Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_14s0108g00540.t01
CDS Infomation

cds chromosome:12X:14:29296525:29300610:1 gene:VIT_14s0108g00540 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent 6-phosphofructokinase [Source:UniProtKB/TrEMBL;Acc:D7SXA1]
Sequence

ATGGCTACAATTGCTGCTGGAAATCAAGAAATGGACTTCACTGATCCCTGTTGGAAGACC
AAATTTCAAGAGGATTTCGAGTTGAGATTTAATTTGCCTCACCTTAAGGATGTATTGCCC
ATAAAGCCAAGGCCTACGACGTTTTCCCTGAAAAATAGAAATGCTCGATTAGTGAATGGC
GCCAATGTGCTTGAGGATCGGAAAAATGGTTATGTTAATGAGGATGATAGAGCACTTCTA
AAGGTTATCAGATATTCTTCACCAACTTCTGCTGGAGCTGAGTGCATTGATCCTGATTGC
AGCTGGGTGGAGCAATGGGTACATCGTGCTGGGCCACGTGAGGAGATATTCTTTGAGCCT
GGGGAAGTGAAAGCTGGAATTGTTACCTGTGGAGGGCTCTGTCCTGGTCTCAATGATGTC
ATTAGACAGATTGTTTTCACTCTGGAACTCTATGGGGTTAAGAAGATTGTTGGAATCCAG
TATGGTTATCGTGGACTTTTTGATCGGGGCTTAGCTGAAATAGAGCTTTTCCGTGAAGTG
GTTCAAAACATTAATCTTGCCGGTGGAAGTCTGCTTGGAGTTTCCCGTGGAGGTGCTGAT
ATCAGTGAGATTGTAGATAGCATACAGGCCAGGGGAATTGATATGATTTTCATACTTGGG
GGCAATGGTACACATGCAGGAGCAAATGCAATACACAACGAGTGCCGCAGGAGGAAGATG
AAAGTATCGGTTATATGTGTTCCAAAAACAATTGATAATGATATTCTGTTAATGGATAAA
ACCTTTGGATTTGATACTGCTGTAGAAGAAGCTCAAAGGGCTATTAATTCTGCATATATT
GAGGCTCGTAGTGCATATCATGGCATCGGGCTTGTAAAACTGATGGGAAGAAGCAGCGGC
TTTATAGCAATGCACGCTTCGCTTTCAAGCGGTCAGATTGATATCTGTTTGATTCCAGAG
GTACCATTTCAAATTGAGGGACCTTATGGTGTCTTACGACATTTAGAGCATCTCATAGAG
ACTAAAGGGTCAGCTGTGCTCTGTGTGGCTGAAGGAGCAGGACAAGATTTTGTAGAAAAG
ACGAATTCGACGGATGCATCTGGGAATGCGAGACTTGGAGACATTGGTGTTTATCTCCAA
CAGCAGATCAAGAAACATTTTAGGAGGATTGGCGTTCCAGCTGATGTTAAATACATTGAT
CCCACTTATATGATTCGAGCGTGTCGAGCAAATGCATCTGATGCTGTTCTTTGCACTGTT
CTTGGCCAGAATGCTGTCCATGGAGCATTTGCAGGGTTCAGTGGAATCACTGTTGGAATA
TGTAACAGCCACTACGTCTACTTACCAATCCCGGAAGTGATCGCCTCTCCAAGAGTCGTC
GATCCAGACAGCCGGATGTGGCACCGGTGCCTGACTTCCACCGGCCAGCCGGACTTCAAC
TGA

Peptide Sequence

PEP ID

VIT_14s0108g00540.t01
PEP Infomation

pep chromosome:12X:14:29296525:29300610:1 gene:VIT_14s0108g00540 transcript:VIT_14s0108g00540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent 6-phosphofructokinase [Source:UniProtKB/TrEMBL;Acc:D7SXA1]
Sequence

MATIAAGNQEMDFTDPCWKTKFQEDFELRFNLPHLKDVLPIKPRPTTFSLKNRNARLVNG
ANVLEDRKNGYVNEDDRALLKVIRYSSPTSAGAECIDPDCSWVEQWVHRAGPREEIFFEP
GEVKAGIVTCGGLCPGLNDVIRQIVFTLELYGVKKIVGIQYGYRGLFDRGLAEIELFREV
VQNINLAGGSLLGVSRGGADISEIVDSIQARGIDMIFILGGNGTHAGANAIHNECRRRKM
KVSVICVPKTIDNDILLMDKTFGFDTAVEEAQRAINSAYIEARSAYHGIGLVKLMGRSSG
FIAMHASLSSGQIDICLIPEVPFQIEGPYGVLRHLEHLIETKGSAVLCVAEGAGQDFVEK
TNSTDASGNARLGDIGVYLQQQIKKHFRRIGVPADVKYIDPTYMIRACRANASDAVLCTV
LGQNAVHGAFAGFSGITVGICNSHYVYLPIPEVIASPRVVDPDSRMWHRCLTSTGQPDFN

Transcript Sequence

Transcript ID

VIT_14s0108g00540.t01
Transcript Infomation

cdna chromosome:12X:14:29296525:29300610:1 gene:VIT_14s0108g00540 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent 6-phosphofructokinase [Source:UniProtKB/TrEMBL;Acc:D7SXA1]
Sequence

CTACCTTCTCCCGATTTTCCCAAGAAATTCGGAAACTTTGAGGAAATCTCAATGGTGGCT
CTGCGTGTAGCTCTATGTTAAGTGTCAATGGAATTAGGCATTAACATAAATAAAGTCAGA
TAAAGTTGTGGGCGTAATCTCATTTCTTTGATCTCTCTCTGATTCAGAGAATATTTTTTT
GAGGGGTTGGATAACTGGATGATCTTATCTGCTGCTACAAATTAATTGGGTTGGTTTGAG
AAATGGCTTCTGCTTCTTTGATCTATGCTGTTAATTTTATCAACCCTCCAAAATGTATTT
TGCATTCAAAAAGGGATTATTTTTCTTTCAATATGAGTTATACTTGTACAAAATCCAAAA
CCTCACAAAGACAGATGAGAAATAAGCAATCAAGAATGGCTACAATTGCTGCTGGAAATC
AAGAAATGGACTTCACTGATCCCTGTTGGAAGACCAAATTTCAAGAGGATTTCGAGTTGA
GATTTAATTTGCCTCACCTTAAGGATGTATTGCCCATAAAGCCAAGGCCTACGACGTTTT
CCCTGAAAAATAGAAATGCTCGATTAGTGAATGGCGCCAATGTGCTTGAGGATCGGAAAA
ATGGTTATGTTAATGAGGATGATAGAGCACTTCTAAAGGTTATCAGATATTCTTCACCAA
CTTCTGCTGGAGCTGAGTGCATTGATCCTGATTGCAGCTGGGTGGAGCAATGGGTACATC
GTGCTGGGCCACGTGAGGAGATATTCTTTGAGCCTGGGGAAGTGAAAGCTGGAATTGTTA
CCTGTGGAGGGCTCTGTCCTGGTCTCAATGATGTCATTAGACAGATTGTTTTCACTCTGG
AACTCTATGGGGTTAAGAAGATTGTTGGAATCCAGTATGGTTATCGTGGACTTTTTGATC
GGGGCTTAGCTGAAATAGAGCTTTTCCGTGAAGTGGTTCAAAACATTAATCTTGCCGGTG
GAAGTCTGCTTGGAGTTTCCCGTGGAGGTGCTGATATCAGTGAGATTGTAGATAGCATAC
AGGCCAGGGGAATTGATATGATTTTCATACTTGGGGGCAATGGTACACATGCAGGAGCAA
ATGCAATACACAACGAGTGCCGCAGGAGGAAGATGAAAGTATCGGTTATATGTGTTCCAA
AAACAATTGATAATGATATTCTGTTAATGGATAAAACCTTTGGATTTGATACTGCTGTAG
AAGAAGCTCAAAGGGCTATTAATTCTGCATATATTGAGGCTCGTAGTGCATATCATGGCA
TCGGGCTTGTAAAACTGATGGGAAGAAGCAGCGGCTTTATAGCAATGCACGCTTCGCTTT
CAAGCGGTCAGATTGATATCTGTTTGATTCCAGAGGTACCATTTCAAATTGAGGGACCTT
ATGGTGTCTTACGACATTTAGAGCATCTCATAGAGACTAAAGGGTCAGCTGTGCTCTGTG
TGGCTGAAGGAGCAGGACAAGATTTTGTAGAAAAGACGAATTCGACGGATGCATCTGGGA
ATGCGAGACTTGGAGACATTGGTGTTTATCTCCAACAGCAGATCAAGAAACATTTTAGGA
GGATTGGCGTTCCAGCTGATGTTAAATACATTGATCCCACTTATATGATTCGAGCGTGTC
GAGCAAATGCATCTGATGCTGTTCTTTGCACTGTTCTTGGCCAGAATGCTGTCCATGGAG
CATTTGCAGGGTTCAGTGGAATCACTGTTGGAATATGTAACAGCCACTACGTCTACTTAC
CAATCCCGGAAGTGATCGCCTCTCCAAGAGTCGTCGATCCAGACAGCCGGATGTGGCACC
GGTGCCTGACTTCCACCGGCCAGCCGGACTTCAACTGATTCTCTCATACCACAATTTTCC
ATTTCAACCTTATTTCAACTGCATAGAGCCAGTGTCAAACAAAAAATTCTCATTTTTCCC
CTTGCCCATTTGTAATTTCTTCGTTTTTTCCCCATGTCGAATGCGGATCTTGGTTGAAGG
GTCC