Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_14s0060g00110.t01
CDS Infomation

cds chromosome:12X:14:122659:128242:1 gene:VIT_14s0060g00110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGTCAAGCTCTCATTTCCGGCGGATCATCCGCCATTGTACGTCATCGCGACAGCC
AAGGTCGCCGGAATACCCATTTCAGAGGATTCATCTCTTGCTTCTGGTTCTCTTCCCACT
TTTCTCATTTCCAGCAATGATAATGAATTCAAATTGAGGGGAACATCAATAAATGCTCTT
CTCCGTTATCTTGGGCGGGTTGCAAGCATTCCCAATTTTTATGGGCAGGATGCATTTGAA
TCTTGCCAGATTGATGAATGGCTAGAATATGCTCCAACCTTTTCAACTGGTTCTGAATTT
GAGAATGCATGCTGCTATGTGGATGGCATTTTGTTGCAGCGTACCTTTTTGGTTGGTTAT
AGTTTGTCAATTGCAGATATAGCAATTTGGTCAGGTCTTGCAGGAAGTGGACAGAGATGG
GAAAGTTTGAGGAAATCAAAGAAATACCAGAATTTAGTGCGGTGGTTCAATTCAATATAT
GCAGAATACAACACTGTCTTGAATGAAGTTACTGGAACATATGTTGGCAAAAGAGGCTTG
GGAAAGCCAATGCCGGCCAAAATGAAAGAAAAAGAGCAACAGGGTATTAATAATCATATG
AAGAATGTAAGTGGGGATGCCAATGAAAAGGGAAAAGCTAGCAGCAAGGCCACTGCTGAA
GTGGATCTTCCGGATGCAGAAGTCGGAAATGTGCGGTTGCGTTTTGCACCAGAACCCAGT
GGTTATCTTCACATTGGGCACTCAAAAGCTGCATTAATGAACCAGTATTTTGCTCAAAGG
TATCAAGGTCAGCTGATTGTGCGCTTTGATGATACAAATCCTGCTAAAGAAAGCAATGAA
TTTGTGGAAAATCTTTTGAAAGATATCGAGACTTTGGGTATTAAGTATGATGCTGTGACA
TATACTTCAGATTACTTCCCTCAGTTAATGGAAATGGCTGAAAATTTGATTTGTAATGGT
AAAGCGTATGTTGATGATACACCACGTGAGCAAATGCAGAAAGAACGGATGGATGGAATT
GAATCAAAATGCAGGAATAACAGCCCTCAGAAGAATATGGAATTGTGGAAGGAAATGATT
GCAGGATCTGAAAGGGGTTTGATGTGCTGTCTGCGTGGGAAGTTGGATATGCAGGACCCA
AATAAATCGCTTCGAGATCCAGTTTATTACCGTTGCAATCCGCTTCCCCACCATAGGATT
GGTTCCAAGTACAAGTTATACCCAACCTATGATTTTGCTTGTCCATTTGTTGATGCTAAA
GAAGGTATAACTCATGCACTTCGATCTAGTGAGTACCATGATCGCAATGCTCAGTATCAT
AGGATCCAAGAGGATATGGGAGTAAAGAAGGTTCACATCTATGAATTTAGCCGGTTGAAT
ATGGTGTATACGCTTCTCAGCAAACGTAAGCTTCTCTGGTTTGTTCAAAATGGAAAAGTT
GATGGGTGGGATGATCCTCGTTTCCCGACTGTCCAAGGGATTGTGCGTAGAGGTCTGAAA
ATTGACGCATTGATACAATTCATCCTTGAACAGGGGGCATCGAAAAATCTCAATCTCATG
GAATGGGATAAACTCTGGACCATTAATAAGAAGATTATTGATCCTGTCTGTCCCAGACAT
ACTGCTGTTATTGATGAAAAACGTGTGTTAGTAACCTTAGCTGATGGTCCTGAGAAACCA
TTTGTCCGCATCATACCAAGGCATAAGAAATTTGAAGGCGCTGGAGAAAAGTGTACCACA
TACACAAAGAGGATATGGATTGACTATGCTGATGCAGTGTCCATCTCAGAAAATGAGGAA
ATAACCTTAATGGATTGGGGGAATGCCATCATAAAAGAAATCAGGAAGGATCAGGATGGG
AATATTACGCAGTTAATAGGGGTTTTGCATCTCGAAGGATCTGTCAAGGCCACAAAATTG
AAGCTTACCTGGCTACCTGAAACAAGCGAATTGGTTAACCTTTCATTGATGGAGTTTGAC
TATCTAATCACAAAGAAGAAGCTGGATGAAGGAGATGATTTCCTTGATGCGCTTAACCCG
TGTACCAAAAGAGAGACTGCAGCAGTTGGGGATTCTAACATACGGAATTTAAAGCGCGGT
GAGATAGTGCAGCTGGAGAGGAAGGGCTATTATAGGTGCGATGCTCCCTTCATTAGACCT
TCAAAACCAGTAGTTCTATTTGCAATCCCAGATGGCAGGCAGCAAAAATAA

Peptide Sequence

PEP ID

VIT_14s0060g00110.t01
PEP Infomation

pep chromosome:12X:14:122659:128242:1 gene:VIT_14s0060g00110 transcript:VIT_14s0060g00110.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEVKLSFPADHPPLYVIATAKVAGIPISEDSSLASGSLPTFLISSNDNEFKLRGTSINAL
LRYLGRVASIPNFYGQDAFESCQIDEWLEYAPTFSTGSEFENACCYVDGILLQRTFLVGY
SLSIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSIYAEYNTVLNEVTGTYVGKRGL
GKPMPAKMKEKEQQGINNHMKNVSGDANEKGKASSKATAEVDLPDAEVGNVRLRFAPEPS
GYLHIGHSKAALMNQYFAQRYQGQLIVRFDDTNPAKESNEFVENLLKDIETLGIKYDAVT
YTSDYFPQLMEMAENLICNGKAYVDDTPREQMQKERMDGIESKCRNNSPQKNMELWKEMI
AGSERGLMCCLRGKLDMQDPNKSLRDPVYYRCNPLPHHRIGSKYKLYPTYDFACPFVDAK
EGITHALRSSEYHDRNAQYHRIQEDMGVKKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKV
DGWDDPRFPTVQGIVRRGLKIDALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRH
TAVIDEKRVLVTLADGPEKPFVRIIPRHKKFEGAGEKCTTYTKRIWIDYADAVSISENEE
ITLMDWGNAIIKEIRKDQDGNITQLIGVLHLEGSVKATKLKLTWLPETSELVNLSLMEFD
YLITKKKLDEGDDFLDALNPCTKRETAAVGDSNIRNLKRGEIVQLERKGYYRCDAPFIRP
SKPVVLFAIPDGRQQK

Transcript Sequence

Transcript ID

VIT_14s0060g00110.t01
Transcript Infomation

cdna chromosome:12X:14:122659:128242:1 gene:VIT_14s0060g00110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCAACTGTTGTTCAGTCAATAGAGGCGGCTTAGGATGGAGGTCAAGCTCTCATTTCCGG
CGGATCATCCGCCATTGTACGTCATCGCGACAGCCAAGGTCGCCGGAATACCCATTTCAG
AGGATTCATCTCTTGCTTCTGGTTCTCTTCCCACTTTTCTCATTTCCAGCAATGATAATG
AATTCAAATTGAGGGGAACATCAATAAATGCTCTTCTCCGTTATCTTGGGCGGGTTGCAA
GCATTCCCAATTTTTATGGGCAGGATGCATTTGAATCTTGCCAGATTGATGAATGGCTAG
AATATGCTCCAACCTTTTCAACTGGTTCTGAATTTGAGAATGCATGCTGCTATGTGGATG
GCATTTTGTTGCAGCGTACCTTTTTGGTTGGTTATAGTTTGTCAATTGCAGATATAGCAA
TTTGGTCAGGTCTTGCAGGAAGTGGACAGAGATGGGAAAGTTTGAGGAAATCAAAGAAAT
ACCAGAATTTAGTGCGGTGGTTCAATTCAATATATGCAGAATACAACACTGTCTTGAATG
AAGTTACTGGAACATATGTTGGCAAAAGAGGCTTGGGAAAGCCAATGCCGGCCAAAATGA
AAGAAAAAGAGCAACAGGGTATTAATAATCATATGAAGAATGTAAGTGGGGATGCCAATG
AAAAGGGAAAAGCTAGCAGCAAGGCCACTGCTGAAGTGGATCTTCCGGATGCAGAAGTCG
GAAATGTGCGGTTGCGTTTTGCACCAGAACCCAGTGGTTATCTTCACATTGGGCACTCAA
AAGCTGCATTAATGAACCAGTATTTTGCTCAAAGGTATCAAGGTCAGCTGATTGTGCGCT
TTGATGATACAAATCCTGCTAAAGAAAGCAATGAATTTGTGGAAAATCTTTTGAAAGATA
TCGAGACTTTGGGTATTAAGTATGATGCTGTGACATATACTTCAGATTACTTCCCTCAGT
TAATGGAAATGGCTGAAAATTTGATTTGTAATGGTAAAGCGTATGTTGATGATACACCAC
GTGAGCAAATGCAGAAAGAACGGATGGATGGAATTGAATCAAAATGCAGGAATAACAGCC
CTCAGAAGAATATGGAATTGTGGAAGGAAATGATTGCAGGATCTGAAAGGGGTTTGATGT
GCTGTCTGCGTGGGAAGTTGGATATGCAGGACCCAAATAAATCGCTTCGAGATCCAGTTT
ATTACCGTTGCAATCCGCTTCCCCACCATAGGATTGGTTCCAAGTACAAGTTATACCCAA
CCTATGATTTTGCTTGTCCATTTGTTGATGCTAAAGAAGGTATAACTCATGCACTTCGAT
CTAGTGAGTACCATGATCGCAATGCTCAGTATCATAGGATCCAAGAGGATATGGGAGTAA
AGAAGGTTCACATCTATGAATTTAGCCGGTTGAATATGGTGTATACGCTTCTCAGCAAAC
GTAAGCTTCTCTGGTTTGTTCAAAATGGAAAAGTTGATGGGTGGGATGATCCTCGTTTCC
CGACTGTCCAAGGGATTGTGCGTAGAGGTCTGAAAATTGACGCATTGATACAATTCATCC
TTGAACAGGGGGCATCGAAAAATCTCAATCTCATGGAATGGGATAAACTCTGGACCATTA
ATAAGAAGATTATTGATCCTGTCTGTCCCAGACATACTGCTGTTATTGATGAAAAACGTG
TGTTAGTAACCTTAGCTGATGGTCCTGAGAAACCATTTGTCCGCATCATACCAAGGCATA
AGAAATTTGAAGGCGCTGGAGAAAAGTGTACCACATACACAAAGAGGATATGGATTGACT
ATGCTGATGCAGTGTCCATCTCAGAAAATGAGGAAATAACCTTAATGGATTGGGGGAATG
CCATCATAAAAGAAATCAGGAAGGATCAGGATGGGAATATTACGCAGTTAATAGGGGTTT
TGCATCTCGAAGGATCTGTCAAGGCCACAAAATTGAAGCTTACCTGGCTACCTGAAACAA
GCGAATTGGTTAACCTTTCATTGATGGAGTTTGACTATCTAATCACAAAGAAGAAGCTGG
ATGAAGGAGATGATTTCCTTGATGCGCTTAACCCGTGTACCAAAAGAGAGACTGCAGCAG
TTGGGGATTCTAACATACGGAATTTAAAGCGCGGTGAGATAGTGCAGCTGGAGAGGAAGG
GCTATTATAGGTGCGATGCTCCCTTCATTAGACCTTCAAAACCAGTAGTTCTATTTGCAA
TCCCAGATGGCAGGCAGCAAAAATAAGAACTTTACACCAAAGGAGTTTTCCACCCATATC
CCAAGAATTTTGGAACTTACATTAGAGACTACGTTGATTCAGTGATTGTATGAAATGAGA
AAAGGAAGGTTCCTACGCTTACTTTTGTTTTAGATATGGGAACTGATGGAGATTGTTGCT
TTGATGGTTTTATTGATTCGTCTTTCTGAGGATGAACAACCTTATAAATTACTGTGGCAA
TTCTAATATTATGGAGTTTTATTTT