Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0156g00110.t01
CDS Infomation

cds chromosome:12X:13:23876862:23878521:1 gene:VIT_13s0156g00110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGATATTGTCACAGATGTGGTCTTTCTTAGGCCTCCTCACTGTACTCCAAAACGTC
TTGCCATCCCAAATTCTGTCACTTCTCCACTCCTTCTACGAGTCCCTTCAAGACTTCTTC
TCCCCATTCGCCTACTTCGAGATCCCTGAATTCAACGACTACTGCGGCGTCGACGTCAAT
GACCTCTACCGCCATGTCAACCTCTACCTCAACTCTGTCAACCCTGCCACCACCTGCCGC
CGCTTCACCCTCTCGCGCTCCAAATCCTCCAACCGCATCTCCTTCACCGTCGCTCCTAAT
CACACAGTCCATGACTCCTTCAATGGTCACACTCTCTCCTGGACCCACCACGTGGAGACG
GTTCAGGACTCTCTGGACGAGAGGAGAAGCTTCTCCCTCAAGCTCCCCAAGCGCCACCGC
CAGGCCCTCCTCTCGCCCTACCTCGAGCTCGTCACCTCTCGCGCTGAGGAGTTTGAGCGA
GTCTCTCGCGAGCGAAGGCTCTTCACCAACAATGGTCATGGCTCCTACGAGTCCGGCTGG
GTGTCCGTCCCATTCCGCCACCCCTCCACCTTTGAAACCCTCGCGCTGGAGCCGCAGCTC
CGGCAACAGATAACGGACGACCTGACCGCGTTCGCCAACGGGAAGGAGTTCTACCATAGG
GTGGGACGCGCATGGAAACGTGGGTATTTGCTATACGGACCGCCTGGGTCCGGCAAATCG
AGTTTGATCGCAGCAATGGCGAATTACCTCTGCTACGACGTTTACGACCTGGAGCTCACC
AAAGTCTCCGACAACTCCGAGCTCAGAGCACTTCTGATACAGACCACTAACCGCTCCATC
ATCGTCATCGAGGACATCGACTGCTCAGTCGATCTAACGGCGGACAGGCTGTCAAAGACG
AAGAGAACGACACCGGCGAAAGGGTCCAGCAGAGACGAGGGTGAGGAGAACGGGCGGGTG
ACGTTGTCGGGGCTGTTGAATTTCACCGACGGACTGTGGTCGTGTTGTGGGGAGGAGAGG
ATCATCGTCTTCACCACCAACCACAGGGACAATGTTGACCCAGCGCTCGTTAGATGCGGC
CGGATGGACGTTCACGTTAGCCTCGGCACCTGCGGCATACACGCCTTTAAGGCCTTGGCC
GCCAACTACCTGGGCTTGGAGTCCCACCCTCTGTTCGACGTCGTGGAGAGCTGTATAAGG
TCCGGCGGGACACTCACGCCAGCACAAGTTGGAGAAATACTACTGAGGAATAGAAGAGAC
GCTGAAGTGGCAATCAAGGCGGTGATATCGGCAATGCAGGCAAGGATTTTGGGAGCCGAA
AGGGAACCCATAGAGTATGAGGAGATGGCGAAGTCGCCGGAGAGCGTGGAGAGGGGGCTG
ATGGAGTCGCCGGAGAATTGGGAGACGTCGTCGCCAGGGAAATACGTGAGGAAGAAGAGG
AAGGAGGGGGGTTCAGTTACAGGTTCAGGAAGTAGCTGGGAGAAGAAAGTCAAATTCTTG
GTGAGACTGAGATCTTTGACCAAGTCTGACTCTGGAAGAAGGGGTTGTTAA

Peptide Sequence

PEP ID

VIT_13s0156g00110.t01
PEP Infomation

pep chromosome:12X:13:23876862:23878521:1 gene:VIT_13s0156g00110 transcript:VIT_13s0156g00110.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEILSQMWSFLGLLTVLQNVLPSQILSLLHSFYESLQDFFSPFAYFEIPEFNDYCGVDVN
DLYRHVNLYLNSVNPATTCRRFTLSRSKSSNRISFTVAPNHTVHDSFNGHTLSWTHHVET
VQDSLDERRSFSLKLPKRHRQALLSPYLELVTSRAEEFERVSRERRLFTNNGHGSYESGW
VSVPFRHPSTFETLALEPQLRQQITDDLTAFANGKEFYHRVGRAWKRGYLLYGPPGSGKS
SLIAAMANYLCYDVYDLELTKVSDNSELRALLIQTTNRSIIVIEDIDCSVDLTADRLSKT
KRTTPAKGSSRDEGEENGRVTLSGLLNFTDGLWSCCGEERIIVFTTNHRDNVDPALVRCG
RMDVHVSLGTCGIHAFKALAANYLGLESHPLFDVVESCIRSGGTLTPAQVGEILLRNRRD
AEVAIKAVISAMQARILGAEREPIEYEEMAKSPESVERGLMESPENWETSSPGKYVRKKR
KEGGSVTGSGSSWEKKVKFLVRLRSLTKSDSGRRGC

Transcript Sequence

Transcript ID

VIT_13s0156g00110.t01
Transcript Infomation

cdna chromosome:12X:13:23876862:23878521:1 gene:VIT_13s0156g00110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACAAAATCATAAGCCACACTCAGGGTCAAGCCAAGATGGAGATATTGTCACAGATGTGGT
CTTTCTTAGGCCTCCTCACTGTACTCCAAAACGTCTTGCCATCCCAAATTCTGTCACTTC
TCCACTCCTTCTACGAGTCCCTTCAAGACTTCTTCTCCCCATTCGCCTACTTCGAGATCC
CTGAATTCAACGACTACTGCGGCGTCGACGTCAATGACCTCTACCGCCATGTCAACCTCT
ACCTCAACTCTGTCAACCCTGCCACCACCTGCCGCCGCTTCACCCTCTCGCGCTCCAAAT
CCTCCAACCGCATCTCCTTCACCGTCGCTCCTAATCACACAGTCCATGACTCCTTCAATG
GTCACACTCTCTCCTGGACCCACCACGTGGAGACGGTTCAGGACTCTCTGGACGAGAGGA
GAAGCTTCTCCCTCAAGCTCCCCAAGCGCCACCGCCAGGCCCTCCTCTCGCCCTACCTCG
AGCTCGTCACCTCTCGCGCTGAGGAGTTTGAGCGAGTCTCTCGCGAGCGAAGGCTCTTCA
CCAACAATGGTCATGGCTCCTACGAGTCCGGCTGGGTGTCCGTCCCATTCCGCCACCCCT
CCACCTTTGAAACCCTCGCGCTGGAGCCGCAGCTCCGGCAACAGATAACGGACGACCTGA
CCGCGTTCGCCAACGGGAAGGAGTTCTACCATAGGGTGGGACGCGCATGGAAACGTGGGT
ATTTGCTATACGGACCGCCTGGGTCCGGCAAATCGAGTTTGATCGCAGCAATGGCGAATT
ACCTCTGCTACGACGTTTACGACCTGGAGCTCACCAAAGTCTCCGACAACTCCGAGCTCA
GAGCACTTCTGATACAGACCACTAACCGCTCCATCATCGTCATCGAGGACATCGACTGCT
CAGTCGATCTAACGGCGGACAGGCTGTCAAAGACGAAGAGAACGACACCGGCGAAAGGGT
CCAGCAGAGACGAGGGTGAGGAGAACGGGCGGGTGACGTTGTCGGGGCTGTTGAATTTCA
CCGACGGACTGTGGTCGTGTTGTGGGGAGGAGAGGATCATCGTCTTCACCACCAACCACA
GGGACAATGTTGACCCAGCGCTCGTTAGATGCGGCCGGATGGACGTTCACGTTAGCCTCG
GCACCTGCGGCATACACGCCTTTAAGGCCTTGGCCGCCAACTACCTGGGCTTGGAGTCCC
ACCCTCTGTTCGACGTCGTGGAGAGCTGTATAAGGTCCGGCGGGACACTCACGCCAGCAC
AAGTTGGAGAAATACTACTGAGGAATAGAAGAGACGCTGAAGTGGCAATCAAGGCGGTGA
TATCGGCAATGCAGGCAAGGATTTTGGGAGCCGAAAGGGAACCCATAGAGTATGAGGAGA
TGGCGAAGTCGCCGGAGAGCGTGGAGAGGGGGCTGATGGAGTCGCCGGAGAATTGGGAGA
CGTCGTCGCCAGGGAAATACGTGAGGAAGAAGAGGAAGGAGGGGGGTTCAGTTACAGGTT
CAGGAAGTAGCTGGGAGAAGAAAGTCAAATTCTTGGTGAGACTGAGATCTTTGACCAAGT
CTGACTCTGGAAGAAGGGGTTGTTAATTGAAAGGTCAAAATTTTGGGATTGAATTAGATG
TAATTTTGTAGTTTCTTCCTTAATTAATAACTAATTTAAG