Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_14s0006g01880.t01
CDS Infomation

cds chromosome:12X:14:18484299:18501260:1 gene:VIT_14s0006g01880 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F6HSM4]
Sequence

ATGGAGAGGAGCTTAACTCTAACGTATGCAGCGTCAGCCTCAAGACCACTATGCTTCAAT
CGCAGTCCTTCATCATCATCGTTATGGCTTCCAAGCACTAGCAGAAGCAGTAGAAAGGGA
AGAGCCGTTTCAATGGTTAAGGCATCCTCTGCCTCGAGACCGACCCTCGCTTCGAATTGG
GATCTCTCCAGTCTTCAGTCTGCTTCAGCCCCCACTTGGCTGCCCAGATTCGAAGATCTT
GACACCACTAACATGCTCCTACGCCAGCGAATCGTGTTCTTGGGCTCTCAGGTGGATGAC
ATGACTGCAGATTTGGTCATAAGTCAGCTCTTATTTTTGGATGCTGAAGACCAGGAAAAG
GACATCAAGTTATTTATCAATTCACCTGGTGGCTCTGTTACTGCTGGATTGGGGATATAT
GATGCGATGAAGTTGTGCAAAGCTGATGTTTCTACTGTTTGCCTGGGGCTTGCTGCATCT
ATGGGTGCCTTTCTTCTTGCTTCTGGTTCAAAAGGAAAAAGGTTTTGCATGCCAAATTCA
AGAGTGATGATCCATCAACCTCTTGGAACGGCCGGGGGCAAGGCAACAGAGATGGGGATA
CGAATCCGAGAAATGATGTACCACAAAATTAAGCTGAATAAGATACTGTCAAGAATCACA
GGGAAACCTGAACAACAGATAGAAGCAGATACTGACCGTGATAATTTCATGAATGCTTGG
GAGGCAAAAGAGTATGGATTGATTGATGCAGTTATTGATGATGGAAAGCCAGGATTAGTT
GCACCCACCGCAGATGCAGGACCTCCTCCAAAAACGCGGGTTTGGGGTCTGTGGAAAGTT
GAAGGGAGTAGGAAAGCCAAAAAGAATCTACCCTCAGAGCATAAACTTTTGCAAAATGGG
CACCAAGGAGGTGATGATGAGAAAGGCACAGAACAAGAAAAGGAAGCATCATCACCAGTA
TGA

Peptide Sequence

PEP ID

VIT_14s0006g01880.t01
PEP Infomation

pep chromosome:12X:14:18484299:18501260:1 gene:VIT_14s0006g01880 transcript:VIT_14s0006g01880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F6HSM4]
Sequence

MERSLTLTYAASASRPLCFNRSPSSSSLWLPSTSRSSRKGRAVSMVKASSASRPTLASNW
DLSSLQSASAPTWLPRFEDLDTTNMLLRQRIVFLGSQVDDMTADLVISQLLFLDAEDQEK
DIKLFINSPGGSVTAGLGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNS
RVMIHQPLGTAGGKATEMGIRIREMMYHKIKLNKILSRITGKPEQQIEADTDRDNFMNAW
EAKEYGLIDAVIDDGKPGLVAPTADAGPPPKTRVWGLWKVEGSRKAKKNLPSEHKLLQNG
HQGGDDEKGTEQEKEASSPV

Transcript Sequence

Transcript ID

VIT_14s0006g01880.t01
Transcript Infomation

cdna chromosome:12X:14:18484299:18501260:1 gene:VIT_14s0006g01880 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:F6HSM4]
Sequence

GAGGAAAAAGGAGAAGGAAAAGAAAGAGAGAAGAACCAGAGATGGAGAGGAGCTTAACTC
TAACGTATGCAGCGTCAGCCTCAAGACCACTATGCTTCAATCGCAGTCCTTCATCATCAT
CGTTATGGCTTCCAAGCACTAGCAGAAGCAGTAGAAAGGGAAGAGCCGTTTCAATGGTTA
AGGCATCCTCTGCCTCGAGACCGACCCTCGCTTCGAATTGGGATCTCTCCAGTCTTCAGT
CTGCTTCAGCCCCCACTTGGCTGCCCAGATTCGAAGATCTTGACACCACTAACATGCTCC
TACGCCAGCGAATCGTGTTCTTGGGCTCTCAGGTGGATGACATGACTGCAGATTTGGTCA
TAAGTCAGCTCTTATTTTTGGATGCTGAAGACCAGGAAAAGGACATCAAGTTATTTATCA
ATTCACCTGGTGGCTCTGTTACTGCTGGATTGGGGATATATGATGCGATGAAGTTGTGCA
AAGCTGATGTTTCTACTGTTTGCCTGGGGCTTGCTGCATCTATGGGTGCCTTTCTTCTTG
CTTCTGGTTCAAAAGGAAAAAGGTTTTGCATGCCAAATTCAAGAGTGATGATCCATCAAC
CTCTTGGAACGGCCGGGGGCAAGGCAACAGAGATGGGGATACGAATCCGAGAAATGATGT
ACCACAAAATTAAGCTGAATAAGATACTGTCAAGAATCACAGGGAAACCTGAACAACAGA
TAGAAGCAGATACTGACCGTGATAATTTCATGAATGCTTGGGAGGCAAAAGAGTATGGAT
TGATTGATGCAGTTATTGATGATGGAAAGCCAGGATTAGTTGCACCCACCGCAGATGCAG
GACCTCCTCCAAAAACGCGGGTTTGGGGTCTGTGGAAAGTTGAAGGGAGTAGGAAAGCCA
AAAAGAATCTACCCTCAGAGCATAAACTTTTGCAAAATGGGCACCAAGGAGGTGATGATG
AGAAAGGCACAGAACAAGAAAAGGAAGCATCATCACCAGTATGAGGATGAAGCCAGGAAT
ATGGTTTGTTCACCTTGTAATGTTTTACCGCTCACTGCAGTCAAGTTAGCTAATTGTTTT
GAGTGGCTTGATCAATGCAAAGCATTTAGAGAAATGGAACAATTGTGAGGGATCCTTCAC
ACTTACTGAGTAGAAGTACTTAAGTCCCCTATAACTTAAAATTTTGCTTTTTAC