Gene sequences

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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_14s0219g00230.t01
CDS Infomation	cds chromosome:12X:14:26481825:26483236:1 gene:VIT_14s0219g00230 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F6GX67]
Sequence	ATGGCCACCTTTGCAATGTCTCTTCTCTTCTTGTTCTCTCTTCTTCCTCCAATTCTTGGT TCCTCCGCACCAGTCCAAGACCCTGAAGTAGTTGTGCAAGAGGTGCACAGGAGCATCAAT GCCTCTAGGAGGAACTTGGGCTATTTCTCTTGTGGAACAGGCAACCCTATCGACGATTGC TGGAGGTGCGACGCCAACTGGGACAAGAACCGCCAGCGGTTAGCCGACTGCGCTATTGGG TTTGGCAAGGATGCAATGGGCGGAAAGAATGGTAGAATTTACGTGGTCACCGACTCCGAG GACGATGACCCTGTCAATCCAAGGCCAGGGACTCTCCGGCATGCTGTGATCCAAGATGAG CCATTGTGGATCATCTTCAAGCGTGACATGGTCATCAAGCTGAAGCAAGAGCTGGTGATG AACTCGTTCAAGACCATTGATGGTAGGGGTGCTAGCGTTCACATTGCTGGAGGGCCATGC ATTACCATCCATTACGCCAGTAACATCATCATACATGGTCTCCATATCCATGACTGTAAG CAAGGAGGGAATGCCAACATCAGAAACTCTCCTCACCACTCCGGCTGGTGGACAGTATCT GATGGTGATGGGGTGTCCATCTTCGGTGGGAGGCATATATGGGTTGACCATTGCTCTTTG TCCAACTGCCATGACGGCCTCATTGATGCCATCCATGGATCCACCGCCATAACCATCTCT AACAATTTCATGACTCACCATGACAAGGTCATGCTCCTGGGCCACAGCGATTCTTATACA GAAGACAAGAACATGCAAGTCACCATTGCCTTCAACCATTTCGGAGAGGGGCTCGTGCAG AGAATGCCCAGATGTAGGCATGGGTATTTTCATGTGGTGAACAACGACTACACCCACTGG GAAATGTATGCCATTGGTGGAAGTGCTGACCCTACCATCAACAGCCAGGGCAACAGATTC CTAGCACCCAATGATAGATTTAAGAAAGCTGTGACAAAGCATGAGGATGCACCAGAAAGT GAGTGGAGGCATTGGAACTGGAGATCTGAAGGGGACCTGATGTTGAATGGTGCCTTCTTC CTGCAGTCGGCGGCAGGCGCTTCTTCCAGCTACGCCAGAGCTTCCAGCTTGAGTGCCAGA CCATCTTCTCTGGTGGGTTCAATCACCTTGGGTTCTGGCGCACTCGGCTGCAGGAAGGGG TCTCGTTGCTAA

Peptide Sequence

PEP ID	VIT_14s0219g00230.t01
PEP Infomation	pep chromosome:12X:14:26481825:26483236:1 gene:VIT_14s0219g00230 transcript:VIT_14s0219g00230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F6GX67]
Sequence	MATFAMSLLFLFSLLPPILGSSAPVQDPEVVVQEVHRSINASRRNLGYFSCGTGNPIDDC WRCDANWDKNRQRLADCAIGFGKDAMGGKNGRIYVVTDSEDDDPVNPRPGTLRHAVIQDE PLWIIFKRDMVIKLKQELVMNSFKTIDGRGASVHIAGGPCITIHYASNIIIHGLHIHDCK QGGNANIRNSPHHSGWWTVSDGDGVSIFGGRHIWVDHCSLSNCHDGLIDAIHGSTAITIS NNFMTHHDKVMLLGHSDSYTEDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW EMYAIGGSADPTINSQGNRFLAPNDRFKKAVTKHEDAPESEWRHWNWRSEGDLMLNGAFF LQSAAGASSSYARASSLSARPSSLVGSITLGSGALGCRKGSRC

Transcript Sequence

Transcript ID	VIT_14s0219g00230.t01
Transcript Infomation	cdna chromosome:12X:14:26481825:26483236:1 gene:VIT_14s0219g00230 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F6GX67]
Sequence	ACAACAAAAATGGCCACCTTTGCAATGTCTCTTCTCTTCTTGTTCTCTCTTCTTCCTCCA ATTCTTGGTTCCTCCGCACCAGTCCAAGACCCTGAAGTAGTTGTGCAAGAGGTGCACAGG AGCATCAATGCCTCTAGGAGGAACTTGGGCTATTTCTCTTGTGGAACAGGCAACCCTATC GACGATTGCTGGAGGTGCGACGCCAACTGGGACAAGAACCGCCAGCGGTTAGCCGACTGC GCTATTGGGTTTGGCAAGGATGCAATGGGCGGAAAGAATGGTAGAATTTACGTGGTCACC GACTCCGAGGACGATGACCCTGTCAATCCAAGGCCAGGGACTCTCCGGCATGCTGTGATC CAAGATGAGCCATTGTGGATCATCTTCAAGCGTGACATGGTCATCAAGCTGAAGCAAGAG CTGGTGATGAACTCGTTCAAGACCATTGATGGTAGGGGTGCTAGCGTTCACATTGCTGGA GGGCCATGCATTACCATCCATTACGCCAGTAACATCATCATACATGGTCTCCATATCCAT GACTGTAAGCAAGGAGGGAATGCCAACATCAGAAACTCTCCTCACCACTCCGGCTGGTGG ACAGTATCTGATGGTGATGGGGTGTCCATCTTCGGTGGGAGGCATATATGGGTTGACCAT TGCTCTTTGTCCAACTGCCATGACGGCCTCATTGATGCCATCCATGGATCCACCGCCATA ACCATCTCTAACAATTTCATGACTCACCATGACAAGGTCATGCTCCTGGGCCACAGCGAT TCTTATACAGAAGACAAGAACATGCAAGTCACCATTGCCTTCAACCATTTCGGAGAGGGG CTCGTGCAGAGAATGCCCAGATGTAGGCATGGGTATTTTCATGTGGTGAACAACGACTAC ACCCACTGGGAAATGTATGCCATTGGTGGAAGTGCTGACCCTACCATCAACAGCCAGGGC AACAGATTCCTAGCACCCAATGATAGATTTAAGAAAGCTGTGACAAAGCATGAGGATGCA CCAGAAAGTGAGTGGAGGCATTGGAACTGGAGATCTGAAGGGGACCTGATGTTGAATGGT GCCTTCTTCCTGCAGTCGGCGGCAGGCGCTTCTTCCAGCTACGCCAGAGCTTCCAGCTTG AGTGCCAGACCATCTTCTCTGGTGGGTTCAATCACCTTGGGTTCTGGCGCACTCGGCTGC AGGAAGGGGTCTCGTTGCTAATTAAAT