Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_14s0068g00220.t01
CDS Infomation

cds chromosome:12X:14:23939286:23945038:-1 gene:VIT_14s0068g00220 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit M [Source:UniProtKB/TrEMBL;Acc:D7SVA4]
Sequence

ATGACGACCCTTGTGCCTACTTCCGAGGAAGATCCGGCGCTTTCCGTCGTCCGCTACACC
GCCGAGATTTCCTGGGCCGACGCTGGTCCTGAGGTTGCTGAGCCACAGGTGACTAGATTA
TGTATGGAAGCTCAAGAATGCATGGTGAGGGGCAGATGGTTGGATTTGGCATCATTAATG
CTCACATCTGCTGACTTGATGTTTTCCAAAGCATCAGATAAAGATCTTGAGTGCATCTTC
ACTGTCATCTGTAATCTTGTCACGAAGTCTGAAAGTCCAGATGAAGCATTGGAGATGGCA
AAGTTTATATCTGCAAAAATTACTCAACAACCAAATGACAAGGCTGCATTGCGTTTGAAG
ATATTGTTTAATCTTTACAATCTATTAGAGAATCCATACAGCCGATTCTATGTTTATATG
AAGGCTCTTAATTTGGCAGTCAATGGAAAAGTCACCGAACATATTATCCCTTCTTTCAAA
ATGATGGATAGCTTCTTGAAAGAGTGGAATATCGGGATCTTGGATCAGAGAGCTCTCTAT
CTCAACATCTCTAATATTTTAAAAGAAAATAAAAGTTTGGGAAAGGATTATTTCAAATTC
CTGACCAAGTACTTAGCTACCTTTTCTGGAGAAGATGCATATACCATGAGTGAAGCCAAG
GAAGAAGCTGTCCGCACTATTATGGAATTTGTGAGGGCACCAGACATGTTTCAGTGTGAT
CTGCTGGATATGCCTGCAGTAGGACAATTGGAGAAAGACGCTAAATATGCATTGGTCTAT
CAGCTTCTGAAGATTTTTCTCACTCAGAGGCTTGATGCCTATTTAGATTTTCATGCTGCA
AACTCAACTCTACTTAAAAGCTATGGTCTTGTCCATGAAGACTGTATAACTAAGATGAGG
TTAATGTCTCTGGTGGATCTTGGCTCTGATGAATCTTGTCAAATTCCATATTCTCTCATC
AAAGACACACTTAGGATTGATGATGATGAGGTGGAACTCTGGGTGGTTAAGGCAATAACT
GTGAAATTAATGGATTGTAAGATGGACCAAATGAATCAAGTTGTGCTTGTGAGCCGCTGT
AGTGAGCGTGTATTTGGGCAGCAGCAGTGGCAAAACCTTCGATCAAAGCTACTGACATGG
AGGGGTAATATTGCAAATGTCATCAATACCATTCAAGCCAACAAGATAAGTGAAGATGGC
TCTCAGGCAATGCAAGGCTTGACGATACGATAA

Peptide Sequence

PEP ID

VIT_14s0068g00220.t01
PEP Infomation

pep chromosome:12X:14:23939286:23945038:-1 gene:VIT_14s0068g00220 transcript:VIT_14s0068g00220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit M [Source:UniProtKB/TrEMBL;Acc:D7SVA4]
Sequence

MTTLVPTSEEDPALSVVRYTAEISWADAGPEVAEPQVTRLCMEAQECMVRGRWLDLASLM
LTSADLMFSKASDKDLECIFTVICNLVTKSESPDEALEMAKFISAKITQQPNDKAALRLK
ILFNLYNLLENPYSRFYVYMKALNLAVNGKVTEHIIPSFKMMDSFLKEWNIGILDQRALY
LNISNILKENKSLGKDYFKFLTKYLATFSGEDAYTMSEAKEEAVRTIMEFVRAPDMFQCD
LLDMPAVGQLEKDAKYALVYQLLKIFLTQRLDAYLDFHAANSTLLKSYGLVHEDCITKMR
LMSLVDLGSDESCQIPYSLIKDTLRIDDDEVELWVVKAITVKLMDCKMDQMNQVVLVSRC
SERVFGQQQWQNLRSKLLTWRGNIANVINTIQANKISEDGSQAMQGLTIR

Transcript Sequence

Transcript ID

VIT_14s0068g00220.t01
Transcript Infomation

cdna chromosome:12X:14:23939286:23945038:-1 gene:VIT_14s0068g00220 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit M [Source:UniProtKB/TrEMBL;Acc:D7SVA4]
Sequence

GAGGTAGGGTTTTTATCTCTCTCCCTCTCCTGCTGCTGAAATAACTAGGGTTTCCAATTT
GGCGTTGCAGAGAGAGGGAGCTTCGACAATGACGACCCTTGTGCCTACTTCCGAGGAAGA
TCCGGCGCTTTCCGTCGTCCGCTACACCGCCGAGATTTCCTGGGCCGACGCTGGTCCTGA
GGTTGCTGAGCCACAGGTGACTAGATTATGTATGGAAGCTCAAGAATGCATGGTGAGGGG
CAGATGGTTGGATTTGGCATCATTAATGCTCACATCTGCTGACTTGATGTTTTCCAAAGC
ATCAGATAAAGATCTTGAGTGCATCTTCACTGTCATCTGTAATCTTGTCACGAAGTCTGA
AAGTCCAGATGAAGCATTGGAGATGGCAAAGTTTATATCTGCAAAAATTACTCAACAACC
AAATGACAAGGCTGCATTGCGTTTGAAGATATTGTTTAATCTTTACAATCTATTAGAGAA
TCCATACAGCCGATTCTATGTTTATATGAAGGCTCTTAATTTGGCAGTCAATGGAAAAGT
CACCGAACATATTATCCCTTCTTTCAAAATGATGGATAGCTTCTTGAAAGAGTGGAATAT
CGGGATCTTGGATCAGAGAGCTCTCTATCTCAACATCTCTAATATTTTAAAAGAAAATAA
AAGTTTGGGAAAGGATTATTTCAAATTCCTGACCAAGTACTTAGCTACCTTTTCTGGAGA
AGATGCATATACCATGAGTGAAGCCAAGGAAGAAGCTGTCCGCACTATTATGGAATTTGT
GAGGGCACCAGACATGTTTCAGTGTGATCTGCTGGATATGCCTGCAGTAGGACAATTGGA
GAAAGACGCTAAATATGCATTGGTCTATCAGCTTCTGAAGATTTTTCTCACTCAGAGGCT
TGATGCCTATTTAGATTTTCATGCTGCAAACTCAACTCTACTTAAAAGCTATGGTCTTGT
CCATGAAGACTGTATAACTAAGATGAGGTTAATGTCTCTGGTGGATCTTGGCTCTGATGA
ATCTTGTCAAATTCCATATTCTCTCATCAAAGACACACTTAGGATTGATGATGATGAGGT
GGAACTCTGGGTGGTTAAGGCAATAACTGTGAAATTAATGGATTGTAAGATGGACCAAAT
GAATCAAGTTGTGCTTGTGAGCCGCTGTAGTGAGCGTGTATTTGGGCAGCAGCAGTGGCA
AAACCTTCGATCAAAGCTACTGACATGGAGGGGTAATATTGCAAATGTCATCAATACCAT
TCAAGCCAACAAGATAAGTGAAGATGGCTCTCAGGCAATGCAAGGCTTGACGATACGATA
AGTTAATCACTGCTTTTTGTCGGCCAGCATTATCTAGAGATAGGTTAGACTGAGATTGGG
GCTGAACTGAAGTGCAATTGAGTTTCATTTGATTTTCCTTTTGACAGAGTTTAAGTTATT
TTTTGTTTTGTTTTTTCATTCTACCAAAGCTAAATGACTACATGGATTAGCATGTATCAT
TCACAAACATGTATTGTATTTAAAAGTTTTGTTGGATTGCT