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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_14s0108g01020.t01
CDS Infomation

cds chromosome:12X:14:29649238:29650647:-1 gene:VIT_14s0108g01020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5BA94]
Sequence

ATGGCTCTTCTCGGGTTTCTGTTGGTGGGCATTCTCTCAATGGTCTCAGCTGTGAATGGG
TATTATGGTGGTTGGATTAATGCTCATGCCACCTTCTATGGAGGTGGTGATGCTTCTGGG
ACAATGGGTGGAGCTTGTGGATATGGAAACCTGTACAGCCAGGGGTATGGGACCAACACT
GCAGCATTGAGCACAGCTCTTTTCAACAATGGCCTCAGCTGTGGCGCCTGTTTTGAGCTT
AGGTGTGTGAATGATCCCCAGTGGTGCCTCCCTGGCACCATTGTCGTCACTGCCACTAAC
TTCTGCCCACCAGGAGGCTGGTGTGATCCTCCCCAGCAACACTTTGATCTCTCTCAGCCT
GTCTTCCAACACATTGCTCAGTACAGAGCTGGGATTGTCCCTGTCGCTTACAGAAGGGTT
TCCTGCAGAAAATCAGGAGGCATCAGGTTCACCGTCAATGGCCATTCCTACTTCAATCTT
GTCCTCGTCACCAACGTGGGGGGCGCCGGCGATGTCCATGCTGTTTCCATCAAGGGTTCA
AGAACTGCCTGGCAGCCTATGTCAAGGAACTGGGGCCAAAACTGGCAAAGCAACTCCTAC
CTCAATGGCCAAAGCCTCTCCTTCAGAGTAGTCACCAGCGATGGCCGCGCCATAGTCTCC
TACAATGTTGCCCCTGCAGGCTGGTCCTTTGGCCAGACCTACACTGGAGGCCAATTCCGC
TAG

Peptide Sequence

PEP ID

VIT_14s0108g01020.t01
PEP Infomation

pep chromosome:12X:14:29649238:29650647:-1 gene:VIT_14s0108g01020 transcript:VIT_14s0108g01020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5BA94]
Sequence

MALLGFLLVGILSMVSAVNGYYGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTNT
AALSTALFNNGLSCGACFELRCVNDPQWCLPGTIVVTATNFCPPGGWCDPPQQHFDLSQP
VFQHIAQYRAGIVPVAYRRVSCRKSGGIRFTVNGHSYFNLVLVTNVGGAGDVHAVSIKGS
RTAWQPMSRNWGQNWQSNSYLNGQSLSFRVVTSDGRAIVSYNVAPAGWSFGQTYTGGQFR

Transcript Sequence

Transcript ID

VIT_14s0108g01020.t01
Transcript Infomation

cdna chromosome:12X:14:29649238:29650647:-1 gene:VIT_14s0108g01020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5BA94]
Sequence

TTTGCAGGAAAATGGCTCTTCTCGGGTTTCTGTTGGTGGGCATTCTCTCAATGGTCTCAG
CTGTGAATGGGTATTATGGTGGTTGGATTAATGCTCATGCCACCTTCTATGGAGGTGGTG
ATGCTTCTGGGACAATGGGTGGAGCTTGTGGATATGGAAACCTGTACAGCCAGGGGTATG
GGACCAACACTGCAGCATTGAGCACAGCTCTTTTCAACAATGGCCTCAGCTGTGGCGCCT
GTTTTGAGCTTAGGTGTGTGAATGATCCCCAGTGGTGCCTCCCTGGCACCATTGTCGTCA
CTGCCACTAACTTCTGCCCACCAGGAGGCTGGTGTGATCCTCCCCAGCAACACTTTGATC
TCTCTCAGCCTGTCTTCCAACACATTGCTCAGTACAGAGCTGGGATTGTCCCTGTCGCTT
ACAGAAGGGTTTCCTGCAGAAAATCAGGAGGCATCAGGTTCACCGTCAATGGCCATTCCT
ACTTCAATCTTGTCCTCGTCACCAACGTGGGGGGCGCCGGCGATGTCCATGCTGTTTCCA
TCAAGGGTTCAAGAACTGCCTGGCAGCCTATGTCAAGGAACTGGGGCCAAAACTGGCAAA
GCAACTCCTACCTCAATGGCCAAAGCCTCTCCTTCAGAGTAGTCACCAGCGATGGCCGCG
CCATAGTCTCCTACAATGTTGCCCCTGCAGGCTGGTCCTTTGGCCAGACCTACACTGGAG
GCCAATTCCGCTAGAAAATCAAACTAAGTTAAAAACTTTTAGCAGGTTTTTCACCATATA
AATAAATATAAAGATTGCTATATATATATATATATATATATATGCTGATATTTATATGCC
TAAGCTAAGGGTATGGCATAAAGACTAAGGTTGGATAAAGCAAATGTATAGTAAAATAGC
TTCATATATGTAAAAAATGAAAAGGGTCAATTTTGAATGGCCCTTTTTTCCATTGTAATT
TGCTTGTGGCTTTTTGCAGTTCATGGCTGGCTTTGTGCTGAAAGCCCCTGCCACTGCTGA
GGAGGTAGACGTTAATTTTATTATCAGTAAATGTTCCCTACTAAATGCTCTAGTAAAGAG
TGTTTTTGCTTAGTCTATGTGAGGTCATTGTAATGCATATGACTTTGTTGTACTTGAGCC
ATTATGAGAATGTGAAAGTGAAAATCTTCAATTTGGTTAATGATA