Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_14s0006g02490.t01
CDS Infomation

cds chromosome:12X:14:20100734:20103986:1 gene:VIT_14s0006g02490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTCGCCACCTCCGCCTCCCAATTCCGGCGCCAAGCTCCGTCTGATGTGCAGCTAT
AATGGCCACATACTCCCCAGACGCCACGCCAAGTCACTCTGCTACGCCGGTGGTGACACC
CGCATCGTGGCCGTGGACCGCCGAGCCGCCGCCAGCCTCTCTGCCCTCACCACCCAGCTC
TCCCAGACCCTCCAGATTCCGTACCAGTTCACTCTCAAATACCAGCTCCCGCACCACGAC
CTTGACTCCCTTATTTCGCTCACAACCGACGACGACCTCCTTAATATGTTCGAAGAGTAC
GACAATCTCCCCGCCTCACCTACGCCCTCCCGCATCCGATTGTTCCTCTTCCCCTCCAAG
CCCGACTCTCCCGGGTCGGTCCTTCACGACCCGAAGTCTGAGTCGTGGTTCTTGGACGCG
CTCAATAGCAGCGCCAAGGTTATGCAGAAGGGGAATTCATCTGATTCGGGGTTTGGTCAT
TCGGATCCGTTTCCGGCTGAGAACTTGGTTGGTATTAGTAGCGGGGGTTTGGATTCATTT
TCGGTGCCCGAATCGGTCGTATTGGAGACCAATTCGTCGTTTGGGTCGACTTCTTCTTCG
GTTTCTGTATCTAATTTGGCTGCAATGAGGGCTCATGTTGAGGATAGTGGTGTTAATTTG
CAGGACAAGAAGGTTCATTTGCCCTTGTCCGAATCAATTGAAAGTGAAACTGTTGTTGCG
AGTGTCATTTCTCACCCACAGACTGGTGGTCATGAAGACCCAGTTGTTAATATTCCTTTG
GTGGACAACTGGGATTCTTCTAAGCCTGTTGGCTCAGAGAGTAATGTCTCTGATGCATTC
GCTCGGATCCAAATTCATAAGGCAGTTGAGGTTTCTGGTTTTCCATCATCTTTACAGTTG
GATCAGCAGCAACAACAATTGCAATTTGTCCCTGCTGGTGCTCAGTACATAACCCATTAC
CCCACTGGCCCAGTGCCAGTTTCTTCCTACTACCCAATATATCAACCACAGCTGCAACAG
CAGCAGCCAACCTACTATCAATCCAATCGGCCATACCCTGTTTACTTGCTCCCTGTTAGG
CCACCACAACCTTACAACTTCTCCATGCAAGGTAGTCTTATTGACTCTGCTACTGTTGCT
TCTAGTCAGCCCCCAATGCATCTGAATGCAACCATGATTCCATCCCAAGTAGTTTACAAA
GAGGTCACTGCAGCTCCACCCCTGCCTGATTTAGCCACAAAGGTTACTGGAACAGCCCCT
GGGGTTACCCCACTAGTTCATGTGCCATCTAATGAAAATCAGCAGCAATTTGTGAGTATT
CCTCAGATCCATCACCCAACACAGTCTATTCCTATTGCGTCCATGGAAGCTGCCAATTAC
AGTGCATTTGAGGATGATCCTGCACAGAGCCAGATATATAAAAGTCAGCCTCCAGCACCC
ATATTGCCTTCTCAATACCAAACCATGACCAATGCTACAAAAGCACTGTTATCAGAGGCC
TTGGCACAGTCTCAGGCAGACAACATTAAGCAGCAAATCAGAACTCCACAGCCAAAATGA

Peptide Sequence

PEP ID

VIT_14s0006g02490.t01
PEP Infomation

pep chromosome:12X:14:20100734:20103986:1 gene:VIT_14s0006g02490 transcript:VIT_14s0006g02490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MESPPPPPNSGAKLRLMCSYNGHILPRRHAKSLCYAGGDTRIVAVDRRAAASLSALTTQL
SQTLQIPYQFTLKYQLPHHDLDSLISLTTDDDLLNMFEEYDNLPASPTPSRIRLFLFPSK
PDSPGSVLHDPKSESWFLDALNSSAKVMQKGNSSDSGFGHSDPFPAENLVGISSGGLDSF
SVPESVVLETNSSFGSTSSSVSVSNLAAMRAHVEDSGVNLQDKKVHLPLSESIESETVVA
SVISHPQTGGHEDPVVNIPLVDNWDSSKPVGSESNVSDAFARIQIHKAVEVSGFPSSLQL
DQQQQQLQFVPAGAQYITHYPTGPVPVSSYYPIYQPQLQQQQPTYYQSNRPYPVYLLPVR
PPQPYNFSMQGSLIDSATVASSQPPMHLNATMIPSQVVYKEVTAAPPLPDLATKVTGTAP
GVTPLVHVPSNENQQQFVSIPQIHHPTQSIPIASMEAANYSAFEDDPAQSQIYKSQPPAP
ILPSQYQTMTNATKALLSEALAQSQADNIKQQIRTPQPK

Transcript Sequence

Transcript ID

VIT_14s0006g02490.t01
Transcript Infomation

cdna chromosome:12X:14:20100734:20103986:1 gene:VIT_14s0006g02490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAATAATTTTTTTTTAAATAATTCAAATTTTATACCCTTTTAAATCAAAAGTAATATTGA
AGGAGAGTGAGACTGTGAGACACCAACGAACCTGATATTCCCATTCCCAAATACTAATAC
TAAACGCTAAATGGCACGTCAAAATCAACCCTTTATCCTTTAAGAATAAAAGCTAATTAT
TAACTCTATAGTCCGGAGTGGGGGCCCCACGTCACGTGAGCGGGTGATCTGGTTTCAACT
TTCACTAAAATTTAAAACGACGTGGACTGCCGACAGGTGACAGGTTACATCCACATATGC
ATCCTCAGATTGCTATGAAAAAAGATTTATTAACGTTGTAATCAAGCAAACCAAATCCCA
AAATCTCCCTTCAAGCGACGCTCCCCCGAGCCGACCTCCCTCTTCTTCCTCGCTTCTCCC
AAACCCTCCCGCAAGATCCACCATCTATGGAGTCGCCACCTCCGCCTCCCAATTCCGGCG
CCAAGCTCCGTCTGATGTGCAGCTATAATGGCCACATACTCCCCAGACGCCACGCCAAGT
CACTCTGCTACGCCGGTGGTGACACCCGCATCGTGGCCGTGGACCGCCGAGCCGCCGCCA
GCCTCTCTGCCCTCACCACCCAGCTCTCCCAGACCCTCCAGATTCCGTACCAGTTCACTC
TCAAATACCAGCTCCCGCACCACGACCTTGACTCCCTTATTTCGCTCACAACCGACGACG
ACCTCCTTAATATGTTCGAAGAGTACGACAATCTCCCCGCCTCACCTACGCCCTCCCGCA
TCCGATTGTTCCTCTTCCCCTCCAAGCCCGACTCTCCCGGGTCGGTCCTTCACGACCCGA
AGTCTGAGTCGTGGTTCTTGGACGCGCTCAATAGCAGCGCCAAGGTTATGCAGAAGGGGA
ATTCATCTGATTCGGGGTTTGGTCATTCGGATCCGTTTCCGGCTGAGAACTTGGTTGGTA
TTAGTAGCGGGGGTTTGGATTCATTTTCGGTGCCCGAATCGGTCGTATTGGAGACCAATT
CGTCGTTTGGGTCGACTTCTTCTTCGGTTTCTGTATCTAATTTGGCTGCAATGAGGGCTC
ATGTTGAGGATAGTGGTGTTAATTTGCAGGACAAGAAGGTTCATTTGCCCTTGTCCGAAT
CAATTGAAAGTGAAACTGTTGTTGCGAGTGTCATTTCTCACCCACAGACTGGTGGTCATG
AAGACCCAGTTGTTAATATTCCTTTGGTGGACAACTGGGATTCTTCTAAGCCTGTTGGCT
CAGAGAGTAATGTCTCTGATGCATTCGCTCGGATCCAAATTCATAAGGCAGTTGAGGTTT
CTGGTTTTCCATCATCTTTACAGTTGGATCAGCAGCAACAACAATTGCAATTTGTCCCTG
CTGGTGCTCAGTACATAACCCATTACCCCACTGGCCCAGTGCCAGTTTCTTCCTACTACC
CAATATATCAACCACAGCTGCAACAGCAGCAGCCAACCTACTATCAATCCAATCGGCCAT
ACCCTGTTTACTTGCTCCCTGTTAGGCCACCACAACCTTACAACTTCTCCATGCAAGGTA
GTCTTATTGACTCTGCTACTGTTGCTTCTAGTCAGCCCCCAATGCATCTGAATGCAACCA
TGATTCCATCCCAAGTAGTTTACAAAGAGGTCACTGCAGCTCCACCCCTGCCTGATTTAG
CCACAAAGGTTACTGGAACAGCCCCTGGGGTTACCCCACTAGTTCATGTGCCATCTAATG
AAAATCAGCAGCAATTTGTGAGTATTCCTCAGATCCATCACCCAACACAGTCTATTCCTA
TTGCGTCCATGGAAGCTGCCAATTACAGTGCATTTGAGGATGATCCTGCACAGAGCCAGA
TATATAAAAGTCAGCCTCCAGCACCCATATTGCCTTCTCAATACCAAACCATGACCAATG
CTACAAAAGCACTGTTATCAGAGGCCTTGGCACAGTCTCAGGCAGACAACATTAAGCAGC
AAATCAGAACTCCACAGCCAAAATGAGCTAGTTTTCAAGAATACAATTTTGACAGAAATC
TTTTGGTAATTTTATCTTTGAACTTTCTGTTTTGGTTTCTCATCTTGGTATGGTTATTGT
CAGTCTTCTTTCTTACTTTCTCTATGTCATGATATTCATCAGGTTATATGTAGTGTCTGA
GATTATAGATTTATATGGAAAATTTTTATATACACATGTGCTTATCAAATATTGCAGATC
TTCAAGTGTTTTAGAAATGGTATAGCTTATCTTATTCTTCAAGGACACAGTTGTCTAATA
TAAATTGCGGCTGCAGGAGCTTTGGACTTCTCATGATGGGGATCATCCATTTGAGTAATA
ATGACTTAGGATCACCATTCATTCACTCAACACTGGCACCGCACTCTCAGTAATGATAAG
GATGTCATCTTCCTTTTCCTTTTTCTTCTTGATTTTTTCCTTTCACTCACCTCATTATGT
TTATGACAGCCATTGCTTTTTTCTGTCTGGCTGGGGTAAACGGTCATTCCAGCTGGCATG
TCATTTCTTTGATTGTAATTGTGTCTTCCTTTTGAGTTTGTGGCATTTGTGTGCTATTGA
TTGTTCTCTATGATCCTGGGGTCTGATTGGTACATGGGAATAAGAATGAAAA