Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0156g00590.t01
CDS Infomation

cds chromosome:12X:13:24256825:24259251:-1 gene:VIT_13s0156g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTTTCCTATGCTTCAACATGCCGTGCTCTTGTTACTCTTTGTTTTCCCATCTTGG
CCTTTGGTATTTTCTCAAGCTAATCCTGAAATTCGTTTGGGTTCATCCCTTATTGCCTCT
GATAACTCTTCCTCATGGAGATCGCCTTCTGGTGAATTTGCCTTAGGATTTCACCAACTT
GGCAATCAAAGCCTTTTCTTGCTTGCCATTTGGTTTGAAAAAATACCAGAAAAAACCTTA
GTTTGGTATGCAAATGGAGATAACCCGGCTCCAAAAGGGTCCAAAGTTGAACTTACCTCA
GATGGCCAGTTCATGCTAAGGGACCCAAAAGGCGAAGAGATCTGGAGACCCCAGAAAGCT
GATAATATTGTCTCTCATGCTACCATGCTTGATACTGGTAACTTCGTTCTTGAAGATAGG
AATCAGAATCTTACTGTATGGGAGAGCTTCAAGAATCCAGTCAACACCATCCTGCCAACT
CAAGTGCTGGAACTTGGTGGCACCCTTTATTCTCAGAAATCAGAAAGCAACTACTCAAAG
GGGAGGTTCCAGCTCCGTTTGCAACCTGGTGGCAGTCTTGAACTTATTACCGTGGACCCA
GAATCGGGTACTGCATACGAGGCTTATTACCGGAGCAACAGTATCTTTGTTGCTCCAAAT
AGCGGCGATTCTGTTGAACGGATGATTTTTGATGAATCGGGTCGCATCTATGTTCTTCTA
AGGAATGGAACAGGTACTGTTAACATCGCGTCTGGAAGTACATCTTCCAGTGGGGGTCAC
TACTACAGGGCAACACTCGATCACGATGGAGTTTTCAGGCTATATAACCGCGACAAGAAG
GTGGGCAGCCACAATACTTCCTCTTGGTCGGTAATGAAAAACACTCCTTATGATATTTGT
GATGCAACCCCAAGTTCTCTTGGCAGTGGTATTTGTGGATTCAACAGCTATTGTATTGTT
GATGAAGAAGGGCTCCCTCAGTGTTTGTGCCCAGATGAATACTCTCACTTAGATCCTTCG
GACAGAAAACAAGGGTGCAAGCCGAATTTTGAATTGCCCAGCTGCCAAAAAGATGGATGG
GAAGGAAATAAGGATGCAGTAGAGTTCAGAGAATTAGCAGCGACTAACTGGCCATTATCG
GATTATCAACTTCAGAGGGGACCTGACTTTGACAAGGAGAAGTGTAAACAGTCTTGCAAA
GATGATTGCCTCTGTGCGGTTGCTATTCACGGCGGAGATATGTGTTGGAAGAAGAAGTTA
CCTCTTTCAAATGGAAGACACAGCAAAATTGCTTTTAAATATACTACCGCTCTCATCAAG
GTACCCAAAAATAATGCTACACCAAGATGCCGAGATAAGTCGACCCTGACCCTTGTTGGG
TCAGTAATCTTTGGCAGCTCTGCCTTCTTTAATCTCTTTTTACTGTCAGCTATTCTTGGA
GTTGCTGTCTTCTGCCATCAGAAGAAACCGACAAAACTGAAGTCAGTTTCAAGCAGATTT
GCGACAACCATTGTGAGAACTTATTCATACAGAGAGCTTGAAGTGGCGACTCATGGCTTC
AAAGAGAAACTAGGCAGAGGGGCTTTTGGAACAGTTTATAAAGGAGTGTTGGCATCAGAT
CCGGGGGGAGCCGTTGCGGTGAAGAAGTTAGATAAGGTGATTCAAGAAGGCGAGAAGGAA
TTCGAAACAGAAGTAGCTGCAATCGGCCAGACCCACCATAGGAATTTAGTTGGTTTGCTC
GGCTACTGCAATGAGGGAGAGCACCGGCTTCTGGTATACGAATTCATGAGCAATGGATCT
TTAGCCAATTTGCTGTTTGGAATATCCAGGCCTGAGTGGAGCCAAAGAGTTCAGATTGCC
TCTGGGATTGCGAGAGGGCTAATGTACTTACACGAAGAGTGCCGCACCCAGATCATCCAT
TGTGATATAAAGCCTCAAAACATACTCCTGGACGACCACTTCACGCCTAGGATTTCAGAC
TTTGGACTAGCAAAGCTTTTGTTGGCTGATCAGACTCGAATTACTCGAACAGGCATAAGA
GGGACCATAGGGTACTTTGCGCCGGAATGGTTCAGGAAAGGATCAATCACAGCTAAAGTT
GATGTTTACAGTTATGGTGGTATGTTACTGGAGATGATATGTTGCAAGTCCAGTGTTGTA
TTTGGGGATAACGAAGAAGAAGAGGCGCTAACGGATTGGGCTTACGAATGCTACATGGGA
GGGAAATTGGAGGAGATGGTGGAAGATGATGAGGAAGCAAGGAAGGATATGAAAAGGGTG
GAGACGATGGTGAAGGTTGCATTTTGGTGCATCCAAGAGGATCCAGGGCGAAGGCCTACA
ATGAGGAAGGTTTCACAAATGCTAGATGGTGTAGTTGAAGTTCCTGTGCCCCCTCGCCCC
TTTGGAGTTTTCATGAGCTTATCTTGA

Peptide Sequence

PEP ID

VIT_13s0156g00590.t01
PEP Infomation

pep chromosome:12X:13:24256825:24259251:-1 gene:VIT_13s0156g00590 transcript:VIT_13s0156g00590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAFPMLQHAVLLLLFVFPSWPLVFSQANPEIRLGSSLIASDNSSSWRSPSGEFALGFHQL
GNQSLFLLAIWFEKIPEKTLVWYANGDNPAPKGSKVELTSDGQFMLRDPKGEEIWRPQKA
DNIVSHATMLDTGNFVLEDRNQNLTVWESFKNPVNTILPTQVLELGGTLYSQKSESNYSK
GRFQLRLQPGGSLELITVDPESGTAYEAYYRSNSIFVAPNSGDSVERMIFDESGRIYVLL
RNGTGTVNIASGSTSSSGGHYYRATLDHDGVFRLYNRDKKVGSHNTSSWSVMKNTPYDIC
DATPSSLGSGICGFNSYCIVDEEGLPQCLCPDEYSHLDPSDRKQGCKPNFELPSCQKDGW
EGNKDAVEFRELAATNWPLSDYQLQRGPDFDKEKCKQSCKDDCLCAVAIHGGDMCWKKKL
PLSNGRHSKIAFKYTTALIKVPKNNATPRCRDKSTLTLVGSVIFGSSAFFNLFLLSAILG
VAVFCHQKKPTKLKSVSSRFATTIVRTYSYRELEVATHGFKEKLGRGAFGTVYKGVLASD
PGGAVAVKKLDKVIQEGEKEFETEVAAIGQTHHRNLVGLLGYCNEGEHRLLVYEFMSNGS
LANLLFGISRPEWSQRVQIASGIARGLMYLHEECRTQIIHCDIKPQNILLDDHFTPRISD
FGLAKLLLADQTRITRTGIRGTIGYFAPEWFRKGSITAKVDVYSYGGMLLEMICCKSSVV
FGDNEEEEALTDWAYECYMGGKLEEMVEDDEEARKDMKRVETMVKVAFWCIQEDPGRRPT
MRKVSQMLDGVVEVPVPPRPFGVFMSLS

Transcript Sequence

Transcript ID

VIT_13s0156g00590.t01
Transcript Infomation

cdna chromosome:12X:13:24256825:24259251:-1 gene:VIT_13s0156g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTTTCCTATGCTTCAACATGCCGTGCTCTTGTTACTCTTTGTTTTCCCATCTTGG
CCTTTGGTATTTTCTCAAGCTAATCCTGAAATTCGTTTGGGTTCATCCCTTATTGCCTCT
GATAACTCTTCCTCATGGAGATCGCCTTCTGGTGAATTTGCCTTAGGATTTCACCAACTT
GGCAATCAAAGCCTTTTCTTGCTTGCCATTTGGTTTGAAAAAATACCAGAAAAAACCTTA
GTTTGGTATGCAAATGGAGATAACCCGGCTCCAAAAGGGTCCAAAGTTGAACTTACCTCA
GATGGCCAGTTCATGCTAAGGGACCCAAAAGGCGAAGAGATCTGGAGACCCCAGAAAGCT
GATAATATTGTCTCTCATGCTACCATGCTTGATACTGGTAACTTCGTTCTTGAAGATAGG
AATCAGAATCTTACTGTATGGGAGAGCTTCAAGAATCCAGTCAACACCATCCTGCCAACT
CAAGTGCTGGAACTTGGTGGCACCCTTTATTCTCAGAAATCAGAAAGCAACTACTCAAAG
GGGAGGTTCCAGCTCCGTTTGCAACCTGGTGGCAGTCTTGAACTTATTACCGTGGACCCA
GAATCGGGTACTGCATACGAGGCTTATTACCGGAGCAACAGTATCTTTGTTGCTCCAAAT
AGCGGCGATTCTGTTGAACGGATGATTTTTGATGAATCGGGTCGCATCTATGTTCTTCTA
AGGAATGGAACAGGTACTGTTAACATCGCGTCTGGAAGTACATCTTCCAGTGGGGGTCAC
TACTACAGGGCAACACTCGATCACGATGGAGTTTTCAGGCTATATAACCGCGACAAGAAG
GTGGGCAGCCACAATACTTCCTCTTGGTCGGTAATGAAAAACACTCCTTATGATATTTGT
GATGCAACCCCAAGTTCTCTTGGCAGTGGTATTTGTGGATTCAACAGCTATTGTATTGTT
GATGAAGAAGGGCTCCCTCAGTGTTTGTGCCCAGATGAATACTCTCACTTAGATCCTTCG
GACAGAAAACAAGGGTGCAAGCCGAATTTTGAATTGCCCAGCTGCCAAAAAGATGGATGG
GAAGGAAATAAGGATGCAGTAGAGTTCAGAGAATTAGCAGCGACTAACTGGCCATTATCG
GATTATCAACTTCAGAGGGGACCTGACTTTGACAAGGAGAAGTGTAAACAGTCTTGCAAA
GATGATTGCCTCTGTGCGGTTGCTATTCACGGCGGAGATATGTGTTGGAAGAAGAAGTTA
CCTCTTTCAAATGGAAGACACAGCAAAATTGCTTTTAAATATACTACCGCTCTCATCAAG
GTACCCAAAAATAATGCTACACCAAGATGCCGAGATAAGTCGACCCTGACCCTTGTTGGG
TCAGTAATCTTTGGCAGCTCTGCCTTCTTTAATCTCTTTTTACTGTCAGCTATTCTTGGA
GTTGCTGTCTTCTGCCATCAGAAGAAACCGACAAAACTGAAGTCAGTTTCAAGCAGATTT
GCGACAACCATTGTGAGAACTTATTCATACAGAGAGCTTGAAGTGGCGACTCATGGCTTC
AAAGAGAAACTAGGCAGAGGGGCTTTTGGAACAGTTTATAAAGGAGTGTTGGCATCAGAT
CCGGGGGGAGCCGTTGCGGTGAAGAAGTTAGATAAGGTGATTCAAGAAGGCGAGAAGGAA
TTCGAAACAGAAGTAGCTGCAATCGGCCAGACCCACCATAGGAATTTAGTTGGTTTGCTC
GGCTACTGCAATGAGGGAGAGCACCGGCTTCTGGTATACGAATTCATGAGCAATGGATCT
TTAGCCAATTTGCTGTTTGGAATATCCAGGCCTGAGTGGAGCCAAAGAGTTCAGATTGCC
TCTGGGATTGCGAGAGGGCTAATGTACTTACACGAAGAGTGCCGCACCCAGATCATCCAT
TGTGATATAAAGCCTCAAAACATACTCCTGGACGACCACTTCACGCCTAGGATTTCAGAC
TTTGGACTAGCAAAGCTTTTGTTGGCTGATCAGACTCGAATTACTCGAACAGGCATAAGA
GGGACCATAGGGTACTTTGCGCCGGAATGGTTCAGGAAAGGATCAATCACAGCTAAAGTT
GATGTTTACAGTTATGGTGGTATGTTACTGGAGATGATATGTTGCAAGTCCAGTGTTGTA
TTTGGGGATAACGAAGAAGAAGAGGCGCTAACGGATTGGGCTTACGAATGCTACATGGGA
GGGAAATTGGAGGAGATGGTGGAAGATGATGAGGAAGCAAGGAAGGATATGAAAAGGGTG
GAGACGATGGTGAAGGTTGCATTTTGGTGCATCCAAGAGGATCCAGGGCGAAGGCCTACA
ATGAGGAAGGTTTCACAAATGCTAGATGGTGTAGTTGAAGTTCCTGTGCCCCCTCGCCCC
TTTGGAGTTTTCATGAGCTTATCTTGA