Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_14s0128g00790.t01
CDS Infomation	cds chromosome:12X:14:3318257:3322994:1 gene:VIT_14s0128g00790 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F6HZ11]
Sequence	ATGGATATGATGATGATGATGATGAAGAAGAAGCTTCTTTCAATTGTTAGTGCCATCACT GGGGAAAATGATAAGAAGAAGATCGAGGGAACTATTGTGTTGATGAAGAAGAATGTGTTG GATTTTAATGACTTCAATGCACCGGTTCGGGACCGGGTTCATGAGCTTTTTGGACAGGGA GTCTCTCTGCAGCTCGTCAGTGCTGTTCATGGTGATCCTGCAAATGGGTTACAGGGGAAA ATTGGAAAACCAGCATACTTGGAAGACTGGATTATCACAATCACTTCTTTAACCGCGGGC GAGTCTGCATTCAAGGTCACGTTCGACTGGGATGAGGAGATTGGAGAGCCAGGGGCATTC ATAATTAGAAACAATCACCACAGTGAGTTTTACCTCAGGACTCTCACTCTTGAAGATGTT CCTGGACGTGGCAGAATTCACTTTGTTTGTAATTCCTGGGTCTACCCTGCTCAGCACTAC AAAACTGACCGTGTTTTCTTCACTAATCAGACATATCTTCCAAGTGAAACACCAGGGCCA CTGCGCAAGTACAGAGAAGGGGAACTGGTGAATCTGAGGGGAGATGGAACAGGAAAGCTT AAGGAATGGGATCGAGTGTATGACTATGCTTACTATAATGATTTGGGGAATCCAGACAGG GATCTCAAATACGCCCGCCCTGTGCTGGGAGGATCTGCAGAGTATCCTTATCCCAGGAGG GGAAGAACTGGTAGACCACCATCTGAAAAAGATCCCAACACCGAGAGCAGATTGCCACTT GTGATGAGCTTAAACATGTATGTTCCAAGAGATGAAAGATTTGGTCACCTCAAGATGTCA GACTTCCTGGCTTATGCCCTGAAATCCATAGTTCAATTCCTTCTCCCTGAGTTTGAGGCT CTATGTGACATCACCCACAATGAGTTTGACAGCTTCCAAGATGTATTAGACCTCTACGAA GGAGGAATCAAGGTCCCAGAGGGCCCTTTACTTGACAAAATTAAGGACAACATCCCTCTT GAGATGCTCAAGGAACTTGTTCGTACTGATGGGGAACATCTCTTCAAGTTCCCAATGCCC CAAGTCATCAAAGAGGATAAGTCTGCATGGAGGACAGATGAAGAATTTGCAAGAGAAATG CTGGCTGGACTCAACCCAGTTGTCATCCGTCTACTCCAAGAGTTTCCTCCAAAAAGCAAG CTGGATCCTGAAATTTATGGCAACCAAAACAGTTCAATAACCAAAGAACACATAGAGAAT CACCTGGATGACCTTACTATAAATGAGGCAATGGAGAAGAAAAGGCTATTCATATTAGAT CACCATGATGTTTTCATGCAATACCTGAGGAGGATAAACACAACTTCCACGAAAACTTAT GCCTCAAGGACTCTCCTCTTCCTGAAAGACGACGGAACTTTGAAGCCGCTGGCGATTGAA TTGAGCCTACCACATCCTAGTGGGGATAAATTTGGAGCTGTCAACAAAGTATATACGCCA GCTGAAAATGGTGTTGAAGGTTCCATTTGGCAGCTGGCTAAAGCTTATGCTGCTGTGAAT GACTCTGGCTATCATCAGCTCCTCAGCCACTGGTTGAATACACATGCTGCAATTGAGCCA TTTGTGATTGCAACCAACAGGCAGCTCAGCGTGCTTCATCCAATTCACAAGCTTTTGCAT CCTCACTTCCGTGATACGATGAATATAAATGCATTAGCTCGACAAATCCTCATCAATGCT GGTGGAGTGGTGGAGAGCACAGTTTTTCCATCAAAGTATGCCATGGAAATGTCATCTGTT GTTTACAAAGACTGGGTTCTTACTGAGCAAGCACTTCCTGCTGATCTCATCAAGAGAGGA ATGGCGGTTGAGGATTCAGAGGCCCCTCATGGACTCCGCCTACTGATAGATGACTACCCC TATGCTGTTGATGGACTTGAGATCTGGTCAGCTATTGAGACATGGGTGAAAGAGTATTGC TCATTCTACTACAAGACAGATGAGATGGTCCAGAAAGACTCTGAGCTTCAGTCCTGGTGG AAGGAAGTCAGGGAAGAGGGTCATGGCGACAAGAAGGACGAGCCCTGGTGGCCTAAAATG CATACTGTCAAAGAGCTGATAGAAACATGCACCATTATCATCTGGGTGGCTTCTGCTCTC CATGCTGCAGTGAATTTCGGGCAGTACCCTTATGCAGGCTACCTCCCAAACCGCCCAACG ATAAGCCGCAGATTCATGCCTGAAGAAGGCACTCCTGAGTATGAAGAACTCAAGTCCAAT CCTGATAAGGCTTTCCTGAAAACAATCACTGCCCAGCTGCAGACCCTTCTTGGCATCTCC CTTATTGAGATTCTTTCCAGGCATTCTTCCGATGAGGTTTATCTTGGACAGAGAGACACT CCTGAATGGACCCTGGACACAACACCATTGAAAGCTTTTGAGAAATTCGGAAGGAAGCTG GCAGACATTGAAGAAAGGATCATAGATAGAAATGGAAATGAGAGATTCAAGAACAGAGTT GGGCCTGTGAAGATACCGTACACACTGCTCTACCCCACAAGCGAAGGTGGGATTACTGGC AAAGGGATTCCCAACAGTGTCTCCATCTAA

Peptide Sequence

PEP ID	VIT_14s0128g00790.t01
PEP Infomation	pep chromosome:12X:14:3318257:3322994:1 gene:VIT_14s0128g00790 transcript:VIT_14s0128g00790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F6HZ11]
Sequence	MDMMMMMMKKKLLSIVSAITGENDKKKIEGTIVLMKKNVLDFNDFNAPVRDRVHELFGQG VSLQLVSAVHGDPANGLQGKIGKPAYLEDWIITITSLTAGESAFKVTFDWDEEIGEPGAF IIRNNHHSEFYLRTLTLEDVPGRGRIHFVCNSWVYPAQHYKTDRVFFTNQTYLPSETPGP LRKYREGELVNLRGDGTGKLKEWDRVYDYAYYNDLGNPDRDLKYARPVLGGSAEYPYPRR GRTGRPPSEKDPNTESRLPLVMSLNMYVPRDERFGHLKMSDFLAYALKSIVQFLLPEFEA LCDITHNEFDSFQDVLDLYEGGIKVPEGPLLDKIKDNIPLEMLKELVRTDGEHLFKFPMP QVIKEDKSAWRTDEEFAREMLAGLNPVVIRLLQEFPPKSKLDPEIYGNQNSSITKEHIEN HLDDLTINEAMEKKRLFILDHHDVFMQYLRRINTTSTKTYASRTLLFLKDDGTLKPLAIE LSLPHPSGDKFGAVNKVYTPAENGVEGSIWQLAKAYAAVNDSGYHQLLSHWLNTHAAIEP FVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQILINAGGVVESTVFPSKYAMEMSSV VYKDWVLTEQALPADLIKRGMAVEDSEAPHGLRLLIDDYPYAVDGLEIWSAIETWVKEYC SFYYKTDEMVQKDSELQSWWKEVREEGHGDKKDEPWWPKMHTVKELIETCTIIIWVASAL HAAVNFGQYPYAGYLPNRPTISRRFMPEEGTPEYEELKSNPDKAFLKTITAQLQTLLGIS LIEILSRHSSDEVYLGQRDTPEWTLDTTPLKAFEKFGRKLADIEERIIDRNGNERFKNRV GPVKIPYTLLYPTSEGGITGKGIPNSVSI

Transcript Sequence

Transcript ID	VIT_14s0128g00790.t01
Transcript Infomation	cdna chromosome:12X:14:3318257:3322994:1 gene:VIT_14s0128g00790 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F6HZ11]
Sequence	ATGGATATGATGATGATGATGATGAAGAAGAAGCTTCTTTCAATTGTTAGTGCCATCACT GGGGAAAATGATAAGAAGAAGATCGAGGGAACTATTGTGTTGATGAAGAAGAATGTGTTG GATTTTAATGACTTCAATGCACCGGTTCGGGACCGGGTTCATGAGCTTTTTGGACAGGGA GTCTCTCTGCAGCTCGTCAGTGCTGTTCATGGTGATCCTGCAAATGGGTTACAGGGGAAA ATTGGAAAACCAGCATACTTGGAAGACTGGATTATCACAATCACTTCTTTAACCGCGGGC GAGTCTGCATTCAAGGTCACGTTCGACTGGGATGAGGAGATTGGAGAGCCAGGGGCATTC ATAATTAGAAACAATCACCACAGTGAGTTTTACCTCAGGACTCTCACTCTTGAAGATGTT CCTGGACGTGGCAGAATTCACTTTGTTTGTAATTCCTGGGTCTACCCTGCTCAGCACTAC AAAACTGACCGTGTTTTCTTCACTAATCAGACATATCTTCCAAGTGAAACACCAGGGCCA CTGCGCAAGTACAGAGAAGGGGAACTGGTGAATCTGAGGGGAGATGGAACAGGAAAGCTT AAGGAATGGGATCGAGTGTATGACTATGCTTACTATAATGATTTGGGGAATCCAGACAGG GATCTCAAATACGCCCGCCCTGTGCTGGGAGGATCTGCAGAGTATCCTTATCCCAGGAGG GGAAGAACTGGTAGACCACCATCTGAAAAAGATCCCAACACCGAGAGCAGATTGCCACTT GTGATGAGCTTAAACATGTATGTTCCAAGAGATGAAAGATTTGGTCACCTCAAGATGTCA GACTTCCTGGCTTATGCCCTGAAATCCATAGTTCAATTCCTTCTCCCTGAGTTTGAGGCT CTATGTGACATCACCCACAATGAGTTTGACAGCTTCCAAGATGTATTAGACCTCTACGAA GGAGGAATCAAGGTCCCAGAGGGCCCTTTACTTGACAAAATTAAGGACAACATCCCTCTT GAGATGCTCAAGGAACTTGTTCGTACTGATGGGGAACATCTCTTCAAGTTCCCAATGCCC CAAGTCATCAAAGAGGATAAGTCTGCATGGAGGACAGATGAAGAATTTGCAAGAGAAATG CTGGCTGGACTCAACCCAGTTGTCATCCGTCTACTCCAAGAGTTTCCTCCAAAAAGCAAG CTGGATCCTGAAATTTATGGCAACCAAAACAGTTCAATAACCAAAGAACACATAGAGAAT CACCTGGATGACCTTACTATAAATGAGGCAATGGAGAAGAAAAGGCTATTCATATTAGAT CACCATGATGTTTTCATGCAATACCTGAGGAGGATAAACACAACTTCCACGAAAACTTAT GCCTCAAGGACTCTCCTCTTCCTGAAAGACGACGGAACTTTGAAGCCGCTGGCGATTGAA TTGAGCCTACCACATCCTAGTGGGGATAAATTTGGAGCTGTCAACAAAGTATATACGCCA GCTGAAAATGGTGTTGAAGGTTCCATTTGGCAGCTGGCTAAAGCTTATGCTGCTGTGAAT GACTCTGGCTATCATCAGCTCCTCAGCCACTGGTTGAATACACATGCTGCAATTGAGCCA TTTGTGATTGCAACCAACAGGCAGCTCAGCGTGCTTCATCCAATTCACAAGCTTTTGCAT CCTCACTTCCGTGATACGATGAATATAAATGCATTAGCTCGACAAATCCTCATCAATGCT GGTGGAGTGGTGGAGAGCACAGTTTTTCCATCAAAGTATGCCATGGAAATGTCATCTGTT GTTTACAAAGACTGGGTTCTTACTGAGCAAGCACTTCCTGCTGATCTCATCAAGAGAGGA ATGGCGGTTGAGGATTCAGAGGCCCCTCATGGACTCCGCCTACTGATAGATGACTACCCC TATGCTGTTGATGGACTTGAGATCTGGTCAGCTATTGAGACATGGGTGAAAGAGTATTGC TCATTCTACTACAAGACAGATGAGATGGTCCAGAAAGACTCTGAGCTTCAGTCCTGGTGG AAGGAAGTCAGGGAAGAGGGTCATGGCGACAAGAAGGACGAGCCCTGGTGGCCTAAAATG CATACTGTCAAAGAGCTGATAGAAACATGCACCATTATCATCTGGGTGGCTTCTGCTCTC CATGCTGCAGTGAATTTCGGGCAGTACCCTTATGCAGGCTACCTCCCAAACCGCCCAACG ATAAGCCGCAGATTCATGCCTGAAGAAGGCACTCCTGAGTATGAAGAACTCAAGTCCAAT CCTGATAAGGCTTTCCTGAAAACAATCACTGCCCAGCTGCAGACCCTTCTTGGCATCTCC CTTATTGAGATTCTTTCCAGGCATTCTTCCGATGAGGTTTATCTTGGACAGAGAGACACT CCTGAATGGACCCTGGACACAACACCATTGAAAGCTTTTGAGAAATTCGGAAGGAAGCTG GCAGACATTGAAGAAAGGATCATAGATAGAAATGGAAATGAGAGATTCAAGAACAGAGTT GGGCCTGTGAAGATACCGTACACACTGCTCTACCCCACAAGCGAAGGTGGGATTACTGGC AAAGGGATTCCCAACAGTGTCTCCATCTAAATTTACGCCA