Plant GARDEN
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_14s0060g00100.t01
CDS Infomation

cds chromosome:12X:14:115059:121638:1 gene:VIT_14s0060g00100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phytochrome [Source:UniProtKB/TrEMBL;Acc:A5B9C2]
Sequence

ATGTCTTCTTCTAGACCTACTCAGTCATCCAGCACTTCAGGTCGATCAAAACACAGTGCT
AGGATTATTGCTCAGACCACCGTGGATGCAAAGCTACATGCGGATTTTGAGGAGTCAGGT
AGTTCATTTGACTACTCAAGTTCAGTGCGTTTTACTCCAGCTGGTGGAGATCAACAGCCC
AGATCTGACAAAGTAACAACAGCTTACCTCCATCACATACAGAAAGGCAAACTGATCCAA
CCATTTGGCTCTTTGTTAGCCCTAGATGAGAAAACTTTCAAAGTCATTGCCTACAGTGAA
AATGCCCCTGAAATGTTGACAATGGTTAGTCATGCAGTCCCAAGCGTTGGTGAGCATCCA
GTTCTGGGCATTGGTACTGATGTGAGGACCATCTTCAGTGGCCCCAGTGCATCTGCACTG
CACAAGGCCTTAGGATTTGGAGAGGTTTCTCTTCTGAATCCCATCTTAGTCCATTGCAAA
ACCTCAGGGAAGCCCTTTTATGCAATCATCCATAGGGTCACTGGTAGCTTGATCATTGAC
TTTGAACCGGTGAAGCCTTACGAAGTTCCCATGACTGCTGCTGGTGCCCTGCAATCCTAT
AAGCTTGCAGCCAAAGCAATCACGAGGTTGCAGTCGCTGCCTAGTGGTAGCTTGGAAAGG
CTTTGTGATACAATGGTTCAAGAGGTTTTTGAACTCACTGGTTATGACAGGGTGATGGCT
TATAAATTTCATGATGACGACCATGGGGAGGTTGTCTCTGAGATAACAAAGCCAGGCCTT
GAGCCATATCTGGGTTTACATTATCCTGCCACAGATATCCCTCAGGCTGCACGTTTCTTA
TTCATGAAGAATAAGGTCCGAATGATCTGTGATTGTCGTGCAAAACACATACAGGTTCTT
CAAGATGAGAAACTCCCATTTGATTTAACATTATGTGGTTCAACACTACGGGCTCCACAC
AGTTGCCATGTACAGTATATGGAGAACATGAATTCAATTGCTTCTCTTGTTATGGCAGTT
GTTGTCAATGACGGGGATGAAGAGGGTGAAAGCTCTAATTCTGGGCAGCCACAGAAGAGA
AAGAGGCTTTGGGGTTTAGTGGTTTGCCATCATACAACTCCAAGGTTTGTTCCCTTCCCT
CTTCGCTATGCCTGCGAGTTTCTAGCTCAAGTGTTTGCCATCCATGTCAATAAGGAGTTA
GAATTAGAAAGTCAGATTCTTGAGAAGAATATTCTGCGTACACAGACACTCTTGTGTGAT
ATGCTGATGCGAGATGCGCCCTTAGGCATAGTGTCACAGAGCCCAAATGTAATGGATCTT
GTGAAATGTGATGGAGCTGCTCTACTATACAAAAATAAAGTATGGAGATTGGGAATAACT
CCAAGTGACTTCCAGTTGCATGATATCTGTTCATGGCTATCCGAGTACCACATGGATTCA
ACTGGTTTAAGCACAGATAGCTTGTATGATGCAGGATACCCAGGGGCTCTTGCCCTTGGT
GATGCAGTTTGTGGGATGGCAGCTGTGAAGATAACTTCAAAGGATACTCTTTTCTGGTTC
CGGTCCCACACAGCTGCAGAAGTCCGATGGGGTGGGGCAAAGCATGAACCGGGTGAGAAG
GATGATGGTAGGAAGATGCACCCAAGATCATCATTTAAAGCTTTCCTTGAAGTCGTTAAG
ACGAGGAGTTTACCTTGGAAGGACTATGAAATGGATGCAATCCATTCTTTGCAGCTTATC
CTTAGGAATGCTTTCAAAGATTCTGAGGCCATGGATGTAAACACCAATGCGATCCACACA
AAGCTCAATGACCTAAAAATTGAAGGAATGCAAGAGCTAGAAGCAGTGACCAGTGAGATG
GTCCGTTTGATTGAAACAGCCAGTGTGCCAATCTTGGCAGTTGATGTTGATGGTCTGGTT
AATGGATGGAATACAAAAATTTCTGAGTTGACTAGTCTGCCTGTAGATAAAGCAATTGGG
ATGCATTTGCTCACGCTTGTGGAAGATTCTTCAGCTGATACTGTAAAAAAGATGTTGCAT
TTGGCGTTGCAGGGCCAAGAGGAGCAAAATGTCCAATTTGAGATCAAAACGCATGGGTCT
AAAAGAGACTCTGGCCCCATCAGCTTAGTTGTAAATGCTTGTGCAAGCAGGGATCTCCAT
GAAAATGTTGTGGGGGTATGTTTTGTGGCCCAAGATATAACCAGTCAGAAGACGGTGATG
GATAAGTTCACCCGAATTGAAGGTGATTACAAAGCAATAGTACAGAACCCAAACCCATTG
ATTCCCCCAATATTTGGCACAGATGAATTTGGCTGGTGCTCTGAGTGGAATCCGGCAATG
GTAAAGTTATCTGGGTGGAATCGGGAAGAAGTTATGGATAAAATGCTTTTAGGGGAAGTG
TTTGGGACCCATATGGCATGCTGTCGTCTCAAGAATCGAGAGGCTTTTGTTGGTTTGGGA
ATTGTGCTCAATAGTGTTATGACTGGTCGGGAATCAGAAAAGGTTTCCTTTGGTTTCTTT
TCAAAGAGTGGGAAGTATGTAGAATGCCTGCTTTCTGTGAGCAAGAAATTGGACAGAGAG
GGTGCAGTCACTGGGGTATTTTGCTTCTTGCAGTTAGCTAGCCAAGAGCTGCAACAAGCA
CTTCATATCCAGCGGTTGTCGGAGCAAACTGCCTTGAAGAGATTGAAAGCATTAGCTTAT
ATAAAAAGGCAGATCAAGAATCCTCTTTCTGGGATTATCTTTTCTCGGAAGATGATGGAG
GATACTGATTTGGGAGAGGAACAGCAACAGATTCTTCATACTAGTGCCCAGTGCCAGCGT
CAACTCAGCAAGATTCTTGATGACCATGATCTTGATAGTATTATTGAAGGTTACTTGGAT
CTGGAAATGGTCGAGTTTACTCTGCGTGAAGTATTGGTTGCCTCCATCAGCCAGGTCATG
ATAAAGAGTAATGGAAAGGGTATTCAAATAGTTAATGATGCGGAAGAGGGGATCATGACT
GAAACACTCTATGGAGATGGTCTTAGGCTTCAACAGGTGCTAGCTGATTTCTTGTTGATA
TCAGTAAATTTTACACCAGGTGGAGGCCAGCTTTCTGTTGCAGCTAGTTTGATCAAAGAT
CGGTTGGGGGAATCTGTCCATCTTGTGCATCTGGAACTCAGGATAACACATGCAGGAAAT
GGGGTACCAGAACAATTGCTGAACCAGATGTTTGGAAACAATGGAGACGCGTCTGAGGAG
GGCATAAGTCTGCTTATCAGCAGGAAACTGGTGAAGCTGATGAATGGGGATGTCCAGTAT
CTAAGGGAAGCGGGAAAATCGACTTTCATCATATCAATCGAACTAGCTGCTGCTAGAAAG
AAGCCACAGGCCTAA

Peptide Sequence

PEP ID

VIT_14s0060g00100.t01
PEP Infomation

pep chromosome:12X:14:115059:121638:1 gene:VIT_14s0060g00100 transcript:VIT_14s0060g00100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phytochrome [Source:UniProtKB/TrEMBL;Acc:A5B9C2]
Sequence

MSSSRPTQSSSTSGRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQP
RSDKVTTAYLHHIQKGKLIQPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHP
VLGIGTDVRTIFSGPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMA
YKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVL
QDEKLPFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKR
KRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCD
MLMRDAPLGIVSQSPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDS
TGLSTDSLYDAGYPGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEK
DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHT
KLNDLKIEGMQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIG
MHLLTLVEDSSADTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLH
ENVVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAM
VKLSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFF
SKSGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAY
IKRQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLD
LEMVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLI
SVNFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEE
GISLLISRKLVKLMNGDVQYLREAGKSTFIISIELAAARKKPQA

Transcript Sequence

Transcript ID

VIT_14s0060g00100.t01
Transcript Infomation

cdna chromosome:12X:14:115059:121638:1 gene:VIT_14s0060g00100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phytochrome [Source:UniProtKB/TrEMBL;Acc:A5B9C2]
Sequence

TCAACTACCTCTATTATCCATCTTTGGAAACCAAAACCAAACCCAAACCCAAACGGCCAA
ACCCATGGGTTTTCTAGTGTTCGGCATGTTATTCCAGTCAAATCTCTCCCCCTTCTCAAT
GCATTGGAGAATGTTCAATTAATATATTATAATAGAGATGCACGCCAGAGCAAACCTAAG
GTAATTTCTCTATTTCTCTGAGCAATTGGGTATGGCCCGTGCTCCCCTTTAAGGGTTCAG
ATGAGACGGTGATCGAGGCTCCCGGGTGATGGATTTTAAGCTATTTCTATTCTCAAGTTG
GGGTTTGCTCAGCTGAGTTGGGACTTCTACTTTCAAGCTCTTCAGCTCTGGGACTAGTGT
CTTTTGCATTCTGCAATTCTAAAGAGGTTGGAGGAAAAATGTCTTCTTCTAGACCTACTC
AGTCATCCAGCACTTCAGGTCGATCAAAACACAGTGCTAGGATTATTGCTCAGACCACCG
TGGATGCAAAGCTACATGCGGATTTTGAGGAGTCAGGTAGTTCATTTGACTACTCAAGTT
CAGTGCGTTTTACTCCAGCTGGTGGAGATCAACAGCCCAGATCTGACAAAGTAACAACAG
CTTACCTCCATCACATACAGAAAGGCAAACTGATCCAACCATTTGGCTCTTTGTTAGCCC
TAGATGAGAAAACTTTCAAAGTCATTGCCTACAGTGAAAATGCCCCTGAAATGTTGACAA
TGGTTAGTCATGCAGTCCCAAGCGTTGGTGAGCATCCAGTTCTGGGCATTGGTACTGATG
TGAGGACCATCTTCAGTGGCCCCAGTGCATCTGCACTGCACAAGGCCTTAGGATTTGGAG
AGGTTTCTCTTCTGAATCCCATCTTAGTCCATTGCAAAACCTCAGGGAAGCCCTTTTATG
CAATCATCCATAGGGTCACTGGTAGCTTGATCATTGACTTTGAACCGGTGAAGCCTTACG
AAGTTCCCATGACTGCTGCTGGTGCCCTGCAATCCTATAAGCTTGCAGCCAAAGCAATCA
CGAGGTTGCAGTCGCTGCCTAGTGGTAGCTTGGAAAGGCTTTGTGATACAATGGTTCAAG
AGGTTTTTGAACTCACTGGTTATGACAGGGTGATGGCTTATAAATTTCATGATGACGACC
ATGGGGAGGTTGTCTCTGAGATAACAAAGCCAGGCCTTGAGCCATATCTGGGTTTACATT
ATCCTGCCACAGATATCCCTCAGGCTGCACGTTTCTTATTCATGAAGAATAAGGTCCGAA
TGATCTGTGATTGTCGTGCAAAACACATACAGGTTCTTCAAGATGAGAAACTCCCATTTG
ATTTAACATTATGTGGTTCAACACTACGGGCTCCACACAGTTGCCATGTACAGTATATGG
AGAACATGAATTCAATTGCTTCTCTTGTTATGGCAGTTGTTGTCAATGACGGGGATGAAG
AGGGTGAAAGCTCTAATTCTGGGCAGCCACAGAAGAGAAAGAGGCTTTGGGGTTTAGTGG
TTTGCCATCATACAACTCCAAGGTTTGTTCCCTTCCCTCTTCGCTATGCCTGCGAGTTTC
TAGCTCAAGTGTTTGCCATCCATGTCAATAAGGAGTTAGAATTAGAAAGTCAGATTCTTG
AGAAGAATATTCTGCGTACACAGACACTCTTGTGTGATATGCTGATGCGAGATGCGCCCT
TAGGCATAGTGTCACAGAGCCCAAATGTAATGGATCTTGTGAAATGTGATGGAGCTGCTC
TACTATACAAAAATAAAGTATGGAGATTGGGAATAACTCCAAGTGACTTCCAGTTGCATG
ATATCTGTTCATGGCTATCCGAGTACCACATGGATTCAACTGGTTTAAGCACAGATAGCT
TGTATGATGCAGGATACCCAGGGGCTCTTGCCCTTGGTGATGCAGTTTGTGGGATGGCAG
CTGTGAAGATAACTTCAAAGGATACTCTTTTCTGGTTCCGGTCCCACACAGCTGCAGAAG
TCCGATGGGGTGGGGCAAAGCATGAACCGGGTGAGAAGGATGATGGTAGGAAGATGCACC
CAAGATCATCATTTAAAGCTTTCCTTGAAGTCGTTAAGACGAGGAGTTTACCTTGGAAGG
ACTATGAAATGGATGCAATCCATTCTTTGCAGCTTATCCTTAGGAATGCTTTCAAAGATT
CTGAGGCCATGGATGTAAACACCAATGCGATCCACACAAAGCTCAATGACCTAAAAATTG
AAGGAATGCAAGAGCTAGAAGCAGTGACCAGTGAGATGGTCCGTTTGATTGAAACAGCCA
GTGTGCCAATCTTGGCAGTTGATGTTGATGGTCTGGTTAATGGATGGAATACAAAAATTT
CTGAGTTGACTAGTCTGCCTGTAGATAAAGCAATTGGGATGCATTTGCTCACGCTTGTGG
AAGATTCTTCAGCTGATACTGTAAAAAAGATGTTGCATTTGGCGTTGCAGGGCCAAGAGG
AGCAAAATGTCCAATTTGAGATCAAAACGCATGGGTCTAAAAGAGACTCTGGCCCCATCA
GCTTAGTTGTAAATGCTTGTGCAAGCAGGGATCTCCATGAAAATGTTGTGGGGGTATGTT
TTGTGGCCCAAGATATAACCAGTCAGAAGACGGTGATGGATAAGTTCACCCGAATTGAAG
GTGATTACAAAGCAATAGTACAGAACCCAAACCCATTGATTCCCCCAATATTTGGCACAG
ATGAATTTGGCTGGTGCTCTGAGTGGAATCCGGCAATGGTAAAGTTATCTGGGTGGAATC
GGGAAGAAGTTATGGATAAAATGCTTTTAGGGGAAGTGTTTGGGACCCATATGGCATGCT
GTCGTCTCAAGAATCGAGAGGCTTTTGTTGGTTTGGGAATTGTGCTCAATAGTGTTATGA
CTGGTCGGGAATCAGAAAAGGTTTCCTTTGGTTTCTTTTCAAAGAGTGGGAAGTATGTAG
AATGCCTGCTTTCTGTGAGCAAGAAATTGGACAGAGAGGGTGCAGTCACTGGGGTATTTT
GCTTCTTGCAGTTAGCTAGCCAAGAGCTGCAACAAGCACTTCATATCCAGCGGTTGTCGG
AGCAAACTGCCTTGAAGAGATTGAAAGCATTAGCTTATATAAAAAGGCAGATCAAGAATC
CTCTTTCTGGGATTATCTTTTCTCGGAAGATGATGGAGGATACTGATTTGGGAGAGGAAC
AGCAACAGATTCTTCATACTAGTGCCCAGTGCCAGCGTCAACTCAGCAAGATTCTTGATG
ACCATGATCTTGATAGTATTATTGAAGGTTACTTGGATCTGGAAATGGTCGAGTTTACTC
TGCGTGAAGTATTGGTTGCCTCCATCAGCCAGGTCATGATAAAGAGTAATGGAAAGGGTA
TTCAAATAGTTAATGATGCGGAAGAGGGGATCATGACTGAAACACTCTATGGAGATGGTC
TTAGGCTTCAACAGGTGCTAGCTGATTTCTTGTTGATATCAGTAAATTTTACACCAGGTG
GAGGCCAGCTTTCTGTTGCAGCTAGTTTGATCAAAGATCGGTTGGGGGAATCTGTCCATC
TTGTGCATCTGGAACTCAGGATAACACATGCAGGAAATGGGGTACCAGAACAATTGCTGA
ACCAGATGTTTGGAAACAATGGAGACGCGTCTGAGGAGGGCATAAGTCTGCTTATCAGCA
GGAAACTGGTGAAGCTGATGAATGGGGATGTCCAGTATCTAAGGGAAGCGGGAAAATCGA
CTTTCATCATATCAATCGAACTAGCTGCTGCTAGAAAGAAGCCACAGGCCTAAATAACTG
TGTGAGGAAGCAAGATCACAGTCTGGTTTGTACAGGCAAAAGAGAATGGAGTGTAATGTT
GTTGTACTATGCCACGCACTGTGGTAGGCTTTGTTTTTCTTTTTTAATCTTGGCTTTACT
CTGATTGTGTTGTTTCAGCTTTCAAGTTGTACATATTGATGTGCCATCGTTGATAAACAT