKNTIIWIPVPTLHQNPDVWGADVNLFNPERFANGIQGACKIPQAYMPFGMGMRICVGQH
FAMVELKVVLSLILSKFCFSLSPAYQHSPMFRLVIEPENGASLLMRKV

Transcript Sequence

Transcript ID

VIT_15s0021g01060.t01
Transcript Infomation

cdna chromosome:12X:15:11091439:11096249:1 gene:VIT_15s0021g01060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGTTCACAGAAAAATATTACAAGAAGGAAAGAAGAAAAGAAAGGAGAAGGGAGAGAGGG
AGGGAAGGGAGGAGGAAAAATGGAAGCTGCAGGGTTGGGTTTAACTACAAAGATGGTGGT
GTCAGTAGTGTTGGGTGGTGTTCTAGGGTTGATTGTGTATCTGTACGGTGTTTTGGTGTT
GCACCCAAGGAGGCTTCAATCAAAGCTTAGAAGGCAAGGGATTAGAGGGCCTTCACCTTC
ACTTCTGATTGGGAATATAGCTGAGATGAAGAAGATCCAACTCCAGGCACCTCCAAGTAC
TGCTACAGAGCACCATCTTCCTCTTTCCCATGACTGGCCTTCCACTGTCTTTCCATATAT
CCGGCAATGGAGAATTAAATATGGACCAACATTCACATATTCAACTGGAAATGCACAGCT
ACTATGCATAACAGATCCAGAGATGGTGAAACACATAAGCCTCTGCACTTCTCTGAGTCT
AGGAAAACCTTCTTTTTTAGCAAAGGAGCGCAAGGCTCTGTTTGGGAGTGGCATTCTGAC
ATCAAGTGGTGCAAATTGGGCTTACCAGAAGAAGATCATTGCTCCTGAGTTGTACATGGA
CAAGGTTAAGGGAATGGTGAAGTTAATGGTGGATTCTACCACCTCATTGCTAAGATCTTG
GGAGAGTAGAATTGAAAAAGAGGAAGGGTTTGCAGATATTAGAGTTGATGAGGACTTGAG
AAGTTTATCTGCAGATATAATCTCAAGAGCTTGCTTTGGAAGCAGTTATTCCCAAGGGAA
AGACATATTCGTAAAGCTTCGAACTCTTCAAACGGTCATGTCCGATGGATTCCTCCATTT
TGGGGTTCTTGGCATTAGTCACTTGCCAAGCAAAAGTAATAGACTGAAATGGAGGTTGGA
GAAAGAGATCGACACGATGATAATCAACGTGGTAAAAGAACGAATTGGGGCTCAACACGG
TGAGAAGGACCTTTTGCAAATGATACTTGAGGCTACCAAGAATGCTTATGCTGAGTATGA
TAGACCCTTTGTGAATATGAGTTCGGACAAGTTCATAGTAGACAATTGCAAGAACATATA
CTTTGCTGGCCACGAGACCACTGCCACGACCGCTACATGGGCCTTAATATTACTAGCTGC
AAATCCAGATTGGCAAGCACGCGCTCGTGCTGAGGTGCTTGAAATTTGTAAGGATGGCAC
CGCCCTCCCTGATGCTGAGATGCTTCGAAACATGAAAATATTAACTATGGTGATTCAGGA
GACATTGCGACTTTATCCGGTGTCATCATTTGTGGCAAGAGAAGCCTTTGAAGATGTGAA
GTTCAAAGACCTTTTAGTTCCAAAAAATACAATAATTTGGATTCCAGTTCCGACACTGCA
CCAGAATCCTGATGTATGGGGGGCTGATGTGAACCTGTTCAATCCAGAAAGGTTTGCCAA
TGGAATCCAAGGGGCATGTAAAATTCCTCAGGCTTATATGCCATTTGGAATGGGGATGCG
CATCTGTGTTGGCCAGCACTTTGCCATGGTAGAACTGAAGGTGGTTTTGTCCCTCATTCT
ATCAAAGTTTTGCTTCTCGCTCTCACCAGCATATCAACACTCCCCCATGTTTAGGTTAGT
TATTGAACCAGAAAATGGAGCTAGCCTCCTTATGAGGAAAGTGTGATATATTATGTATCA
AGTTGGAGATGATCAATCATTCATATATATATGTGAACTTATTCCTTGTACAGATGGACT
TGTTATGCACATAAAATCCTCAAGCAATTAGTACTTATAGGCCTTGTAAATGCAAAAGCA
TCAATCATCTCTGAGCTAGCTAGGATGATTGATTTGTTATTTGTCTTGCTAAGGATGAAA
TGTTTGCTATAAGCCTTGTGGATGAATGTTAGATTATTCTTCTTCAAACTTATATT