Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0175g00180.t01
CDS Infomation

cds chromosome:12X:13:15150419:15166989:1 gene:VIT_13s0175g00180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGCTCGCCAACGCCCGGAGCGCACTCAAACGCAAACGAAACGACGCCATTGAACCC
TTCGACAACGGCACCGCCGCCGCCGCTACCACCGACGTCTCCTCTATTGACCTCTCTCTC
CTGGAGGCCGTAGAGAAGTCACAAACCACTGTGGAAGTTCTCGACCTGAAAACCCTAAAA
AAGCTGGTCCTCGCCTTCGAGCGCCGTCTCCGTGACAATATCGAAGCCCGGTTGAAATAC
CCGGATCAACCCGATAAGTTCGCTGACTCCGAAATTGAGCTCCACGATGAGATCCAACGC
CTTAAGACCCTCGCCGGTGGGCCTGAACTTTATCCCGATTTGGTCAATCTCAACGTAATC
CCTTCTATTCTCGGCTTGTTGTCGCACGACAACTCCGACATCGCTGTCGACGTCGTTGGG
CTCCTCCAAGACCTCACCGACGAGGACGTGTTGGAGGACAATGACGAGCCGGCTAGGGTT
TTGGTGGACGCGTTGATTGAGAACAATGTGTTGGAGCTTCTGGTTCAGAATCTGACCCGG
TTGTCGGAGTCCGACCCGGATGAGATGGCCGCGGTCTATGCTACCCTCTCCACCCTTGAG
AATTTGATTGAGGTGAAGCCAGCTGTGGCGGAGATGGTCTGCGAAAGGACTAAGCTGATG
CGGTGGCTGTTGGGAAAGATAAAGGTGAGGGAGTTCGATAGTAATAAGCAGTATGCATCG
GAGATTTTGGCCATTTTGTTGCAGAACAGTGCAGCAAATCAGCGGCGGTTGGGGCAGATG
AATGGGGTTGATGTGGTGCTTCAGGCGGTGGCAATGTACAAGTCACGGGACCCGAAGACA
GCAGATGAGGAGGAGATGGTGGAGAATTTGTTTGATTGCTTGTGTTGCTTGTTGATGCCG
TTGGAGAATAAAGAAAGATTCGTCAGAGCTGAGGGGGTTGAGTTGATGATCATTATTATG
AAGCAGAAGAAGTTGGCTTATGGCTCCGCCATAAGAGCACTTGATTTTGCGATGACAAAG
TATCCACCGGCATGTGAGCGGTTTGTGGATGTGTTGGGCTTGAAGACTGCATTTGCGGCT
TTCATGGGTAAGATTCCTATGAGCAAGAAGAATAAGAAAGAACGCTACCAAGAAGAGTTA
GAAGAGCGTATTATATCATTGATTGCATCATTATTTGGTGGAATCTTGAGGGGTTCTAGA
AGGGATAGATTGTTAAGTAAGTTTGTGGAAAATGAGTGTGAAAAGATAGACCGTCTTATG
GAACTTTACATAAGATATTCGGACAGAGTTAAAGCTGAGACCAAAAGGATGAACCAACTT
AAACTTGATGATTTAGAGATGGATGAAGATGAAAGATACAATCGACGACTGGAGGCTGGA
CTTTACACTCTTCAGTTGATTTCAATCATTTTGGGTCATCTTTGGTCTTCTGAGAATCCC
CGGATGCGAGCGAGAATTGAACTACTACTCAAGCAGCAAAGAATTACCAAAGAGGACATC
ATAGATATACTTCAGGAATATCATGACAACATTGGAGATGTTGATGGACCGGAGGAAAAG
GAGCGTGCACAGGCAAAGATCCAAAAGTTCATCTTAGCCTTTTGA

Peptide Sequence

PEP ID

VIT_13s0175g00180.t01
PEP Infomation

pep chromosome:12X:13:15150419:15166989:1 gene:VIT_13s0175g00180 transcript:VIT_13s0175g00180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MELANARSALKRKRNDAIEPFDNGTAAAATTDVSSIDLSLLEAVEKSQTTVEVLDLKTLK
KLVLAFERRLRDNIEARLKYPDQPDKFADSEIELHDEIQRLKTLAGGPELYPDLVNLNVI
PSILGLLSHDNSDIAVDVVGLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNLTR
LSESDPDEMAAVYATLSTLENLIEVKPAVAEMVCERTKLMRWLLGKIKVREFDSNKQYAS
EILAILLQNSAANQRRLGQMNGVDVVLQAVAMYKSRDPKTADEEEMVENLFDCLCCLLMP
LENKERFVRAEGVELMIIIMKQKKLAYGSAIRALDFAMTKYPPACERFVDVLGLKTAFAA
FMGKIPMSKKNKKERYQEELEERIISLIASLFGGILRGSRRDRLLSKFVENECEKIDRLM
ELYIRYSDRVKAETKRMNQLKLDDLEMDEDERYNRRLEAGLYTLQLISIILGHLWSSENP
RMRARIELLLKQQRITKEDIIDILQEYHDNIGDVDGPEEKERAQAKIQKFILAF

Transcript Sequence

Transcript ID

VIT_13s0175g00180.t01
Transcript Infomation

cdna chromosome:12X:13:15150419:15166989:1 gene:VIT_13s0175g00180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGACACTTGATAGTAGGGTTTACAACATCCTCCTCCTGGCAATGGAGCTCGCCAACGCC
CGGAGCGCACTCAAACGCAAACGAAACGACGCCATTGAACCCTTCGACAACGGCACCGCC
GCCGCCGCTACCACCGACGTCTCCTCTATTGACCTCTCTCTCCTGGAGGCCGTAGAGAAG
TCACAAACCACTGTGGAAGTTCTCGACCTGAAAACCCTAAAAAAGCTGGTCCTCGCCTTC
GAGCGCCGTCTCCGTGACAATATCGAAGCCCGGTTGAAATACCCGGATCAACCCGATAAG
TTCGCTGACTCCGAAATTGAGCTCCACGATGAGATCCAACGCCTTAAGACCCTCGCCGGT
GGGCCTGAACTTTATCCCGATTTGGTCAATCTCAACGTAATCCCTTCTATTCTCGGCTTG
TTGTCGCACGACAACTCCGACATCGCTGTCGACGTCGTTGGGCTCCTCCAAGACCTCACC
GACGAGGACGTGTTGGAGGACAATGACGAGCCGGCTAGGGTTTTGGTGGACGCGTTGATT
GAGAACAATGTGTTGGAGCTTCTGGTTCAGAATCTGACCCGGTTGTCGGAGTCCGACCCG
GATGAGATGGCCGCGGTCTATGCTACCCTCTCCACCCTTGAGAATTTGATTGAGGTGAAG
CCAGCTGTGGCGGAGATGGTCTGCGAAAGGACTAAGCTGATGCGGTGGCTGTTGGGAAAG
ATAAAGGTGAGGGAGTTCGATAGTAATAAGCAGTATGCATCGGAGATTTTGGCCATTTTG
TTGCAGAACAGTGCAGCAAATCAGCGGCGGTTGGGGCAGATGAATGGGGTTGATGTGGTG
CTTCAGGCGGTGGCAATGTACAAGTCACGGGACCCGAAGACAGCAGATGAGGAGGAGATG
GTGGAGAATTTGTTTGATTGCTTGTGTTGCTTGTTGATGCCGTTGGAGAATAAAGAAAGA
TTCGTCAGAGCTGAGGGGGTTGAGTTGATGATCATTATTATGAAGCAGAAGAAGTTGGCT
TATGGCTCCGCCATAAGAGCACTTGATTTTGCGATGACAAAGTATCCACCGGCATGTGAG
CGGTTTGTGGATGTGTTGGGCTTGAAGACTGCATTTGCGGCTTTCATGGGTAAGATTCCT
ATGAGCAAGAAGAATAAGAAAGAACGCTACCAAGAAGAGTTAGAAGAGCGTATTATATCA
TTGATTGCATCATTATTTGGTGGAATCTTGAGGGGTTCTAGAAGGGATAGATTGTTAAGT
AAGTTTGTGGAAAATGAGTGTGAAAAGATAGACCGTCTTATGGAACTTTACATAAGATAT
TCGGACAGAGTTAAAGCTGAGACCAAAAGGATGAACCAACTTAAACTTGATGATTTAGAG
ATGGATGAAGATGAAAGATACAATCGACGACTGGAGGCTGGACTTTACACTCTTCAGTTG
ATTTCAATCATTTTGGGTCATCTTTGGTCTTCTGAGAATCCCCGGATGCGAGCGAGAATT
GAACTACTACTCAAGCAGCAAAGAATTACCAAAGAGGACATCATAGATATACTTCAGGAA
TATCATGACAACATTGGAGATGTTGATGGACCGGAGGAAAAGGAGCGTGCACAGGCAAAG
ATCCAAAAGTTCATCTTAGCCTTTTGACCAATTGAATGATTCCTCGCAGTTCAAACCTTG
AAAGAAGGTTTTTGGTTCAGGCAGGCATGTAATTTATATTATCGTTTATTTGAATATACA
TTGGTTGAGGGTTAGGTTTGAAGTGGATGCATCAGTGATGTGATTTAGTCATACTTCGGT
TTGGTACTGATTGAGAATATGTCAGCTTAATGTTTAAG