Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_14s0083g00880.t01
CDS Infomation

cds chromosome:12X:14:23082779:23088930:-1 gene:VIT_14s0083g00880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTCGTGATCTGGACAGCCCTTTACAAACTCAGATGGCAGTTGCAACCATCAAAGGA
ACCAGTTGTGATTGCCTTGAAAATAAGAGGATGGAAAGAAAACCTTCTGCAAGAAGACGT
GTTTTTGTTCAAACTGAAACTGGCAGTGTGTTGGGCATAGAGTTAGACAGGAGTGACAAT
GCATATACAGTGAAGAAGAGATTGCAGCTTGCCCTCAATATCCCAACTGAAGAAAGCTCA
TTGACATATGGGGATACAGTATTAAAGAATGATCTAAGTGCTGTTAGACATGATTCTCCA
CTTCTTCTTACAAGGAAATTCTTGCACAGAAGCTCATCTACGCCATGTCTCTCACCCACT
GGTCGGGATCTTCAGCAGAGAGATCAGAGTGGTCCAATTGAGATATTGGGGTGCTCAAAT
TACTTTGCTCCAACAAAGTTATTGGTGAAGGACATTGTGAAGGCAATAGAGAATGGTATT
GATCCAATTCCTGTTTGTAGTGGGCTTGGAGGTTCATACTATTTTAGAAATTGTAATGGT
GAGAATGTTGCCATTGTGAAGCCAACAGATGAGGAGCCTTTTGCCCCAAACAACCCAAAG
GGTTGGGTGGGGAAAACCCTTGGGCAACCAGGCCTGAAACGTTCAGTGAGGGTTGGGGAG
ACAGGTTTTAGAGAAGTGGCAGCTTACCTTCTTGACTATGATCATTTTTCCAATGTGCCA
TCTACTGCCCTTGTAAAGATTACACACTCAATTTTCAATGTCAATGATAGAGTCAGCAAG
ATTGCCTCATTGCAGCAGTTCATCCAGCATGATTTTGATGCTAGTGATCATGGTACTTCT
AGCTTCACTGTTTCTGCTGTACATAGGATTGGGATTTTAGATATTCGGATTTTAAACACA
GACAGGCATGCAGGAAACCTTTTAGTCAGGAAGCTTGACGGGTTTGAGAAGTTTGGTCAG
GTGGAGCTTGTTCCTATTGACCATGGGCTTTGTCTTCCAGAAAGCTTAGAGGATCCATAC
TTTGAGTGGATCCATTGGCCACAGGCATCTATTCCTTTCTCTGAGGATGAGCTAGAATAT
ATTGATAATCTTGACCCTATTCATGATTCTGATATGCTGCGAATGGAGTTGCCCATGATT
CGAGAGGCATGCCTCCGAGTTTTGGTTCTTTGCACCACTTTCCTTAAGGAAGCAGCAGCA
TTTGGTCTATGTCTTGCTGAGATTGGTGAAATGATGAGTAGGGAGTTTCAGGCCCATAAG
GGGGATCCAAGTGAGCTTGAGGTTATATGCATTGAGGCACGAAGGCAGTTAGAGGAGATG
GAGGTGTTGGCTTTGGAAAGGAAAGTAAGAGAAGAGGAGTTTCAGTTTGATATGGATTGT
GAAGATGAGGAATTTGATTTGATCCCTAGTAAGGAAGAGAAATTGGTGACTAAAACTACC
TCTCATTTTGGGTTCACAAGTGCTAATGGGCGAAATCCACTTTCTAAGTTGGAGGAGAAT
GTTGAGGAGGAGGCAGCAGCAGAGATTGAGGGGAATGGCATGCTCTCCCAAGTGGAGGGG
AGCCAGGTTCCAAGTGCTTTGAAGTTGTCCTTGTCACTGGAAAACACAAAGGTTGGTAAG
AAGACTTGGCAACACCAGGGTGCAATGTTAAAAGATGGTTGCTTGGCTGGTCCATCTTCT
GGAAACTGGAGTGTCAATGAGCAGTTGCCTGCAAGCACAAGTTTTGAGCTGACAGATATC
AATGGAGAGGATTGGACACAGTTCCTTGAAATTTTCCAGAAGTTGCTGCGCCCAGCTTTT
GCTACTCGTAAATCTACAAGTTTAGGTCAGAGGCAAAGGCAGAGGCTTGGAACTTCATGC
CAGTTTTGA

Peptide Sequence

PEP ID

VIT_14s0083g00880.t01
PEP Infomation

pep chromosome:12X:14:23082779:23088930:-1 gene:VIT_14s0083g00880 transcript:VIT_14s0083g00880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSRDLDSPLQTQMAVATIKGTSCDCLENKRMERKPSARRRVFVQTETGSVLGIELDRSDN
AYTVKKRLQLALNIPTEESSLTYGDTVLKNDLSAVRHDSPLLLTRKFLHRSSSTPCLSPT
GRDLQQRDQSGPIEILGCSNYFAPTKLLVKDIVKAIENGIDPIPVCSGLGGSYYFRNCNG
ENVAIVKPTDEEPFAPNNPKGWVGKTLGQPGLKRSVRVGETGFREVAAYLLDYDHFSNVP
STALVKITHSIFNVNDRVSKIASLQQFIQHDFDASDHGTSSFTVSAVHRIGILDIRILNT
DRHAGNLLVRKLDGFEKFGQVELVPIDHGLCLPESLEDPYFEWIHWPQASIPFSEDELEY
IDNLDPIHDSDMLRMELPMIREACLRVLVLCTTFLKEAAAFGLCLAEIGEMMSREFQAHK
GDPSELEVICIEARRQLEEMEVLALERKVREEEFQFDMDCEDEEFDLIPSKEEKLVTKTT
SHFGFTSANGRNPLSKLEENVEEEAAAEIEGNGMLSQVEGSQVPSALKLSLSLENTKVGK
KTWQHQGAMLKDGCLAGPSSGNWSVNEQLPASTSFELTDINGEDWTQFLEIFQKLLRPAF
ATRKSTSLGQRQRQRLGTSCQF

Transcript Sequence

Transcript ID

VIT_14s0083g00880.t01
Transcript Infomation

cdna chromosome:12X:14:23082779:23088930:-1 gene:VIT_14s0083g00880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTTAGAAAAGCTCGAAAGCGGGAGAGAGAGGGAGGGGACAACTGATAGAGACGGAGAGG
GATCTGGGGTCTGTGCCATCATAGCCGTCGATTCGTTTGACATTCCGAATTACGGCCGCC
GGTTCTCGATTTCCCGTCATCTCCCCGCCTCTCCGTCTTCCGTTTCTTGATCTCTCAGTT
GTGATGCTAAAAGATTAACAAAATATTTCTTTAAGTCTCCATGATGCCAAAGAATGTGTG
GGCGATTCCTAGGACTGATGCTTGGTCATTGTTAGCTCTTGCAGAAGCCTGAAAAGGTGG
CCACCAATGTAGCAATTTAACTAAGTTCCGTAGTCTGCTTCATAGTGATTATCTATTTCA
ATGTGGGCATCACAGAAAATTCAAATTCCAATGCGTTGGTTATGATTGTTTGGGACATAA
AACTCTCTCCTTCAAACACTACTGGTATATGAGTTTGGGAGAGGGAAGCCCTTTGCTGCT
GCCACCACTTCTGCCTCTGCCTCTGCCTGTGCGCCTTTTCCTTACCATGTCTCGTGATCT
GGACAGCCCTTTACAAACTCAGATGGCAGTTGCAACCATCAAAGGAACCAGTTGTGATTG
CCTTGAAAATAAGAGGATGGAAAGAAAACCTTCTGCAAGAAGACGTGTTTTTGTTCAAAC
TGAAACTGGCAGTGTGTTGGGCATAGAGTTAGACAGGAGTGACAATGCATATACAGTGAA
GAAGAGATTGCAGCTTGCCCTCAATATCCCAACTGAAGAAAGCTCATTGACATATGGGGA
TACAGTATTAAAGAATGATCTAAGTGCTGTTAGACATGATTCTCCACTTCTTCTTACAAG
GAAATTCTTGCACAGAAGCTCATCTACGCCATGTCTCTCACCCACTGGTCGGGATCTTCA
GCAGAGAGATCAGAGTGGTCCAATTGAGATATTGGGGTGCTCAAATTACTTTGCTCCAAC
AAAGTTATTGGTGAAGGACATTGTGAAGGCAATAGAGAATGGTATTGATCCAATTCCTGT
TTGTAGTGGGCTTGGAGGTTCATACTATTTTAGAAATTGTAATGGTGAGAATGTTGCCAT
TGTGAAGCCAACAGATGAGGAGCCTTTTGCCCCAAACAACCCAAAGGGTTGGGTGGGGAA
AACCCTTGGGCAACCAGGCCTGAAACGTTCAGTGAGGGTTGGGGAGACAGGTTTTAGAGA
AGTGGCAGCTTACCTTCTTGACTATGATCATTTTTCCAATGTGCCATCTACTGCCCTTGT
AAAGATTACACACTCAATTTTCAATGTCAATGATAGAGTCAGCAAGATTGCCTCATTGCA
GCAGTTCATCCAGCATGATTTTGATGCTAGTGATCATGGTACTTCTAGCTTCACTGTTTC
TGCTGTACATAGGATTGGGATTTTAGATATTCGGATTTTAAACACAGACAGGCATGCAGG
AAACCTTTTAGTCAGGAAGCTTGACGGGTTTGAGAAGTTTGGTCAGGTGGAGCTTGTTCC
TATTGACCATGGGCTTTGTCTTCCAGAAAGCTTAGAGGATCCATACTTTGAGTGGATCCA
TTGGCCACAGGCATCTATTCCTTTCTCTGAGGATGAGCTAGAATATATTGATAATCTTGA
CCCTATTCATGATTCTGATATGCTGCGAATGGAGTTGCCCATGATTCGAGAGGCATGCCT
CCGAGTTTTGGTTCTTTGCACCACTTTCCTTAAGGAAGCAGCAGCATTTGGTCTATGTCT
TGCTGAGATTGGTGAAATGATGAGTAGGGAGTTTCAGGCCCATAAGGGGGATCCAAGTGA
GCTTGAGGTTATATGCATTGAGGCACGAAGGCAGTTAGAGGAGATGGAGGTGTTGGCTTT
GGAAAGGAAAGTAAGAGAAGAGGAGTTTCAGTTTGATATGGATTGTGAAGATGAGGAATT
TGATTTGATCCCTAGTAAGGAAGAGAAATTGGTGACTAAAACTACCTCTCATTTTGGGTT
CACAAGTGCTAATGGGCGAAATCCACTTTCTAAGTTGGAGGAGAATGTTGAGGAGGAGGC
AGCAGCAGAGATTGAGGGGAATGGCATGCTCTCCCAAGTGGAGGGGAGCCAGGTTCCAAG
TGCTTTGAAGTTGTCCTTGTCACTGGAAAACACAAAGGTTGGTAAGAAGACTTGGCAACA
CCAGGGTGCAATGTTAAAAGATGGTTGCTTGGCTGGTCCATCTTCTGGAAACTGGAGTGT
CAATGAGCAGTTGCCTGCAAGCACAAGTTTTGAGCTGACAGATATCAATGGAGAGGATTG
GACACAGTTCCTTGAAATTTTCCAGAAGTTGCTGCGCCCAGCTTTTGCTACTCGTAAATC
TACAAGTTTAGGTCAGAGGCAAAGGCAGAGGCTTGGAACTTCATGCCAGTTTTGAGAAGA
TAGCTATCAGATATAGAATGTGAAGTCCAAAGAAGAATAATGGGGTTGTATACCATGGGG
ATTTTAGGTGTCCTAGGTTCATGGGTTCCCATGATGGGCAACAGCTGGGAGTTGGAGCCT
CTTTTTTACGTAGTCATATTGTGAAATAGTAAGCTAAGAAGGTGAGAACTGTGGCTTTTT
TTCTTTTCTTTTCTTTATTTCTTTTTATTTTTCTTCCACTCCTTGTTCAATGTTTAGACA
ATAGAAGCAAATGGAAAAGGAGATCTTGGCGTATATAATGTTAGGTGAAAAAGCTGCAGA
GACACCGAGGTGCTGTTTGGAGGAAAAGAAAGAAACATTACAGCAGCTTGAGCAGCTTGA
GATAGGGAAGAATGAAAGTGAGAGAGACTTGCAAATACAGAAAACAGAGGCAGATGTCTC
CTCCATCAACTCTGCAAGTATTCATTTTCACCCCTGGTTGGAGGCCCCATCACCCAGACT
TCCTGCTGAGACTTCCAGCATTTATGGCAAATCATTATTATTATTTTCTTAGAGGCATTT
GAGAACAATTTCTGTGATTAAGAGGGAAATCACCTTAAGTAGAATGCTTTTGGTTTTTGA
TTTCTATTTGAAGAAACCTGTGATGGAGGTCCTATAAACTTGCAATCATTGAGTTGT