Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_14s0030g01340.t01
CDS Infomation

cds chromosome:12X:14:5857829:5919059:-1 gene:VIT_14s0030g01340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCATCAGTTTCAAGTTTCCGGGTGGCTCTGCCTAGTTTTGTGCTCAAGTCAGAGTGT
AAGTCTAGGAATCGAGCACAAATTCAGTGTTTAACGGGCCCTGATTCGTCCATGGTGTCT
TCTGATTCAGTTTTAGTAAATGGAGCTTCTGTTGTTGGAGATAAGTCCAAAATTGAGCCT
TTGATCAATGGTGAGAATAGGAGGTTAGGGTCTAAAGTTGAGGAGAAGAAGAGTGTGAAA
TATGATGTCAAGGAACAGTTAGAAGTGTTGTGGGATGATGGTTATGGGACTGAGACTGTA
AAAGATTACCTTGAGATATCCAAGGAGATGATTAGGCCAGATGGGGGGCCACCCCGGTGG
TTTTGCCCAGTGGCCTGTGGGCAGCCTTTGAAGGATTCCCCTGTTCTTTTGTTTTTGCCA
GGTATAGATGGTGTTGGATTGGGCCTCATTTTACACCATAAAGCTCTTGGCAAGGTTTTT
GAAGTTCGGTGCATGCATATTCCTGTTTATGATCGAACGCCATTTGAAGGTCTGGTGAAA
CTTGTGGAAAAAACTGTGAGGCTTGAGCATGCTTCATCTCCAAATAAACCCATTTATTTG
TTAGGAGAGTCATTTGGAGGATGCCTGGCACTTGCTGTTGCTGCTCGTAATCCTACCATT
GACCTGGTAGTGATATTAGTAAATCCAGCAACATCATTTGGGAGGTCACAGCTGCAACCT
TTGCTCCCTATATTGGAGTCTTTGCCTGATGGACTTCATTTCACAGTGCCTTATCTGCTC
AGCTTTATTATGGGAGATCCAATGAAGATGGCAATGGTCAATATTGATAGTACACTTCCT
CCTCCATTTGTAGTTGAACAATTATCTGGGAACCTCACTGCTTTGCTACCATGTCTTTCT
GGCTTGTCTGACATCATACCCAAAGACACTCTTCATTGGAAGCTGAAGCTGCTTAAATCA
GCTGCTGCTTATGCTAATTCCCGCCTCCATGCTGTTAAAGCTGAAGTACTTTTGCTTGCT
AGTGGCAAGGACAACATGCTTCCTAGTGGAGATGAAGCTCGACGACTTTGGAATTTACTA
CAGAATTGTAGAGTTCGTTACTTCAAGGACAATGGGCATACCCTCTTACTGGAGGATGGA
GTTAATCTGCTGACTATTATTAAAGGTGCTTTGAGATACCGCCGTTCAAGGAGACATGAT
TACGTTTCTGATTTTCTGCCTCCTAGTATGTCAGAACTGAAACGTGCATTCGATCAACAA
AATAGACTACTTCGCTTTGGTGCTAGTCCAATAATGTTCTCAACTTTGGAAAATGGAAAG
ATAGTGAAAGGCATTGCAGGAGTTCCAAATGAAGGTCCTGTCTTGTTGGTGGGCTATCAC
ATGCTGATGGGATTAGAACTTTCTTTCCTCATAGAAGAATTCTTGCGTGAGAAGAATATT
ATGGTTCGTGGCGTAGCACATCCAGAGTTGTTCTTAGAGAGGCGTGCAAGTCCATCTGAT
GAATTTTCCTATTTTGATTGGACAAGAATATATGGTGCAGTACCTGTAACAGCAAGCAAC
CTTTTCAAGTTGTTTTCAAAAAAATCACATATTCTCCTTTATCCTGGTGGTGCACGTGAG
GCTCTACATCGCAAGGGTGAAGAATATCAGTTATTTTGGCCTGATCAGCCAGAATTTGTG
CGGATGGCAGCACATTTTGGGGCCACAATTGTACCATTTGGAGTTGTTGGAGAAGATGAC
ATAGCAGAACTTGTTCTCGACTATGATGACCTGATGAGAATCCCCTTGGTTAATGACTAT
ATTAAAGAAACTACTCGGGATGCTGTAAGACCCAGGGCTGGTTTCAGTGGTGAGGTTGGT
AATGAAAATCTCTTTGTACCAGTGCTTTTTCCTAAGGTTCCTGGACGCTTCTACTATCTG
TTTGGGAAGCCAATAGAAACAAAGGGAAGAGAAAATGAGCTGAAGAACAAAGAAAATGCA
AATGTATTGTACTTGCAGATAAAATCCGAGATTGAACATATTATGGCCTACTTGATTAAG
AAGCGAGAGAAGGATCCTTACAGGGGTATCATTGATAGAACTATATATCAGGCGATTTCT
GCTCCCCCTGGTCAAGTCCCAACATTTGATCCATGA

Peptide Sequence

PEP ID

VIT_14s0030g01340.t01
PEP Infomation

pep chromosome:12X:14:5857829:5919059:-1 gene:VIT_14s0030g01340 transcript:VIT_14s0030g01340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASVSSFRVALPSFVLKSECKSRNRAQIQCLTGPDSSMVSSDSVLVNGASVVGDKSKIEP
LINGENRRLGSKVEEKKSVKYDVKEQLEVLWDDGYGTETVKDYLEISKEMIRPDGGPPRW
FCPVACGQPLKDSPVLLFLPGIDGVGLGLILHHKALGKVFEVRCMHIPVYDRTPFEGLVK
LVEKTVRLEHASSPNKPIYLLGESFGGCLALAVAARNPTIDLVVILVNPATSFGRSQLQP
LLPILESLPDGLHFTVPYLLSFIMGDPMKMAMVNIDSTLPPPFVVEQLSGNLTALLPCLS
GLSDIIPKDTLHWKLKLLKSAAAYANSRLHAVKAEVLLLASGKDNMLPSGDEARRLWNLL
QNCRVRYFKDNGHTLLLEDGVNLLTIIKGALRYRRSRRHDYVSDFLPPSMSELKRAFDQQ
NRLLRFGASPIMFSTLENGKIVKGIAGVPNEGPVLLVGYHMLMGLELSFLIEEFLREKNI
MVRGVAHPELFLERRASPSDEFSYFDWTRIYGAVPVTASNLFKLFSKKSHILLYPGGARE
ALHRKGEEYQLFWPDQPEFVRMAAHFGATIVPFGVVGEDDIAELVLDYDDLMRIPLVNDY
IKETTRDAVRPRAGFSGEVGNENLFVPVLFPKVPGRFYYLFGKPIETKGRENELKNKENA
NVLYLQIKSEIEHIMAYLIKKREKDPYRGIIDRTIYQAISAPPGQVPTFDP

Transcript Sequence

Transcript ID

VIT_14s0030g01340.t01
Transcript Infomation

cdna chromosome:12X:14:5857829:5919059:-1 gene:VIT_14s0030g01340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGGTGTATTGGTGTATTGTATATTCCATGCCATGGCATCAGTTTCAAGTTTCCGGGTGG
CTCTGCCTAGTTTTGTGCTCAAGTCAGAGTGTAAGTCTAGGAATCGAGCACAAATTCAGT
GTTTAACGGGCCCTGATTCGTCCATGGTGTCTTCTGATTCAGTTTTAGTAAATGGAGCTT
CTGTTGTTGGAGATAAGTCCAAAATTGAGCCTTTGATCAATGGTGAGAATAGGAGGTTAG
GGTCTAAAGTTGAGGAGAAGAAGAGTGTGAAATATGATGTCAAGGAACAGTTAGAAGTGT
TGTGGGATGATGGTTATGGGACTGAGACTGTAAAAGATTACCTTGAGATATCCAAGGAGA
TGATTAGGCCAGATGGGGGGCCACCCCGGTGGTTTTGCCCAGTGGCCTGTGGGCAGCCTT
TGAAGGATTCCCCTGTTCTTTTGTTTTTGCCAGGTATAGATGGTGTTGGATTGGGCCTCA
TTTTACACCATAAAGCTCTTGGCAAGGTTTTTGAAGTTCGGTGCATGCATATTCCTGTTT
ATGATCGAACGCCATTTGAAGGTCTGGTGAAACTTGTGGAAAAAACTGTGAGGCTTGAGC
ATGCTTCATCTCCAAATAAACCCATTTATTTGTTAGGAGAGTCATTTGGAGGATGCCTGG
CACTTGCTGTTGCTGCTCGTAATCCTACCATTGACCTGGTAGTGATATTAGTAAATCCAG
CAACATCATTTGGGAGGTCACAGCTGCAACCTTTGCTCCCTATATTGGAGTCTTTGCCTG
ATGGACTTCATTTCACAGTGCCTTATCTGCTCAGCTTTATTATGGGAGATCCAATGAAGA
TGGCAATGGTCAATATTGATAGTACACTTCCTCCTCCATTTGTAGTTGAACAATTATCTG
GGAACCTCACTGCTTTGCTACCATGTCTTTCTGGCTTGTCTGACATCATACCCAAAGACA
CTCTTCATTGGAAGCTGAAGCTGCTTAAATCAGCTGCTGCTTATGCTAATTCCCGCCTCC
ATGCTGTTAAAGCTGAAGTACTTTTGCTTGCTAGTGGCAAGGACAACATGCTTCCTAGTG
GAGATGAAGCTCGACGACTTTGGAATTTACTACAGAATTGTAGAGTTCGTTACTTCAAGG
ACAATGGGCATACCCTCTTACTGGAGGATGGAGTTAATCTGCTGACTATTATTAAAGGTG
CTTTGAGATACCGCCGTTCAAGGAGACATGATTACGTTTCTGATTTTCTGCCTCCTAGTA
TGTCAGAACTGAAACGTGCATTCGATCAACAAAATAGACTACTTCGCTTTGGTGCTAGTC
CAATAATGTTCTCAACTTTGGAAAATGGAAAGATAGTGAAAGGCATTGCAGGAGTTCCAA
ATGAAGGTCCTGTCTTGTTGGTGGGCTATCACATGCTGATGGGATTAGAACTTTCTTTCC
TCATAGAAGAATTCTTGCGTGAGAAGAATATTATGGTTCGTGGCGTAGCACATCCAGAGT
TGTTCTTAGAGAGGCGTGCAAGTCCATCTGATGAATTTTCCTATTTTGATTGGACAAGAA
TATATGGTGCAGTACCTGTAACAGCAAGCAACCTTTTCAAGTTGTTTTCAAAAAAATCAC
ATATTCTCCTTTATCCTGGTGGTGCACGTGAGGCTCTACATCGCAAGGGTGAAGAATATC
AGTTATTTTGGCCTGATCAGCCAGAATTTGTGCGGATGGCAGCACATTTTGGGGCCACAA
TTGTACCATTTGGAGTTGTTGGAGAAGATGACATAGCAGAACTTGTTCTCGACTATGATG
ACCTGATGAGAATCCCCTTGGTTAATGACTATATTAAAGAAACTACTCGGGATGCTGTAA
GACCCAGGGCTGGTTTCAGTGGTGAGGTTGGTAATGAAAATCTCTTTGTACCAGTGCTTT
TTCCTAAGGTTCCTGGACGCTTCTACTATCTGTTTGGGAAGCCAATAGAAACAAAGGGAA
GAGAAAATGAGCTGAAGAACAAAGAAAATGCAAATGTATTGTACTTGCAGATAAAATCCG
AGATTGAACATATTATGGCCTACTTGATTAAGAAGCGAGAGAAGGATCCTTACAGGGGTA
TCATTGATAGAACTATATATCAGGCGATTTCTGCTCCCCCTGGTCAAGTCCCAACATTTG
ATCCATGAAAGAGCTAGTTCAGAAGGTAGATCACATACCATTTTCTACATGTAAAGTGGT
GTATGTACAAATATATAATAGTGTGGTGA