Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_14s0171g00460.t01
CDS Infomation

cds chromosome:12X:14:26263495:26271381:-1 gene:VIT_14s0171g00460 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytosolic Fe-S cluster assembly factor NBP35 [Source:UniProtKB/TrEMBL;Acc:F6I5M0]
Sequence

ATGGAGAACGGCGACAGCAATCAAATTCCCGAAAACGCCAACGAGCATTGCCCAGGTCCT
CAATCGGAGTCTGCAGGACAATCTGACGCTTGTCAGGGATGCCCTAATCAGGAGGCTTGT
GCTACTGCGCCTAAAGGCCCTGACCCAGACTTGGTTGCCATTGCTGAGCGAATGGCTACT
GTGAAGCGTAAGATACTGGTTTTGTCAGGCAAAGGTGGGGTTGGCAAGAGCACATTCTCT
GCCCAACTCTCATTTGCTCTAGCAGCTATGGACTTCCAAGTGGGTCTCCTTGATATCGAC
ATTTGTGGCCCAAGTATTCCCAAGATGCTTGGTCTAGAAGGACAAGACATCCACCAGAGC
AACCTTGGCTGGTCTCCTGTCTATGTTGAGTCGAACCTCGGGGTCATGTCCATCGGTTTC
ATGCTTCCAAACCCGGATGAAGCTGTCATATGGAGGGGCCCCCGTAAAAATGGGATCATC
AAGCAATTCCTAAAGGATGTGTACTGGGGAGAACTCGACTTCCTAGTGGTTGATGCCCCG
CCAGGGACTTCGGACGAGCACATCTCTATTGTCCAATTCCTCCAGGGAACTGGAATAGAT
GGTGCAATCATAGTCACCACCCCACAACAAGTCTCTCTAATCGACGTGCGCAAAGAAGTG
AGTTTCTGCAAGAAAGTTGGAGTAGAAGTTCTCGGAGTGGTTGAGAACATGAGCGGGTTG
TGCCAACCAGTGACAGATTTCAGGTTTACAAGGGTGACAGAGACAGGTGAACAAAAAGAT
GTGACAGAGTGGGTGATTGAATATATGAGGGAGAAAGCTCCAGAAATGCTAAACTTGGTT
GCTTGCAGTGAGGTGTTTGATAGTAGTAGCGGTGGGGCAGCAAAAATGTGCAAGGAAATG
AATGTCCCCTTCTTGGGGAAGGTACCATTAGACCCACAGCTATGCAAGGCAGCTGAAGAA
GGTAGATCCTGCTTTGCTGATACGAAATGTGGGGTGAGCGCTCCTGCCCTTCAGAGGATC
ATAGAAAAGCTGGTGGCAAATCAGGCACTGTCTACCACTTGA

Peptide Sequence

PEP ID

VIT_14s0171g00460.t01
PEP Infomation

pep chromosome:12X:14:26263495:26271381:-1 gene:VIT_14s0171g00460 transcript:VIT_14s0171g00460.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytosolic Fe-S cluster assembly factor NBP35 [Source:UniProtKB/TrEMBL;Acc:F6I5M0]
Sequence

MENGDSNQIPENANEHCPGPQSESAGQSDACQGCPNQEACATAPKGPDPDLVAIAERMAT
VKRKILVLSGKGGVGKSTFSAQLSFALAAMDFQVGLLDIDICGPSIPKMLGLEGQDIHQS
NLGWSPVYVESNLGVMSIGFMLPNPDEAVIWRGPRKNGIIKQFLKDVYWGELDFLVVDAP
PGTSDEHISIVQFLQGTGIDGAIIVTTPQQVSLIDVRKEVSFCKKVGVEVLGVVENMSGL
CQPVTDFRFTRVTETGEQKDVTEWVIEYMREKAPEMLNLVACSEVFDSSSGGAAKMCKEM
NVPFLGKVPLDPQLCKAAEEGRSCFADTKCGVSAPALQRIIEKLVANQALSTT

Transcript Sequence

Transcript ID

VIT_14s0171g00460.t01
Transcript Infomation

cdna chromosome:12X:14:26263495:26271381:-1 gene:VIT_14s0171g00460 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytosolic Fe-S cluster assembly factor NBP35 [Source:UniProtKB/TrEMBL;Acc:F6I5M0]
Sequence

ATAGAAAGACGGTGGGGAATGGTTAACACGTAAACGACACCGTTTCCATATTCAATACTC
CTAGAAGCCCCTGCTGTGCGCGAAGGAAGCAGAATAGAAGAAGAAGAAGAAGAAAGCGGC
TATGGAGAACGGCGACAGCAATCAAATTCCCGAAAACGCCAACGAGCATTGCCCAGGTCC
TCAATCGGAGTCTGCAGGACAATCTGACGCTTGTCAGGGATGCCCTAATCAGGAGGCTTG
TGCTACTGCGCCTAAAGGCCCTGACCCAGACTTGGTTGCCATTGCTGAGCGAATGGCTAC
TGTGAAGCGTAAGATACTGGTTTTGTCAGGCAAAGGTGGGGTTGGCAAGAGCACATTCTC
TGCCCAACTCTCATTTGCTCTAGCAGCTATGGACTTCCAAGTGGGTCTCCTTGATATCGA
CATTTGTGGCCCAAGTATTCCCAAGATGCTTGGTCTAGAAGGACAAGACATCCACCAGAG
CAACCTTGGCTGGTCTCCTGTCTATGTTGAGTCGAACCTCGGGGTCATGTCCATCGGTTT
CATGCTTCCAAACCCGGATGAAGCTGTCATATGGAGGGGCCCCCGTAAAAATGGGATCAT
CAAGCAATTCCTAAAGGATGTGTACTGGGGAGAACTCGACTTCCTAGTGGTTGATGCCCC
GCCAGGGACTTCGGACGAGCACATCTCTATTGTCCAATTCCTCCAGGGAACTGGAATAGA
TGGTGCAATCATAGTCACCACCCCACAACAAGTCTCTCTAATCGACGTGCGCAAAGAAGT
GAGTTTCTGCAAGAAAGTTGGAGTAGAAGTTCTCGGAGTGGTTGAGAACATGAGCGGGTT
GTGCCAACCAGTGACAGATTTCAGGTTTACAAGGGTGACAGAGACAGGTGAACAAAAAGA
TGTGACAGAGTGGGTGATTGAATATATGAGGGAGAAAGCTCCAGAAATGCTAAACTTGGT
TGCTTGCAGTGAGGTGTTTGATAGTAGTAGCGGTGGGGCAGCAAAAATGTGCAAGGAAAT
GAATGTCCCCTTCTTGGGGAAGGTACCATTAGACCCACAGCTATGCAAGGCAGCTGAAGA
AGGTAGATCCTGCTTTGCTGATACGAAATGTGGGGTGAGCGCTCCTGCCCTTCAGAGGAT
CATAGAAAAGCTGGTGGCAAATCAGGCACTGTCTACCACTTGAGTAGATAATGGTGCTTA
GGATGTTGAAGGTTTTGCTCACTGTTTCCGGCATATACATTAAATTACTCAGAAGTTATA
CGTAACCATGACACCTTTTTGTCTTTTCTAATTCTTATCATCTTTATTCAGAGTGCTAAA
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