Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0320g00030.t01
CDS Infomation

cds chromosome:12X:13:24322704:24324521:-1 gene:VIT_13s0320g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAATTGTCTCACGGTCTCTTCTGCAAGCGACGTCTCCAAGAAGCGCAAGTCTTTG
GCTATTGAAACCTCCTTCAAGCTTCCTGCTCCGATGCCCACTTGGCCTCCAGGTGAAGGT
TTTGCGGGTGGAACCATTGATCTTGGAGGGGGATTAGAAGTCTGTCAGATATCATCTTTC
ACCAAAGTTTGGGCAACCCATGAAGGGGGACCAGATAACCTGGGCGCCACGTTCTTCGAA
CCTTCCCCAATGCCGGAGGAATTCTGCATGCTGGGTTGCTACAGCCAGCCCAACAAGAAG
CCTCTCTTCGGGTGGGTTCTTGCTGGGAAAGATAACACAAATAACCCCTTGGGTGGGGCT
CTGAAGAAGCCAATTGATTACACCCTTGTTTGGAGCAGTGAGTCCTTGAAAATTAAGCAA
GATGGCAATGGCTATGTCTGGCTTCCCACACCCCCAGATGGTTATAAAGCCGTTGGTCAT
GTTATCACAAACTTACCTGAGAAGCCTTCCCTGGATAAAATCCGCTGTGTTCGCTCCGAC
CTTACGGACCTATGTGAGGCTGATACGTGGATTTGGGGACTAGATAAGGTGGCCAATGCA
AATGGGTTCAATGTATATGACTTGCAACCCAGCGACAGAGGGGCACAGGCTCTCGCTGTA
TCTGTAGGTACATTTGTGGCACAAAATGGTGGGGCTGCTTCTTCTTTATCTCTAGCCTGT
TTAAAGAACATCAGTTCTAATTTGTATGCTATGCCTAATCTAGCCCAAGTCGATGCCTTA
GTTCAAGCATATTCTCCCTGGGTTTATTTGCATCCTGATGAACAATACCTCCCTTCTTCA
GTCTCCTGGTTTTTCCAGAATGGGGCACTACTATACCAACAGGGGGAGGAGTCTAAACCT
GTCAACATCGATCCCACTGGCTCAAACCTTCCCCAAGGCGGATCAAATGATGGTGCCTAC
TGGTTGGACCTTCCTGTGGATGCGAAGGCCAAAGAAACTGTCAAGAAAGGAGATTTACAA
GATTCCATGACTTATATGCATATAAAACCTATGTTGGGCGCAACATTCACCGACATTGCC
ATCTGGATTTTCTACCCATTTAATGGCCCTGCAAGGGCTAAAGTTGAGTTAATCAATATT
TCACTGGGTAAGATAGGCGAACATGTGGGTGATTGGGAGCATGTGACCCTTAGAGTGAGC
AACTTCAATGGAAAGCTTATGAACGTCTTTTTCTCAGAGCACAGTTCAGGAACATGGGTG
AACGCTTCCGAGCTTGAGTTCCAAAATGGTAACAAAGTGGTAAGCTATGCGTCCTTACAT
GGCCACGCCTTCTATCCGAAGCCCGGACTTGTTTTACAAGGGAGTGGGGCAATGGGAATA
AGGAATGACACAGCAAAGAGTAAGATGGTCATGGATACTGGAACCAGGTATATAGTAGTT
GCAGCTGAATATTTGGGCTCTGCAGTAGTTGAACCACCATGGTTGAACTACTATAGGAAA
TGGGGTCCAAAAATTAGTTATGACCTCGCAGCTGAGATCAAAGAGGTGGAAAAATTATTG
CCTGGGAAGCTGAAATCTGCTTTTGAGAAGCTTGTGAAAAGTCTTCCAAATGAAATCTTG
GGGGAGGAAGGGCCTACTGGCCCCAAGATGAAAAAGAATTGGGATGGGGATGAAGTTTGA

Peptide Sequence

PEP ID

VIT_13s0320g00030.t01
PEP Infomation

pep chromosome:12X:13:24322704:24324521:-1 gene:VIT_13s0320g00030 transcript:VIT_13s0320g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGNCLTVSSASDVSKKRKSLAIETSFKLPAPMPTWPPGEGFAGGTIDLGGGLEVCQISSF
TKVWATHEGGPDNLGATFFEPSPMPEEFCMLGCYSQPNKKPLFGWVLAGKDNTNNPLGGA
LKKPIDYTLVWSSESLKIKQDGNGYVWLPTPPDGYKAVGHVITNLPEKPSLDKIRCVRSD
LTDLCEADTWIWGLDKVANANGFNVYDLQPSDRGAQALAVSVGTFVAQNGGAASSLSLAC
LKNISSNLYAMPNLAQVDALVQAYSPWVYLHPDEQYLPSSVSWFFQNGALLYQQGEESKP
VNIDPTGSNLPQGGSNDGAYWLDLPVDAKAKETVKKGDLQDSMTYMHIKPMLGATFTDIA
IWIFYPFNGPARAKVELINISLGKIGEHVGDWEHVTLRVSNFNGKLMNVFFSEHSSGTWV
NASELEFQNGNKVVSYASLHGHAFYPKPGLVLQGSGAMGIRNDTAKSKMVMDTGTRYIVV
AAEYLGSAVVEPPWLNYYRKWGPKISYDLAAEIKEVEKLLPGKLKSAFEKLVKSLPNEIL
GEEGPTGPKMKKNWDGDEV

Transcript Sequence

Transcript ID

VIT_13s0320g00030.t01
Transcript Infomation

cdna chromosome:12X:13:24322704:24324521:-1 gene:VIT_13s0320g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCATTCACGATCGATCCTTTTTCCTTTATCAGTCACAGATGGGGAATTGTCTCACGGTCT
CTTCTGCAAGCGACGTCTCCAAGAAGCGCAAGTCTTTGGCTATTGAAACCTCCTTCAAGC
TTCCTGCTCCGATGCCCACTTGGCCTCCAGGTGAAGGTTTTGCGGGTGGAACCATTGATC
TTGGAGGGGGATTAGAAGTCTGTCAGATATCATCTTTCACCAAAGTTTGGGCAACCCATG
AAGGGGGACCAGATAACCTGGGCGCCACGTTCTTCGAACCTTCCCCAATGCCGGAGGAAT
TCTGCATGCTGGGTTGCTACAGCCAGCCCAACAAGAAGCCTCTCTTCGGGTGGGTTCTTG
CTGGGAAAGATAACACAAATAACCCCTTGGGTGGGGCTCTGAAGAAGCCAATTGATTACA
CCCTTGTTTGGAGCAGTGAGTCCTTGAAAATTAAGCAAGATGGCAATGGCTATGTCTGGC
TTCCCACACCCCCAGATGGTTATAAAGCCGTTGGTCATGTTATCACAAACTTACCTGAGA
AGCCTTCCCTGGATAAAATCCGCTGTGTTCGCTCCGACCTTACGGACCTATGTGAGGCTG
ATACGTGGATTTGGGGACTAGATAAGGTGGCCAATGCAAATGGGTTCAATGTATATGACT
TGCAACCCAGCGACAGAGGGGCACAGGCTCTCGCTGTATCTGTAGGTACATTTGTGGCAC
AAAATGGTGGGGCTGCTTCTTCTTTATCTCTAGCCTGTTTAAAGAACATCAGTTCTAATT
TGTATGCTATGCCTAATCTAGCCCAAGTCGATGCCTTAGTTCAAGCATATTCTCCCTGGG
TTTATTTGCATCCTGATGAACAATACCTCCCTTCTTCAGTCTCCTGGTTTTTCCAGAATG
GGGCACTACTATACCAACAGGGGGAGGAGTCTAAACCTGTCAACATCGATCCCACTGGCT
CAAACCTTCCCCAAGGCGGATCAAATGATGGTGCCTACTGGTTGGACCTTCCTGTGGATG
CGAAGGCCAAAGAAACTGTCAAGAAAGGAGATTTACAAGATTCCATGACTTATATGCATA
TAAAACCTATGTTGGGCGCAACATTCACCGACATTGCCATCTGGATTTTCTACCCATTTA
ATGGCCCTGCAAGGGCTAAAGTTGAGTTAATCAATATTTCACTGGGTAAGATAGGCGAAC
ATGTGGGTGATTGGGAGCATGTGACCCTTAGAGTGAGCAACTTCAATGGAAAGCTTATGA
ACGTCTTTTTCTCAGAGCACAGTTCAGGAACATGGGTGAACGCTTCCGAGCTTGAGTTCC
AAAATGGTAACAAAGTGGTAAGCTATGCGTCCTTACATGGCCACGCCTTCTATCCGAAGC
CCGGACTTGTTTTACAAGGGAGTGGGGCAATGGGAATAAGGAATGACACAGCAAAGAGTA
AGATGGTCATGGATACTGGAACCAGGTATATAGTAGTTGCAGCTGAATATTTGGGCTCTG
CAGTAGTTGAACCACCATGGTTGAACTACTATAGGAAATGGGGTCCAAAAATTAGTTATG
ACCTCGCAGCTGAGATCAAAGAGGTGGAAAAATTATTGCCTGGGAAGCTGAAATCTGCTT
TTGAGAAGCTTGTGAAAAGTCTTCCAAATGAAATCTTGGGGGAGGAAGGGCCTACTGGCC
CCAAGATGAAAAAGAATTGGGATGGGGATGAAGTTTGAAGGTTCAACTTT