Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0158g00360.t01
CDS Infomation

cds chromosome:12X:13:21214703:21233743:-1 gene:VIT_13s0158g00360 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HHY6]
Sequence

ATGGAGAAGTATTTGAGGGAGAATTTTGACGTTGAGCCGAAGCGAGCTTCGGAGGAAGCT
CGGAGACGATGGAGATCGGCCGTGTCTGTCGTCAAGAATCCCCGGAGACGGTTCCGGATG
GTTGCCGATCTCGCTAAGCGATCCGAAACGGAAAGAAAGCGCCAGAAAATTCAGGAAAAG
ATTCGAGTAGCTTTATACGTGCAAAAGGCAGCATTGCATTTCATTGAGGCGGGTCATCGT
ATTGAATACAACCTCTCCGAAGAGGTTAGGCAAGCTGGTTATGAAATTGAACCAGATGAA
CTAGCATCTATTGTTCGAGCTCATGATATCAAGGGGCTGGAATTCAATGGTGGAGCTGAA
GGATTAGCAGGAAAAGTGTGTGTCTCACTGGATACCGGTGTCAAAACAAGCGAAGTGCAT
TCTAGACAAAGTATCTATGGCCTCAACCAATATGTTGAAAAGCCTTCTGGAACTTTCTGG
ATGTTTATCTGGGAAGCCCTGCAAGACCTTACTCTAATAATCCTCATGGTATGTGCCGCG
GTTTCTATAGGTGTTGGGATCGCCACAGAGGGATGGCCAAAAGGTATGTACGATGGGTTA
GGAATAGTACTCAGTATTTTCTTAGTAGTGATGGTTACTGCAACTAGTGACTACAAGCAG
TCCTTGCAATTCAAGGACTTGGACAAGGAGAAGAAAAATATAATTGTTCAGGTGACCAGA
GATGGATACAGACAAAAGATTTCTATATATGATTTGGTGGTTGGAGACATTGTTCATCTA
TCCATTGGAGATCAGGTTCCAGCTGATGGGGTCTTCATATCAGGTCACAGTTTATCAATT
GATGAATCAAGCTTGTCAGGTGAGAGTGAGCCGGTGAATATCAACAAACAGAGGCCATTT
CTCCTATCTGGAACCAAGGTACAAGATGGGTCTGGGAAAATGCTGGTCACATCAGTCGGT
ATGAGGACTGAATGGGGAAGATTGATGGTTACTCTGAGTGAAGGGGGAGAAGATGAGACA
CCACTGCAGGTGAAGCTTAATGGAGTGGCGACCATTATTGGGAAGATTGGTCTGGCTTTT
GCTGTGCTGACATTTTTGGTGCTGATGGGACGGTTTCTGCTCCAGAAGGCACTTCACAGC
AACATCACAGACTGGTCTTTCAGCGATGCAGTGACAATTTTGAATTATTTTGCTATTGCA
GTTACTATAATTGTGGTTGCAGTCCCAGAAGGGCTTCCATTGGCAGTGACATTGAGCCTT
GCTTTTGCAATGAAGAAATTGATGAATGCTAAGGCACTCGTGCGGCATTTATCTGCTTGT
GAAACAATGGGATCTGCCAGTTGCATTTGCACGGATAAAACAGGTACGCTGACTACAAAT
CATATGGTGGTGAATAAAATATGGATCTGTGAAAAGTCTAAAGCGATAGAAACTAACGAC
AGTAAAGATGTATTTCAGTCTTTAATCCCTGAAAAAGTATATAGCATCCTTTTGCAGTCT
ATATTTCAGAACACTGGATCTGAGGTTGTCAAAGGGAAAGATGGAAAGGTTAGCGTTTTG
GGTACTCCAACAGAAACAGCTATATTAGAGTTTGGCTTGCATTTAGGTGGTGAGAGTGCC
CACTACAAGGAGTCTGAGATAGTGAAGGTTGAGCCTTTCAATTCAGTCAAGAAAAAGATG
TCCGTGCTCGTAAGTCTTCCTGCTGGTGGGTTCCGAGCATTCTGCAAAGGCGCATCAGAA
ATTGTTTTAGAGATGTGCGACAAGATTATTAATACCAATGGAGAATTTGTGTCCCTGTCT
GCAGACCAGAGAAAGAACATCACAGATGTCATAAATGGTTTTGCCTGCGAAGCCCTTAGA
ACTCTATGCTTGGCTTTCAAGGATATAGAAAACAGTTCTAAGGACGATGATATTCCTTAT
AGTAACTATACACTAATAGCAGTTCTTGGAATCAAGGATCCAGTTCGCCCTGGAGTGAAG
GATGCTGTTCGGACTTGTTTAGCTGCTGGGATTACAGTGCGGATGGTCACAGGCGACAAT
ATCAATACAGCAAAAGCCATAGCTAAAGAATGTGGCATATTGACTGATGATGGTCTGGCA
ATAGAAGGGCCAGATTTTCGTAATAAGAGCCCCCAGGAGATGAAGGAGTTGATACCAAAA
CTTCAGGTGATGGCTCGATCATTGCCTTTGGACAAGCACACCTTGGTAAGCCAGCTAAGA
AATTCATTTAAAGAAGTTGTGGCAGTGACTGGCGATGGGACCAACGATGCTCCTGCTTTG
CATGAGGCGGACATTGGACTTGCCATGGGCATAGCAGGAACTGAGGTGGCAAAAGAAAAT
GCGGATGTGATTATAATGGATGATAACTTCTCGACTATAGTGAATGTTGCCAGATGGGGC
CGGTCAGTCTACATAAATATTCAAAAATTTGTGCAGTTCCAGTTAACAGTCAACATTGTT
GCTCTCATGATCAACTTTGTTTCTGCATGCATCTCAGGATCTGCTCCTCTTACTGCTGTC
CAGTTGCTCTGGGTGAATATGATCATGGACACTCTTGGTGCATTAGCCTTGGCTACAGAG
GCTCCAACTGATGGCCTGATGAAACGAGCTCCAGTTGGTAGGAATGCAAATTTCATCACC
CGAACCATGTGGAGAAATATCATAGGCCAAAGCATCTATCAACTAGCCGTCCTTTTGGTC
TTCACCTTCCAAGGGAAACGGCTTCTAAAGCTCACTGGTTCAGACGCCAGTAAAATTCTT
AACACATTCATATTCAATGCCTTCGTCTTTTGCCAGGTATTCAATGAAATAAACAGCCGT
GATATGGAGAAGATAAATGTTTTCCAAGACATGTTCAGCAACTGGATATTCATAATCATA
GTCGTCTCCTCAGTTACTTTCCAGGCCATAATGGTAGAATTTTTGGGCACTTTCGCCGGA
ACAGTGCCACTGAGCTGGGAGTTGTGGCTATTAAGCATCTTAATCGGGGCTGTGAGCTTA
ATCATCGCAGTTATCCTAAAGTGCATTCCCGTCGAACCAACAAAGTACACAGCCATTGCC
AAGCATCACGATGGCTATGAACCACTCCCAAGTGGTCCGGACCGGGCATGA

Peptide Sequence

PEP ID

VIT_13s0158g00360.t01
PEP Infomation

pep chromosome:12X:13:21214703:21233743:-1 gene:VIT_13s0158g00360 transcript:VIT_13s0158g00360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HHY6]
Sequence

MEKYLRENFDVEPKRASEEARRRWRSAVSVVKNPRRRFRMVADLAKRSETERKRQKIQEK
IRVALYVQKAALHFIEAGHRIEYNLSEEVRQAGYEIEPDELASIVRAHDIKGLEFNGGAE
GLAGKVCVSLDTGVKTSEVHSRQSIYGLNQYVEKPSGTFWMFIWEALQDLTLIILMVCAA
VSIGVGIATEGWPKGMYDGLGIVLSIFLVVMVTATSDYKQSLQFKDLDKEKKNIIVQVTR
DGYRQKISIYDLVVGDIVHLSIGDQVPADGVFISGHSLSIDESSLSGESEPVNINKQRPF
LLSGTKVQDGSGKMLVTSVGMRTEWGRLMVTLSEGGEDETPLQVKLNGVATIIGKIGLAF
AVLTFLVLMGRFLLQKALHSNITDWSFSDAVTILNYFAIAVTIIVVAVPEGLPLAVTLSL
AFAMKKLMNAKALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKIWICEKSKAIETND
SKDVFQSLIPEKVYSILLQSIFQNTGSEVVKGKDGKVSVLGTPTETAILEFGLHLGGESA
HYKESEIVKVEPFNSVKKKMSVLVSLPAGGFRAFCKGASEIVLEMCDKIINTNGEFVSLS
ADQRKNITDVINGFACEALRTLCLAFKDIENSSKDDDIPYSNYTLIAVLGIKDPVRPGVK
DAVRTCLAAGITVRMVTGDNINTAKAIAKECGILTDDGLAIEGPDFRNKSPQEMKELIPK
LQVMARSLPLDKHTLVSQLRNSFKEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKEN
ADVIIMDDNFSTIVNVARWGRSVYINIQKFVQFQLTVNIVALMINFVSACISGSAPLTAV
QLLWVNMIMDTLGALALATEAPTDGLMKRAPVGRNANFITRTMWRNIIGQSIYQLAVLLV
FTFQGKRLLKLTGSDASKILNTFIFNAFVFCQVFNEINSRDMEKINVFQDMFSNWIFIII
VVSSVTFQAIMVEFLGTFAGTVPLSWELWLLSILIGAVSLIIAVILKCIPVEPTKYTAIA
KHHDGYEPLPSGPDRA

Transcript Sequence

Transcript ID

VIT_13s0158g00360.t01
Transcript Infomation

cdna chromosome:12X:13:21214703:21233743:-1 gene:VIT_13s0158g00360 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HHY6]
Sequence

AAGTTTCTCTAACCTTTCCCGCCTTTTTCGGCCAACTGTGAGACTTTCCGTCTAAAGAAA
CTATAACTGGATCCGAAAACGAAACCCTATCTCTAGTTCTAGCTTTCGAATTGATAGAGA
TTAGCTCCGTTTTCGGACAGAAATCAATGGAGAAGTATTTGAGGGAGAATTTTGACGTTG
AGCCGAAGCGAGCTTCGGAGGAAGCTCGGAGACGATGGAGATCGGCCGTGTCTGTCGTCA
AGAATCCCCGGAGACGGTTCCGGATGGTTGCCGATCTCGCTAAGCGATCCGAAACGGAAA
GAAAGCGCCAGAAAATTCAGGAAAAGATTCGAGTAGCTTTATACGTGCAAAAGGCAGCAT
TGCATTTCATTGAGGCGGGTCATCGTATTGAATACAACCTCTCCGAAGAGGTTAGGCAAG
CTGGTTATGAAATTGAACCAGATGAACTAGCATCTATTGTTCGAGCTCATGATATCAAGG
GGCTGGAATTCAATGGTGGAGCTGAAGGATTAGCAGGAAAAGTGTGTGTCTCACTGGATA
CCGGTGTCAAAACAAGCGAAGTGCATTCTAGACAAAGTATCTATGGCCTCAACCAATATG
TTGAAAAGCCTTCTGGAACTTTCTGGATGTTTATCTGGGAAGCCCTGCAAGACCTTACTC
TAATAATCCTCATGGTATGTGCCGCGGTTTCTATAGGTGTTGGGATCGCCACAGAGGGAT
GGCCAAAAGGTATGTACGATGGGTTAGGAATAGTACTCAGTATTTTCTTAGTAGTGATGG
TTACTGCAACTAGTGACTACAAGCAGTCCTTGCAATTCAAGGACTTGGACAAGGAGAAGA
AAAATATAATTGTTCAGGTGACCAGAGATGGATACAGACAAAAGATTTCTATATATGATT
TGGTGGTTGGAGACATTGTTCATCTATCCATTGGAGATCAGGTTCCAGCTGATGGGGTCT
TCATATCAGGTCACAGTTTATCAATTGATGAATCAAGCTTGTCAGGTGAGAGTGAGCCGG
TGAATATCAACAAACAGAGGCCATTTCTCCTATCTGGAACCAAGGTACAAGATGGGTCTG
GGAAAATGCTGGTCACATCAGTCGGTATGAGGACTGAATGGGGAAGATTGATGGTTACTC
TGAGTGAAGGGGGAGAAGATGAGACACCACTGCAGGTGAAGCTTAATGGAGTGGCGACCA
TTATTGGGAAGATTGGTCTGGCTTTTGCTGTGCTGACATTTTTGGTGCTGATGGGACGGT
TTCTGCTCCAGAAGGCACTTCACAGCAACATCACAGACTGGTCTTTCAGCGATGCAGTGA
CAATTTTGAATTATTTTGCTATTGCAGTTACTATAATTGTGGTTGCAGTCCCAGAAGGGC
TTCCATTGGCAGTGACATTGAGCCTTGCTTTTGCAATGAAGAAATTGATGAATGCTAAGG
CACTCGTGCGGCATTTATCTGCTTGTGAAACAATGGGATCTGCCAGTTGCATTTGCACGG
ATAAAACAGGTACGCTGACTACAAATCATATGGTGGTGAATAAAATATGGATCTGTGAAA
AGTCTAAAGCGATAGAAACTAACGACAGTAAAGATGTATTTCAGTCTTTAATCCCTGAAA
AAGTATATAGCATCCTTTTGCAGTCTATATTTCAGAACACTGGATCTGAGGTTGTCAAAG
GGAAAGATGGAAAGGTTAGCGTTTTGGGTACTCCAACAGAAACAGCTATATTAGAGTTTG
GCTTGCATTTAGGTGGTGAGAGTGCCCACTACAAGGAGTCTGAGATAGTGAAGGTTGAGC
CTTTCAATTCAGTCAAGAAAAAGATGTCCGTGCTCGTAAGTCTTCCTGCTGGTGGGTTCC
GAGCATTCTGCAAAGGCGCATCAGAAATTGTTTTAGAGATGTGCGACAAGATTATTAATA
CCAATGGAGAATTTGTGTCCCTGTCTGCAGACCAGAGAAAGAACATCACAGATGTCATAA
ATGGTTTTGCCTGCGAAGCCCTTAGAACTCTATGCTTGGCTTTCAAGGATATAGAAAACA
GTTCTAAGGACGATGATATTCCTTATAGTAACTATACACTAATAGCAGTTCTTGGAATCA
AGGATCCAGTTCGCCCTGGAGTGAAGGATGCTGTTCGGACTTGTTTAGCTGCTGGGATTA
CAGTGCGGATGGTCACAGGCGACAATATCAATACAGCAAAAGCCATAGCTAAAGAATGTG
GCATATTGACTGATGATGGTCTGGCAATAGAAGGGCCAGATTTTCGTAATAAGAGCCCCC
AGGAGATGAAGGAGTTGATACCAAAACTTCAGGTGATGGCTCGATCATTGCCTTTGGACA
AGCACACCTTGGTAAGCCAGCTAAGAAATTCATTTAAAGAAGTTGTGGCAGTGACTGGCG
ATGGGACCAACGATGCTCCTGCTTTGCATGAGGCGGACATTGGACTTGCCATGGGCATAG
CAGGAACTGAGGTGGCAAAAGAAAATGCGGATGTGATTATAATGGATGATAACTTCTCGA
CTATAGTGAATGTTGCCAGATGGGGCCGGTCAGTCTACATAAATATTCAAAAATTTGTGC
AGTTCCAGTTAACAGTCAACATTGTTGCTCTCATGATCAACTTTGTTTCTGCATGCATCT
CAGGATCTGCTCCTCTTACTGCTGTCCAGTTGCTCTGGGTGAATATGATCATGGACACTC
TTGGTGCATTAGCCTTGGCTACAGAGGCTCCAACTGATGGCCTGATGAAACGAGCTCCAG
TTGGTAGGAATGCAAATTTCATCACCCGAACCATGTGGAGAAATATCATAGGCCAAAGCA
TCTATCAACTAGCCGTCCTTTTGGTCTTCACCTTCCAAGGGAAACGGCTTCTAAAGCTCA
CTGGTTCAGACGCCAGTAAAATTCTTAACACATTCATATTCAATGCCTTCGTCTTTTGCC
AGGTATTCAATGAAATAAACAGCCGTGATATGGAGAAGATAAATGTTTTCCAAGACATGT
TCAGCAACTGGATATTCATAATCATAGTCGTCTCCTCAGTTACTTTCCAGGCCATAATGG
TAGAATTTTTGGGCACTTTCGCCGGAACAGTGCCACTGAGCTGGGAGTTGTGGCTATTAA
GCATCTTAATCGGGGCTGTGAGCTTAATCATCGCAGTTATCCTAAAGTGCATTCCCGTCG
AACCAACAAAGTACACAGCCATTGCCAAGCATCACGATGGCTATGAACCACTCCCAAGTG
GTCCGGACCGGGCATGAAGGAAAGAGATGATCATTTCCAAGGACCTGATTGCAGACCTCA
ATGGCAGCCTCAAGCGATACCAATTCAAGCTTTTGAGAATCGGAGTATATGCTAGTCCCT
TATTCAGACGATGGTACAGTTGCATACTCTTTCCATCATATATCCTCCCGCTGTTTGCAT
GAACTCCAGGTAAGTTGTTGTTGTTCATTTTCCAAGGATTTGTTTTTATATCCCTTGGTT
GTGCATTCATTCATAGAATTCGGCTGGACTTTTAAGTTTGGAGTGGGAATTTTCATCAAA
TGGGACCAGTGGCACTGGTACCTCCAGTCACCTGAAAAAGAGTGAATTATTCTTTCTTCT
ACTCGTCGGTGTATCTTCTTTTTCCATTATATTCTATAACCATTGTAGTCTTGTAATGAA
CTGAAAACCCTACATTGTTGCAGTATGTATGCATTGAGTTTTCCAGCCTATTAAA