Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_14s0030g00540.t01
CDS Infomation

cds chromosome:12X:14:4530859:4536575:-1 gene:VIT_14s0030g00540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTGAAGTTGAATGATCAAGAATTCCTTGGGGAAGGCGGTTGTGTTCTGTCAGAGATA
GTGACTAAACAAGGCCAGAGCTTAACCCTAGATCTTCATAACAGAAATGGGAACAGGGGT
TTGAAAAACCTAGGGAAACTCACTGTCCATGCAGAGGAAACAGTTGCTTCAAGGAATGCT
ATTGAGGTTATATTCCATTGTTCACGCTTAGAAAACAAGGACTTGTTTTCTAAAAGTGAC
CCTTTTTTAAGAATATCTAGGATTGTTGAAAATGGAGGTTCTATTCCAATTTGCAAGACA
GAAGTGGTTGATAACAACTTGAATCCAATCTGGAGGCCTTTATGTCTGACAATGCAGCAA
TTTGTTAGCAAGGATAACCCATTAGTTATCGAGTGCTTTGATTTCAATAGTAGTGGGAAT
CATGTACTGATTGGTAAACTTCAGAAATCAGTGGCAGACCTGGAAAAACTTCATAAACAA
AAAACTGGTGCCAATTTCATCTTACCCTCTTCTGCTCAGCATGGTTATGAGAAGGTTCTG
AAGGGCCAGCTATTTGTTGATCAATTTTGTGAGAAGCCTCTATACAGTTTTATTGATTAT
GTTTCTAGTGGATTTGAACTTAATTTTATGGTTGCTGTCGATTTTACCGCATCAAATGGA
AATCCGCGAACTCCAGATTCTTTGCACTACATTGATCCTTCTGGCCAGTTCAATGCTTAC
CAACAGGCTATAATGGAGGTTGGAGAGGTAATACAATTTTATGATTCTGATAAGCGCTTT
CCTGCATGGGGATTTGGGGGAAGGACAATTGATGGTACCATATCACATTGTTTTAACTTG
AATGGAAGTGCTAGTGGCGTTGAGGTTGAAGGGGTCCAAGGGATCATGGCTGCCTATGCA
AGTGCACTGAACCATGTTGCTCTGGCGGGACCGACTTTATTTGGACAAGTGATCAACAAT
GCAGCTGAAATTGCTGGCCAGTCCCTCTCCTATAGCAGCTGCAAATATTTTGTTTTGCTT
ATCATAACGGATGGAGTACTTACAGATCTCCAAGAAACAAAAGATGCTTTGGTCAGGGCA
TCTGATTTGCCCTTATCAATTCTGATAGTTGGAGTGAGAGGAGCAGATTTTAAACAAATG
GAGATCCTTGATGCTGATGATGGTCGTCGGCTAGAGAGTTCTACAGGACGTGTGGCAACT
CGAGATATTGTACAGTTTGTTCCCATGAGGGAAGTGCGTGCAGGTGGGCAAACTTCCGTA
GTCCAAGCTCTATTAGAAGAGCTACCTGGGCAGTTCCTGACTTACATGAGAAGCAGAGAT
ATTAAACCCGGTGCAGTCAACATAGCTCAAACATCTGCTTCCCATGCCACCATCTAG

Peptide Sequence

PEP ID

VIT_14s0030g00540.t01
PEP Infomation

pep chromosome:12X:14:4530859:4536575:-1 gene:VIT_14s0030g00540 transcript:VIT_14s0030g00540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLKLNDQEFLGEGGCVLSEIVTKQGQSLTLDLHNRNGNRGLKNLGKLTVHAEETVASRNA
IEVIFHCSRLENKDLFSKSDPFLRISRIVENGGSIPICKTEVVDNNLNPIWRPLCLTMQQ
FVSKDNPLVIECFDFNSSGNHVLIGKLQKSVADLEKLHKQKTGANFILPSSAQHGYEKVL
KGQLFVDQFCEKPLYSFIDYVSSGFELNFMVAVDFTASNGNPRTPDSLHYIDPSGQFNAY
QQAIMEVGEVIQFYDSDKRFPAWGFGGRTIDGTISHCFNLNGSASGVEVEGVQGIMAAYA
SALNHVALAGPTLFGQVINNAAEIAGQSLSYSSCKYFVLLIITDGVLTDLQETKDALVRA
SDLPLSILIVGVRGADFKQMEILDADDGRRLESSTGRVATRDIVQFVPMREVRAGGQTSV
VQALLEELPGQFLTYMRSRDIKPGAVNIAQTSASHATI

Transcript Sequence

Transcript ID

VIT_14s0030g00540.t01
Transcript Infomation

cdna chromosome:12X:14:4530859:4536575:-1 gene:VIT_14s0030g00540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGTGATCCTATGGTAGTAGTATATACTAAGAAAAGAGATGGAACACTTGAGGAACTTG
GGCGCACAGAAGTAATAATGAACAGCTTGAATCCAGCTTGGATTAAAAAAATTACTGTTG
CCTATCACTTTGAGATTGTTCAACCATTGATGTAAGCATGTTATATTTCTATATTTCACG
TGTATGATGTTGATACAAAATATTTCAATTTACCTGTGAAGTTAAACTTTATACTTTATG
ACCTTGCAGATGCTGAAGTTGAATGATCAAGAATTCCTTGGGGAAGGCGGTTGTGTTCTG
TCAGAGATAGTGACTAAACAAGGCCAGAGCTTAACCCTAGATCTTCATAACAGAAATGGG
AACAGGGGTTTGAAAAACCTAGGGAAACTCACTGTCCATGCAGAGGAAACAGTTGCTTCA
AGGAATGCTATTGAGGTTATATTCCATTGTTCACGCTTAGAAAACAAGGACTTGTTTTCT
AAAAGTGACCCTTTTTTAAGAATATCTAGGATTGTTGAAAATGGAGGTTCTATTCCAATT
TGCAAGACAGAAGTGGTTGATAACAACTTGAATCCAATCTGGAGGCCTTTATGTCTGACA
ATGCAGCAATTTGTTAGCAAGGATAACCCATTAGTTATCGAGTGCTTTGATTTCAATAGT
AGTGGGAATCATGTACTGATTGGTAAACTTCAGAAATCAGTGGCAGACCTGGAAAAACTT
CATAAACAAAAAACTGGTGCCAATTTCATCTTACCCTCTTCTGCTCAGCATGGTTATGAG
AAGGTTCTGAAGGGCCAGCTATTTGTTGATCAATTTTGTGAGAAGCCTCTATACAGTTTT
ATTGATTATGTTTCTAGTGGATTTGAACTTAATTTTATGGTTGCTGTCGATTTTACCGCA
TCAAATGGAAATCCGCGAACTCCAGATTCTTTGCACTACATTGATCCTTCTGGCCAGTTC
AATGCTTACCAACAGGCTATAATGGAGGTTGGAGAGGTAATACAATTTTATGATTCTGAT
AAGCGCTTTCCTGCATGGGGATTTGGGGGAAGGACAATTGATGGTACCATATCACATTGT
TTTAACTTGAATGGAAGTGCTAGTGGCGTTGAGGTTGAAGGGGTCCAAGGGATCATGGCT
GCCTATGCAAGTGCACTGAACCATGTTGCTCTGGCGGGACCGACTTTATTTGGACAAGTG
ATCAACAATGCAGCTGAAATTGCTGGCCAGTCCCTCTCCTATAGCAGCTGCAAATATTTT
GTTTTGCTTATCATAACGGATGGAGTACTTACAGATCTCCAAGAAACAAAAGATGCTTTG
GTCAGGGCATCTGATTTGCCCTTATCAATTCTGATAGTTGGAGTGAGAGGAGCAGATTTT
AAACAAATGGAGATCCTTGATGCTGATGATGGTCGTCGGCTAGAGAGTTCTACAGGACGT
GTGGCAACTCGAGATATTGTACAGTTTGTTCCCATGAGGGAAGTGCGTGCAGGTGGGCAA
ACTTCCGTAGTCCAAGCTCTATTAGAAGAGCTACCTGGGCAGTTCCTGACTTACATGAGA
AGCAGAGATATTAAACCCGGTGCAGTCAACATAGCTCAAACATCTGCTTCCCATGCCACC
ATCTAGTAAGGGTTGTCTCCCATTCATCACTCCAGAGTTCCAAGGCATTGTAAATACCGA
AACTAGGTTGACAATATACATGTCTATAGGATCCACAGATGATTGACATATCCCAAAGGG
AAAAGGTTAGATTACTTAGTCTATACTGGGTACAATCTGTTTTCAAGAATGATGAATTGG
CCCAATTGTAGTAACAATTGATAGCATTGGAATGCACTGATTTGATTACAAATATTCAGA
GTTTCATCAGTGTGTATCATGCATGCCAATTGACCTTTAAGCTTATATTTTTAGGTAGCA
A