Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_14s0171g00190.t01
CDS Infomation	cds chromosome:12X:14:26043720:26051428:-1 gene:VIT_14s0171g00190 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protoporphyrinogen oxidase [Source:UniProtKB/TrEMBL;Acc:D7UBE4]
Sequence	ATGGCTGAGAAATCAGATGCCCAGTCACACTATAATGGTTCTGGTAAAAGAGTGGCTGTT GTTGGTGCTGGTGTTAGTGGGCTTGCTGCAGCATACAAATTGAAATTACATGGCGTGAAC ATCACATTATATGAAGCTGAAGAAAGAGCTGGTGGGAAATTAAGAAGTGTTTCACAACAT GGTCTAGTTTGGGATGAGGGTGCCAATACAATGACGGAGAGTGAGATAGAGGTCGGAAGC TTGCTTGATAATCTTAGGCTTCGAGAGAAGCAACAGTTTCCAATTTCACAGAACAAGCGG TATATTGTAAGAAATGGAATGCCTGTCCTGTTACCCTCTAATCCTATTGCGCTGATCAAG AGCAATATCCTGTCAGCAAAATCCAAGTTTCAGATAATTTTGGAGCCATTTTTGTGGAAG AAGAGTGACCTTTCAAAGGTGTCTGATGATCATATGAAGGAAAGTGTGGGCGGGTTCTTT CAGCGTCATTTCGGGAAAGAGGTTGTTGATTATTTAATTGACCCTTTTGTGGCGGGTACA AGTGGAGGTGATCCTGAATCACTTTCTATGCATCATACTTTTCCAGAGCTATGGAATCTG GAAAAAAGGTTTGGTTCAATCATAGCTGGGGCAGTTCTGTCCAAGTTATCTGCTAAAAGA GAAAAAAGAGGAGAAACAAAGGGTTCTTCGGAGAAAAAGAAGCGTCAGCGCGGTTCATTT TCCTTCCAGGGTGGAATGCAGACGCTCACTGACACATTATGCAAAGAGCTTGGCAAAGAC AAACTTAGACTCAAGTCAAAGGTGTTGTCATTATCTTACAGTCATGGTGAGAAGTCTGCA TTAGAGAATTGGTCAGTTGCTTATGCTTCAAACCCTGGAAAGCAATCAAAAGATTTATCT TTTGATGCTGTTATCATGACAGCTCCTCTCTGTAATGTTCGAGAAATGAAGATCATGAAA AAAGGAAACCCCTTCCTGCTTGACTTTCTTCCTGAGGTGAGTTATTTGCCACTGTCAGTT ATAATCACCACCTTTAAAAAGGAGAATGTCAAGAGGCCCCTTGAGGGATTTGGAGTTCTT GTTCCTTCCAAAGAGCAACAAAATGGTTTAAAGACCCTCGGTACACTCTTTTCCTCTATG ATGTTTCCAGACCGTGCTCCCAATGACCTATATCTCTATACTACCTTCATTGGGGGAAGT CGAAACCGGGAACTAGCAAAAGCTTCAACGGATGAGCTCAAGCAGATAGTCACCTCTGAC CTTAGACAGTTACTGGGTGCAGAGGGGGAGCCAACATTTGTGAACCATTTCTACTGGAGT AAAGCGTTTCCATTATTTGGGCACAACTATGATTCAGTTCTAGAAGCCATTGACAAGATG GAAAAAGATCTTCCGGGATTCTTCTATGCAGGTAACCATAAGGGCGGGCTTTCAGTTGGA AAAGCAATAGCCTCTGGGTGCAAAGCAGCTGATCTCGTAATATCCTACCTCAACTCTTCG TCAGATGGTAAGATGTTCAAGGAGTGA

Peptide Sequence

PEP ID	VIT_14s0171g00190.t01
PEP Infomation	pep chromosome:12X:14:26043720:26051428:-1 gene:VIT_14s0171g00190 transcript:VIT_14s0171g00190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protoporphyrinogen oxidase [Source:UniProtKB/TrEMBL;Acc:D7UBE4]
Sequence	MAEKSDAQSHYNGSGKRVAVVGAGVSGLAAAYKLKLHGVNITLYEAEERAGGKLRSVSQH GLVWDEGANTMTESEIEVGSLLDNLRLREKQQFPISQNKRYIVRNGMPVLLPSNPIALIK SNILSAKSKFQIILEPFLWKKSDLSKVSDDHMKESVGGFFQRHFGKEVVDYLIDPFVAGT SGGDPESLSMHHTFPELWNLEKRFGSIIAGAVLSKLSAKREKRGETKGSSEKKKRQRGSF SFQGGMQTLTDTLCKELGKDKLRLKSKVLSLSYSHGEKSALENWSVAYASNPGKQSKDLS FDAVIMTAPLCNVREMKIMKKGNPFLLDFLPEVSYLPLSVIITTFKKENVKRPLEGFGVL VPSKEQQNGLKTLGTLFSSMMFPDRAPNDLYLYTTFIGGSRNRELAKASTDELKQIVTSD LRQLLGAEGEPTFVNHFYWSKAFPLFGHNYDSVLEAIDKMEKDLPGFFYAGNHKGGLSVG KAIASGCKAADLVISYLNSSSDGKMFKE

Transcript Sequence

Transcript ID	VIT_14s0171g00190.t01
Transcript Infomation	cdna chromosome:12X:14:26043720:26051428:-1 gene:VIT_14s0171g00190 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protoporphyrinogen oxidase [Source:UniProtKB/TrEMBL;Acc:D7UBE4]
Sequence	AGACAATCAAATTCTGTCACTGTTATCAGCTGAAAAAATTCTTCAAAAATTGTTCAACGT TTTCCCTTTCGAAGTAATTCAGCATCTATAATGGCTGAGAAATCAGATGCCCAGTCACAC TATAATGGTTCTGGTAAAAGAGTGGCTGTTGTTGGTGCTGGTGTTAGTGGGCTTGCTGCA GCATACAAATTGAAATTACATGGCGTGAACATCACATTATATGAAGCTGAAGAAAGAGCT GGTGGGAAATTAAGAAGTGTTTCACAACATGGTCTAGTTTGGGATGAGGGTGCCAATACA ATGACGGAGAGTGAGATAGAGGTCGGAAGCTTGCTTGATAATCTTAGGCTTCGAGAGAAG CAACAGTTTCCAATTTCACAGAACAAGCGGTATATTGTAAGAAATGGAATGCCTGTCCTG TTACCCTCTAATCCTATTGCGCTGATCAAGAGCAATATCCTGTCAGCAAAATCCAAGTTT CAGATAATTTTGGAGCCATTTTTGTGGAAGAAGAGTGACCTTTCAAAGGTGTCTGATGAT CATATGAAGGAAAGTGTGGGCGGGTTCTTTCAGCGTCATTTCGGGAAAGAGGTTGTTGAT TATTTAATTGACCCTTTTGTGGCGGGTACAAGTGGAGGTGATCCTGAATCACTTTCTATG CATCATACTTTTCCAGAGCTATGGAATCTGGAAAAAAGGTTTGGTTCAATCATAGCTGGG GCAGTTCTGTCCAAGTTATCTGCTAAAAGAGAAAAAAGAGGAGAAACAAAGGGTTCTTCG GAGAAAAAGAAGCGTCAGCGCGGTTCATTTTCCTTCCAGGGTGGAATGCAGACGCTCACT GACACATTATGCAAAGAGCTTGGCAAAGACAAACTTAGACTCAAGTCAAAGGTGTTGTCA TTATCTTACAGTCATGGTGAGAAGTCTGCATTAGAGAATTGGTCAGTTGCTTATGCTTCA AACCCTGGAAAGCAATCAAAAGATTTATCTTTTGATGCTGTTATCATGACAGCTCCTCTC TGTAATGTTCGAGAAATGAAGATCATGAAAAAAGGAAACCCCTTCCTGCTTGACTTTCTT CCTGAGGTGAGTTATTTGCCACTGTCAGTTATAATCACCACCTTTAAAAAGGAGAATGTC AAGAGGCCCCTTGAGGGATTTGGAGTTCTTGTTCCTTCCAAAGAGCAACAAAATGGTTTA AAGACCCTCGGTACACTCTTTTCCTCTATGATGTTTCCAGACCGTGCTCCCAATGACCTA TATCTCTATACTACCTTCATTGGGGGAAGTCGAAACCGGGAACTAGCAAAAGCTTCAACG GATGAGCTCAAGCAGATAGTCACCTCTGACCTTAGACAGTTACTGGGTGCAGAGGGGGAG CCAACATTTGTGAACCATTTCTACTGGAGTAAAGCGTTTCCATTATTTGGGCACAACTAT GATTCAGTTCTAGAAGCCATTGACAAGATGGAAAAAGATCTTCCGGGATTCTTCTATGCA GGTAACCATAAGGGCGGGCTTTCAGTTGGAAAAGCAATAGCCTCTGGGTGCAAAGCAGCT GATCTCGTAATATCCTACCTCAACTCTTCGTCAGATGGTAAGATGTTCAAGGAGTGATGA ACCATTACTGTACACATGGGAAGACAATACACTTGTATTCTCTTCTCTCTGATCTCGAGA ATGTAGTAGTAGATGTTGTATGTATCTGCCTTGCGAAGGAGAATCCAAGAACCGCCCCTT TCCTTCAAGGGGCGAAAGAGAATCCAAAATCTTCTTTCTATGAGTCAAATTCTTCAATCT TCTCTACCTCTGTTATTTACATTGATG