Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_14s0108g01650.t01
CDS Infomation

cds chromosome:12X:14:30193010:30203528:1 gene:VIT_14s0108g01650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCGATCTTCGTCAACGGCTCCGGCGATCGCCCCCTCCCCACCACCACCCACCGCCATG
GTCTACGACCGCCTCGCTGAAGCCGTCAAATCCAAGCTCAAACAGCTTGAGAATCCGGAC
CCTCGATTCCTCAAACATGGGTCACCACACCCAACCCTAAGTGACCATACCAAGATCCTC
TCCGCACCCGAAACCCGTGTCACGACTCTGCCCAACGGTCTCCGAGTCGCCACCGAGTCC
AACCTCGCTGCTCGCACTGCCACCGTTGGAGTCTGGATCGACGCTGGATCGAGGTTCGAG
ACCGACGAGACCAACGGCACCGCTCATTTCCTGGAGCACATGATCTTTAAGGGCACAGCC
CAGAGGACGGCACGAGATCTCGAGGAGGAGATCGAGAACATGGGTGGACACTTGAATGCC
TATACTTCTAGGGAGCAAACCACGTACTATGCCAAGGTTATGGACAAAGATGTGCCTAAG
GCGCTCGACATTTTGTCAGATATCTTGCAGAACTCCAAGTTCGATGAGAATCGGATTAAT
CGCGAGCGTGATGTGATTTTACGCGAAATGGAGGAGGTGGAGGGACAAACTGAGGAAGTT
ATTTTTGATCATTTGCATGCAACTGCATTCCAGTACACTCCCTTGGGCAGAACTATTCTT
GGACCTGCTCAGAATATTAAAACAATCACCAAAGCTCATCTACAGAACTACATATCAACT
CACTACACAGCTCCCAGAATGGTAATTGCTGCTTCTGGAGCTGTTAAGCATGAGGATATT
GTTGAGCAAGTCAAGAAACTATTTACAAAGTTGTCAACAGATCCAACCACAGCTTCTCAA
TTAGTTGTGGAACAGCCTGCAATTTTTACTGGTTCTGAGGTTAGGATGATTGATGATGAT
ATTCCTCTGGCACAATTTGCGGTTGCTTTCAATGGAGCATCATGGACAGATCCAGATTCC
ATTGCTTTGATGGTCATGCAGTCAATGCTGGGTTCATGGAATAAAAATGCGGGAGGTGGA
AAGCACATGGGCTCTGAGCTTGCACAGAGGGTTGGAATTAATGAAATAGCTGAAAGCATG
ATGGCTTTCAATACCAACTATAAAGACACTGGCCTCTTTGGCGTTTATGCTATTGCTAAG
CCGGATTGCTTGGACGATTTGGCCTATGCAATTATGTATGAAATAAGCAAGCTATGTTAT
CGAGTTTCAGAAGCTGACGTTACTCGTGCTCGTAATCAGTTGAAATCTTCTCTGCTGCTT
CACATTGATGGAACCAGTCCTGTAGCTGAAGATATAGGCCGCCAGCTGCTTACATACGGC
CGGAGAATCCCATTTGCTGAATTATTTGCTAGGATTGATGCTGTTGATGCAAGTACTGTC
AAACGTGTTGCAAATCGGTTTATATTTGACAGGGATGTTGCAATTGCAGCAATGGGGCCT
ATCCAAGGTTTACCTGACTACAACTGGTTCAGACGCAGGACCTACTGGCTCCGTTACTAG

Peptide Sequence

PEP ID

VIT_14s0108g01650.t01
PEP Infomation

pep chromosome:12X:14:30193010:30203528:1 gene:VIT_14s0108g01650 transcript:VIT_14s0108g01650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRSSSTAPAIAPSPPPPTAMVYDRLAEAVKSKLKQLENPDPRFLKHGSPHPTLSDHTKIL
SAPETRVTTLPNGLRVATESNLAARTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTA
QRTARDLEEEIENMGGHLNAYTSREQTTYYAKVMDKDVPKALDILSDILQNSKFDENRIN
RERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKAHLQNYIST
HYTAPRMVIAASGAVKHEDIVEQVKKLFTKLSTDPTTASQLVVEQPAIFTGSEVRMIDDD
IPLAQFAVAFNGASWTDPDSIALMVMQSMLGSWNKNAGGGKHMGSELAQRVGINEIAESM
MAFNTNYKDTGLFGVYAIAKPDCLDDLAYAIMYEISKLCYRVSEADVTRARNQLKSSLLL
HIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDAVDASTVKRVANRFIFDRDVAIAAMGP
IQGLPDYNWFRRRTYWLRY

Transcript Sequence

Transcript ID

VIT_14s0108g01650.t01
Transcript Infomation

cdna chromosome:12X:14:30193010:30203528:1 gene:VIT_14s0108g01650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCCCCGTTTCTCTTGGCCAACCAAACCCTAGCCATGGCGTGGAAGCAGCTCCTAACCCT
AGCTCCTCGTTCCCACAGACGCATCCCATACTCCATCACCCAAACCATGCGATCTTCGTC
AACGGCTCCGGCGATCGCCCCCTCCCCACCACCACCCACCGCCATGGTCTACGACCGCCT
CGCTGAAGCCGTCAAATCCAAGCTCAAACAGCTTGAGAATCCGGACCCTCGATTCCTCAA
ACATGGGTCACCACACCCAACCCTAAGTGACCATACCAAGATCCTCTCCGCACCCGAAAC
CCGTGTCACGACTCTGCCCAACGGTCTCCGAGTCGCCACCGAGTCCAACCTCGCTGCTCG
CACTGCCACCGTTGGAGTCTGGATCGACGCTGGATCGAGGTTCGAGACCGACGAGACCAA
CGGCACCGCTCATTTCCTGGAGCACATGATCTTTAAGGGCACAGCCCAGAGGACGGCACG
AGATCTCGAGGAGGAGATCGAGAACATGGGTGGACACTTGAATGCCTATACTTCTAGGGA
GCAAACCACGTACTATGCCAAGGTTATGGACAAAGATGTGCCTAAGGCGCTCGACATTTT
GTCAGATATCTTGCAGAACTCCAAGTTCGATGAGAATCGGATTAATCGCGAGCGTGATGT
GATTTTACGCGAAATGGAGGAGGTGGAGGGACAAACTGAGGAAGTTATTTTTGATCATTT
GCATGCAACTGCATTCCAGTACACTCCCTTGGGCAGAACTATTCTTGGACCTGCTCAGAA
TATTAAAACAATCACCAAAGCTCATCTACAGAACTACATATCAACTCACTACACAGCTCC
CAGAATGGTAATTGCTGCTTCTGGAGCTGTTAAGCATGAGGATATTGTTGAGCAAGTCAA
GAAACTATTTACAAAGTTGTCAACAGATCCAACCACAGCTTCTCAATTAGTTGTGGAACA
GCCTGCAATTTTTACTGGTTCTGAGGTTAGGATGATTGATGATGATATTCCTCTGGCACA
ATTTGCGGTTGCTTTCAATGGAGCATCATGGACAGATCCAGATTCCATTGCTTTGATGGT
CATGCAGTCAATGCTGGGTTCATGGAATAAAAATGCGGGAGGTGGAAAGCACATGGGCTC
TGAGCTTGCACAGAGGGTTGGAATTAATGAAATAGCTGAAAGCATGATGGCTTTCAATAC
CAACTATAAAGACACTGGCCTCTTTGGCGTTTATGCTATTGCTAAGCCGGATTGCTTGGA
CGATTTGGCCTATGCAATTATGTATGAAATAAGCAAGCTATGTTATCGAGTTTCAGAAGC
TGACGTTACTCGTGCTCGTAATCAGTTGAAATCTTCTCTGCTGCTTCACATTGATGGAAC
CAGTCCTGTAGCTGAAGATATAGGCCGCCAGCTGCTTACATACGGCCGGAGAATCCCATT
TGCTGAATTATTTGCTAGGATTGATGCTGTTGATGCAAGTACTGTCAAACGTGTTGCAAA
TCGGTTTATATTTGACAGGGATGTTGCAATTGCAGCAATGGGGCCTATCCAAGGTTTACC
TGACTACAACTGGTTCAGACGCAGGACCTACTGGCTCCGTTACTAGATTATTTTCACATT
TCTTCAGTATTCCATCAGTCTCACCCCCACAGATGGTTTGATAAACTGTCTAATTTTACA
TTACCAATATCCTTGCAGAGCCATTAAGGGCCGGTATTTTTGTTGATTATTTTCCATGCT
TTTGTTTCTGTAATACCCCACAATTCGGTCGGAAATAAATAAGCTGTCTTCAACA