Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_14s0108g00030.t01
CDS Infomation	cds chromosome:12X:14:28869048:28870986:1 gene:VIT_14s0108g00030 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A5ACS2]
Sequence	ATGGGGGCATATAAGTTCAGTAGTCTTTTGTTGTTGTCTTTCTTTGCATTTGCTGTGTTG GCTCCGTCGATTCGAGCCCACATCGGAGAATTTGATGAGGTGTGGCAGAAGCGAGCTGAG GAGGCCCAGAAGGCTGCATTGGAGGCCTATCAACCGAACCCGGAAGAGGTCACCAACCAG TTCAACAAGAATGTCCGCAAGTCCATGCAGGGAACCAACACAACGAGGAGGAACTTGAGG AGTAACAATGGTCCATGCATGGCCACGAACCCTATCGACAGGTGCTGGAGATGCAAGCAG GACTGGGCTAAAAACCGAAAGAAGCTAGCTGACTGTGTGCTGGGGTTCGGGCGCAGGACT ACAGGAGGAAAGGATGGAGAATTCTATGTGGTAACTGATGCCTCAGACAATGACATGATC GACCCAAAACCCGGTACTCTTCGCCATGCTGTGATCCAGAAGGAGCCACTGTGGATCATA TTTGCCCGCGACATGATAATAAGGTTGAAACAGGAGCTGATCATGGCTGGCAACAAGACC ATCGATGGCCGTGGGGCTAATGTTCACATTGCATATGGTTGTGGCATTACTATACAGTTT GTGAAGAATATCATCATCCATAACCTCCATATACATGACATTGTTCCTGCTCAAGGTGGG ATGATTAGAGACTCTGTAGATCATTATGGCCTCAGAACTGCCAGTGATGGAGATGGGGTT TCGATATTCGGCTCATCCAACGTCTGGGTGGATCATCTCTCCATGTCCAACTGCAAGGAT GGGCTTGTTGATGTGATCATGGCATCCACAGCCATCACCATTTCAAACTGCCATTTCACT AATCACAATGAGGTGATGCTGTTTGGTGGCAGCAATAATTTCCAGGGCGATAAGATCATG CAAGTGACAGTGGCATTCAACCATTATGGAAGAGGACTAGTCCAGAGAATGCCAAGATGC AGATATGGCTTCGTCCATGTTGTCAACAACGATTACACTCACTGGCTCATGTATGCCATT GGTGGTAGCCAGAACCCCACCATCATAAGCCAGGGGAACCGGTTCATCGCCCCTCCAAAT ATGGCTTGCAAGGAGGTAACCAAGAGGGACTATGCAAGCCCAGATGAGTGGAAATCTTGG ACATGGATCTCACAAGGGGATCTGCTACAAAACGGAGCATTCTTTGTTCAGTCTGGAGAC CCTAAAAAGAAGCATCCATTCACCAGGTACGACATGATAAAGGCGAAGCCTGGCACATTT GTTAACAGGCTCACTCGCTTTTCGGGGTCGCTGGGCTGCAAGGTGAACCAACCATGTTAG

Peptide Sequence

PEP ID	VIT_14s0108g00030.t01
PEP Infomation	pep chromosome:12X:14:28869048:28870986:1 gene:VIT_14s0108g00030 transcript:VIT_14s0108g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A5ACS2]
Sequence	MGAYKFSSLLLLSFFAFAVLAPSIRAHIGEFDEVWQKRAEEAQKAALEAYQPNPEEVTNQ FNKNVRKSMQGTNTTRRNLRSNNGPCMATNPIDRCWRCKQDWAKNRKKLADCVLGFGRRT TGGKDGEFYVVTDASDNDMIDPKPGTLRHAVIQKEPLWIIFARDMIIRLKQELIMAGNKT IDGRGANVHIAYGCGITIQFVKNIIIHNLHIHDIVPAQGGMIRDSVDHYGLRTASDGDGV SIFGSSNVWVDHLSMSNCKDGLVDVIMASTAITISNCHFTNHNEVMLFGGSNNFQGDKIM QVTVAFNHYGRGLVQRMPRCRYGFVHVVNNDYTHWLMYAIGGSQNPTIISQGNRFIAPPN MACKEVTKRDYASPDEWKSWTWISQGDLLQNGAFFVQSGDPKKKHPFTRYDMIKAKPGTF VNRLTRFSGSLGCKVNQPC

Transcript Sequence

Transcript ID	VIT_14s0108g00030.t01
Transcript Infomation	cdna chromosome:12X:14:28869048:28870986:1 gene:VIT_14s0108g00030 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A5ACS2]
Sequence	ATGGGGGCATATAAGTTCAGTAGTCTTTTGTTGTTGTCTTTCTTTGCATTTGCTGTGTTG GCTCCGTCGATTCGAGCCCACATCGGAGAATTTGATGAGGTGTGGCAGAAGCGAGCTGAG GAGGCCCAGAAGGCTGCATTGGAGGCCTATCAACCGAACCCGGAAGAGGTCACCAACCAG TTCAACAAGAATGTCCGCAAGTCCATGCAGGGAACCAACACAACGAGGAGGAACTTGAGG AGTAACAATGGTCCATGCATGGCCACGAACCCTATCGACAGGTGCTGGAGATGCAAGCAG GACTGGGCTAAAAACCGAAAGAAGCTAGCTGACTGTGTGCTGGGGTTCGGGCGCAGGACT ACAGGAGGAAAGGATGGAGAATTCTATGTGGTAACTGATGCCTCAGACAATGACATGATC GACCCAAAACCCGGTACTCTTCGCCATGCTGTGATCCAGAAGGAGCCACTGTGGATCATA TTTGCCCGCGACATGATAATAAGGTTGAAACAGGAGCTGATCATGGCTGGCAACAAGACC ATCGATGGCCGTGGGGCTAATGTTCACATTGCATATGGTTGTGGCATTACTATACAGTTT GTGAAGAATATCATCATCCATAACCTCCATATACATGACATTGTTCCTGCTCAAGGTGGG ATGATTAGAGACTCTGTAGATCATTATGGCCTCAGAACTGCCAGTGATGGAGATGGGGTT TCGATATTCGGCTCATCCAACGTCTGGGTGGATCATCTCTCCATGTCCAACTGCAAGGAT GGGCTTGTTGATGTGATCATGGCATCCACAGCCATCACCATTTCAAACTGCCATTTCACT AATCACAATGAGGTGATGCTGTTTGGTGGCAGCAATAATTTCCAGGGCGATAAGATCATG CAAGTGACAGTGGCATTCAACCATTATGGAAGAGGACTAGTCCAGAGAATGCCAAGATGC AGATATGGCTTCGTCCATGTTGTCAACAACGATTACACTCACTGGCTCATGTATGCCATT GGTGGTAGCCAGAACCCCACCATCATAAGCCAGGGGAACCGGTTCATCGCCCCTCCAAAT ATGGCTTGCAAGGAGGTAACCAAGAGGGACTATGCAAGCCCAGATGAGTGGAAATCTTGG ACATGGATCTCACAAGGGGATCTGCTACAAAACGGAGCATTCTTTGTTCAGTCTGGAGAC CCTAAAAAGAAGCATCCATTCACCAGGTACGACATGATAAAGGCGAAGCCTGGCACATTT GTTAACAGGCTCACTCGCTTTTCGGGGTCGCTGGGCTGCAAGGTGAACCAACCATGTTAG CACTGATAAGAGGATGAAACGCACAGGAGGAGAGGAAGATGAGGTGTAGAGAGCCAAGAC CAAGTGAATTGTGGGGTGGGGGAGAGAATTTCATTTGGTCCAATTCCTCCGCCCATCTTA TGGGGTATCATTTATTATTACAATATTACTTGATTATGTATGTAATTACTAATTAGTTGT GGAGCATCTAATCTGTGGTACAAGCGCACAGATGAGAGTTTTAAATTTGTAACTCCTTTC TTTTCCTACTTCAATAACTCTGACAATATGAATTGTAAATCCAAGTTTAGCCACCACA