Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0156g00580.t01
CDS Infomation

cds chromosome:12X:13:24251928:24254388:-1 gene:VIT_13s0156g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCCAGGTTCTTGCTTCTTCTTGTCCTTCCGTCTTTAGTTTTTTCTCAATATTGC
ACTGATCTTGATATTACCGCCTCCAACAACTCGCCTAGATGTGTATCACCTTCTGGTGAA
TTTGCGTTTGGGTTTTACCGCCTTGGCAGTCAAAGTCTCTTCTTGCTTGCTATCTGGTTC
GAAAAAATACCAGAAAAAACCTTAGTTTGGTATGCAAATGGAGATAACCCGGCTCCTAAA
GGATCCAAACTTGAACTTACCTCTGATGGCCAGTTCATACTAAGTGATCCACAAGGCAAA
GAGATATGGAGACCTCAGAACTCTGTTACCGCGGTCACTCATGCTGCCATGCTTGATACT
GGTAACTTTGTTCTTGAAAATAGGAATCAAAATCTTACAGTGTGGCAGAGCTTCCAGAAT
CCAGCCAACACCATCTTGCCAACTCAAACACTGGAAATCGGTGGCACCATGTATTCTCAG
CAGTCAAACAGCAGCTACTCAAAGGGGAGGTTCCAGCTTCAAATGGAAGCTGGAGGCAAT
CTCGTACTTAATACCTTGGACCCAGAATCTGGTAAAGCATATGATGTTTATTATTCAAGC
AACACCAATGATGCTGCAAATAGCGGCAATTCTGGCCAACGGGTGATTTTTGATGAGTCA
GGTAGCATCTATGTTCTTCTAAGGAATGGAGGTACTGTTAACATCGCCTCCGGAAGTAGC
TTGACGGGAGATTACTATTACCGGGCAACGCTTGACCAGGATGGAGTTTTCAGGCTATAT
AATCGTGACAACAGCAGTACTTCTTGGTCTGTTGTGAAAAACATTCCTGATAACATTTGT
ACCGTGACCCCAAGTAATCTTGGCAGTGGAATTTGTGGGTTCAACAGCTATTGTTCCATT
GATGGAAGGGGGCTGCCTGATTGTCTATGCCCAGATGGGTACTCTCATTTGGATCCTCTT
GACAGAAAACAAGGCTGTAAACCGAATTTTGAATTGCCCAGCTGCCAAACAGCTGTTGAT
GGATGGGAAGCAAACAAGGATGCAGTAGAGTTCAGAGAATTAAAAGATGTCAACTGGCCA
TTATCTGATTATCAACTTCAGGAGGGACCTGAATTCAACAAGGAGAAGTGTAAACAGTCT
TGCAAAGATGATTGCCTCTGTGTGGTTGCTATCTATAACACTGACAATCAGTGTTGGAAG
AAGAAGTTTCCTGTCTCAAATGGAAGACACGAACCAACACAAAATGTGCTCCAATACACT
ACTGCTCTCATCAAGGTACGGATTAAAAATGATACTATAGAGAGATGCCCAGACAAGTCT
ACCTTGATCCTTGTTGGGTCAGTACTCCTTGGCAGCTCTGTGTTGTTTAATCTCTTTTTG
TTGTTAGCAATTCCTGCGGCTGCTCTCTTCTTCTACAACAAGAAACTGATGAATCTCCGG
TCCGTTTCAAGCATATTCGCGACCACCAGTGTGAGAACTTATTCATACAAAGAACTTGAC
GAGGCAACCTGTGGATTCAAGGAGAAATTGGGCAGGGGAGCTTTTGGAACAGTATATAAA
GGGGTTTTGGCATCAGATGCTGGGAGATTTGTGGCAGTCAAGAAGTTAGATAAGGTGGTA
CAGGAAGGTGAGAAGGAATTCAAAACAGAAGTCACTGTGATTGGGCGGACCCACCATAGG
AATTTAGTCAGTTTGCTTGGATACTGTGATCAGGGGGTGCACCGGCTTCTGGTATACGAG
TACATGAACAATGGATCTTTAGCAGACTTGTTGTTTGGAATATCTACACCTGACTGGAGC
CAAAGACTACAGATTGCCTTTGGGATTGCAAAAGGGCTAATGTATTTACATGAAGAGTGC
AGCACCCCCATCATCCATTGTGATATAAAGCCTGAAAACATCCTCCTTGACGAGTACCTT
ACACCTAGGATTTCAGACTTCGGACTAGCAAAGCTTCTGATGAGAGATCAAACTCGGGCC
CTTACAACCATCAGAGGGACCAAAGGATACGTTGCACCAGAATGGTTCAGGAGCAAGCCG
ATTACGGTGAAAGTGGATGTTTATAGTTATGGGGTTATGTTACTGGAGATCATCAGTTGC
AGGAAGAGCGTACATTCACAGCCAGAAAATGACGAGGAAGCAATACTTACTGATTGGGCT
TATGATTGCTATAGAGGGCACAGATTGGATAAGCTAGTGAAGAATGATGATGAAGTAAGA
AAGTACATGGGGATGCTGGAGAGGGTAGTGATGGTTGCCATTTGGTGCATTCAAGAGGAC
CCTTCTTTGAGGCCCTCCATGGGAATGGTCATACTGATGCTTGAAGGAGTTGTTGAAGTT
CCTGTGCCCCCTTGTCCTTTCCCCTTTAGTTCAACCTTCTGA

Peptide Sequence

PEP ID

VIT_13s0156g00580.t01
PEP Infomation

pep chromosome:12X:13:24251928:24254388:-1 gene:VIT_13s0156g00580 transcript:VIT_13s0156g00580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAARFLLLLVLPSLVFSQYCTDLDITASNNSPRCVSPSGEFAFGFYRLGSQSLFLLAIWF
EKIPEKTLVWYANGDNPAPKGSKLELTSDGQFILSDPQGKEIWRPQNSVTAVTHAAMLDT
GNFVLENRNQNLTVWQSFQNPANTILPTQTLEIGGTMYSQQSNSSYSKGRFQLQMEAGGN
LVLNTLDPESGKAYDVYYSSNTNDAANSGNSGQRVIFDESGSIYVLLRNGGTVNIASGSS
LTGDYYYRATLDQDGVFRLYNRDNSSTSWSVVKNIPDNICTVTPSNLGSGICGFNSYCSI
DGRGLPDCLCPDGYSHLDPLDRKQGCKPNFELPSCQTAVDGWEANKDAVEFRELKDVNWP
LSDYQLQEGPEFNKEKCKQSCKDDCLCVVAIYNTDNQCWKKKFPVSNGRHEPTQNVLQYT
TALIKVRIKNDTIERCPDKSTLILVGSVLLGSSVLFNLFLLLAIPAAALFFYNKKLMNLR
SVSSIFATTSVRTYSYKELDEATCGFKEKLGRGAFGTVYKGVLASDAGRFVAVKKLDKVV
QEGEKEFKTEVTVIGRTHHRNLVSLLGYCDQGVHRLLVYEYMNNGSLADLLFGISTPDWS
QRLQIAFGIAKGLMYLHEECSTPIIHCDIKPENILLDEYLTPRISDFGLAKLLMRDQTRA
LTTIRGTKGYVAPEWFRSKPITVKVDVYSYGVMLLEIISCRKSVHSQPENDEEAILTDWA
YDCYRGHRLDKLVKNDDEVRKYMGMLERVVMVAIWCIQEDPSLRPSMGMVILMLEGVVEV
PVPPCPFPFSSTF

Transcript Sequence

Transcript ID

VIT_13s0156g00580.t01
Transcript Infomation

cdna chromosome:12X:13:24251928:24254388:-1 gene:VIT_13s0156g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCACAATCCCTTGTGAATACTGTTATATGTTCTACAAACTTTCTCCGGTGTGAAGGGTA
GTACCAAGGCTCTTCTGCAATGGCTGCCAGGTTCTTGCTTCTTCTTGTCCTTCCGTCTTT
AGTTTTTTCTCAATATTGCACTGATCTTGATATTACCGCCTCCAACAACTCGCCTAGATG
TGTATCACCTTCTGGTGAATTTGCGTTTGGGTTTTACCGCCTTGGCAGTCAAAGTCTCTT
CTTGCTTGCTATCTGGTTCGAAAAAATACCAGAAAAAACCTTAGTTTGGTATGCAAATGG
AGATAACCCGGCTCCTAAAGGATCCAAACTTGAACTTACCTCTGATGGCCAGTTCATACT
AAGTGATCCACAAGGCAAAGAGATATGGAGACCTCAGAACTCTGTTACCGCGGTCACTCA
TGCTGCCATGCTTGATACTGGTAACTTTGTTCTTGAAAATAGGAATCAAAATCTTACAGT
GTGGCAGAGCTTCCAGAATCCAGCCAACACCATCTTGCCAACTCAAACACTGGAAATCGG
TGGCACCATGTATTCTCAGCAGTCAAACAGCAGCTACTCAAAGGGGAGGTTCCAGCTTCA
AATGGAAGCTGGAGGCAATCTCGTACTTAATACCTTGGACCCAGAATCTGGTAAAGCATA
TGATGTTTATTATTCAAGCAACACCAATGATGCTGCAAATAGCGGCAATTCTGGCCAACG
GGTGATTTTTGATGAGTCAGGTAGCATCTATGTTCTTCTAAGGAATGGAGGTACTGTTAA
CATCGCCTCCGGAAGTAGCTTGACGGGAGATTACTATTACCGGGCAACGCTTGACCAGGA
TGGAGTTTTCAGGCTATATAATCGTGACAACAGCAGTACTTCTTGGTCTGTTGTGAAAAA
CATTCCTGATAACATTTGTACCGTGACCCCAAGTAATCTTGGCAGTGGAATTTGTGGGTT
CAACAGCTATTGTTCCATTGATGGAAGGGGGCTGCCTGATTGTCTATGCCCAGATGGGTA
CTCTCATTTGGATCCTCTTGACAGAAAACAAGGCTGTAAACCGAATTTTGAATTGCCCAG
CTGCCAAACAGCTGTTGATGGATGGGAAGCAAACAAGGATGCAGTAGAGTTCAGAGAATT
AAAAGATGTCAACTGGCCATTATCTGATTATCAACTTCAGGAGGGACCTGAATTCAACAA
GGAGAAGTGTAAACAGTCTTGCAAAGATGATTGCCTCTGTGTGGTTGCTATCTATAACAC
TGACAATCAGTGTTGGAAGAAGAAGTTTCCTGTCTCAAATGGAAGACACGAACCAACACA
AAATGTGCTCCAATACACTACTGCTCTCATCAAGGTACGGATTAAAAATGATACTATAGA
GAGATGCCCAGACAAGTCTACCTTGATCCTTGTTGGGTCAGTACTCCTTGGCAGCTCTGT
GTTGTTTAATCTCTTTTTGTTGTTAGCAATTCCTGCGGCTGCTCTCTTCTTCTACAACAA
GAAACTGATGAATCTCCGGTCCGTTTCAAGCATATTCGCGACCACCAGTGTGAGAACTTA
TTCATACAAAGAACTTGACGAGGCAACCTGTGGATTCAAGGAGAAATTGGGCAGGGGAGC
TTTTGGAACAGTATATAAAGGGGTTTTGGCATCAGATGCTGGGAGATTTGTGGCAGTCAA
GAAGTTAGATAAGGTGGTACAGGAAGGTGAGAAGGAATTCAAAACAGAAGTCACTGTGAT
TGGGCGGACCCACCATAGGAATTTAGTCAGTTTGCTTGGATACTGTGATCAGGGGGTGCA
CCGGCTTCTGGTATACGAGTACATGAACAATGGATCTTTAGCAGACTTGTTGTTTGGAAT
ATCTACACCTGACTGGAGCCAAAGACTACAGATTGCCTTTGGGATTGCAAAAGGGCTAAT
GTATTTACATGAAGAGTGCAGCACCCCCATCATCCATTGTGATATAAAGCCTGAAAACAT
CCTCCTTGACGAGTACCTTACACCTAGGATTTCAGACTTCGGACTAGCAAAGCTTCTGAT
GAGAGATCAAACTCGGGCCCTTACAACCATCAGAGGGACCAAAGGATACGTTGCACCAGA
ATGGTTCAGGAGCAAGCCGATTACGGTGAAAGTGGATGTTTATAGTTATGGGGTTATGTT
ACTGGAGATCATCAGTTGCAGGAAGAGCGTACATTCACAGCCAGAAAATGACGAGGAAGC
AATACTTACTGATTGGGCTTATGATTGCTATAGAGGGCACAGATTGGATAAGCTAGTGAA
GAATGATGATGAAGTAAGAAAGTACATGGGGATGCTGGAGAGGGTAGTGATGGTTGCCAT
TTGGTGCATTCAAGAGGACCCTTCTTTGAGGCCCTCCATGGGAATGGTCATACTGATGCT
TGAAGGAGTTGTTGAAGTTCCTGTGCCCCCTTGTCCTTTCCCCTTTAGTTCAACCTTCTG
A