Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0147g00230.t01
CDS Infomation

cds chromosome:12X:13:11335786:11337741:-1 gene:VIT_13s0147g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTAAGTGTAGTAGTATTTGTCATAAGGTTTTGTTACTCCTGTTGGTCTTCTTCACA
CCCTTTCAGCTGAGCTTCTTCCATGGGAAGTCATCAGAGTTTGAGCTAGAGGATGAGGCA
TGGCTAGATGAGAAGGATGATGAAGTTAACATGGTCCAAAGTGGGCATGATTCACTGGGT
TCTAGTTGTGAGTTTTCAGATGGCAAGTGGGTCTATGATCTGTCCTACCCTCTGTATGAT
TCGAGCTGCCCGTATCTTAGCACTCCGGTGACTTGTCAGAAGAATGGCAGGCCGGATTCT
GACTATGAGAAATGGAGGTGGAAGCCCCATGGTTGCTCCATTCCAAGGTTTGATGCACTG
CACTTTCTTGGAAGGATGAGAAGAAAGAGAATAATGCTGGTAGGGGATTCAATAATGAGG
AACCAATGGGAGTCTCTGGTCTGCCTTGTCCAAGAAGTGATCCCAACTGGTCGAAAGACA
GTTACCTATGATGGTCCCACCATGGCCTTCCATGCCCTAGATTTTGAGACCTCAATTGAG
TTTTGTTGGGCTCCATTCTTAGTTGAACTGAAGAAAGGGCCTCAAAACAAGAGAATTTTG
CATTTGGATTTGATAGAAGAGAATGCCAAGTACTGGAGAGGAGTTGATGTTCTGGTCTAT
GATTCAGCTCACTGGTGGACTCATTCTGACAAATGGAGTTCGTGGGACTACTACATGGAG
GCAAACACTGTGTTGAGGAGCATGAACCCAATGGTAGCCTATCAGAAAGGACTCACAACA
TGGGCTAAATGGGTGGACTTAAACTTAGACCCTCACAAAACCAGGGTGATTTTCCGAAGC
GTATCACCTAGACACAACAGGCAGAATGGTTGGAAATGCTACAACCAGAAGCAACCTCTA
GAGTTCTTCAGCCACCAACTTCATGTTCCAGAGCAAATGGTAGTGCTAAAAGGGGTGCTG
AAAGGGATGAGATTTCCAGTATACCTGCAAGACATCACAATGATGTCGGCTCTCCGAAAA
GACGGGCATCCATCTGTGTATACCAGAGCGATGGACCAAGAACAGAAGCAGCACCCAAGA
GACTTTACATCAGACTGTAGCCATTGGTGCCTGCCTGGGGTCCCTGATGCTTGGAATGAG
ATCTTGAGTGCATTGCTCCAAGTATGA

Peptide Sequence

PEP ID

VIT_13s0147g00230.t01
PEP Infomation

pep chromosome:12X:13:11335786:11337741:-1 gene:VIT_13s0147g00230 transcript:VIT_13s0147g00230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKCSSICHKVLLLLLVFFTPFQLSFFHGKSSEFELEDEAWLDEKDDEVNMVQSGHDSLG
SSCEFSDGKWVYDLSYPLYDSSCPYLSTPVTCQKNGRPDSDYEKWRWKPHGCSIPRFDAL
HFLGRMRRKRIMLVGDSIMRNQWESLVCLVQEVIPTGRKTVTYDGPTMAFHALDFETSIE
FCWAPFLVELKKGPQNKRILHLDLIEENAKYWRGVDVLVYDSAHWWTHSDKWSSWDYYME
ANTVLRSMNPMVAYQKGLTTWAKWVDLNLDPHKTRVIFRSVSPRHNRQNGWKCYNQKQPL
EFFSHQLHVPEQMVVLKGVLKGMRFPVYLQDITMMSALRKDGHPSVYTRAMDQEQKQHPR
DFTSDCSHWCLPGVPDAWNEILSALLQV

Transcript Sequence

Transcript ID

VIT_13s0147g00230.t01
Transcript Infomation

cdna chromosome:12X:13:11335786:11337741:-1 gene:VIT_13s0147g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCCTGAATAATGGAACCAGTGCACTCCACTTAAAGGGTGTTTAGTCCCTTTTCTGAGCCT
CAACCCCCATTTCTCTCCAATGGCTAAGTGTAGTAGTATTTGTCATAAGGTTTTGTTACT
CCTGTTGGTCTTCTTCACACCCTTTCAGCTGAGCTTCTTCCATGGGAAGTCATCAGAGTT
TGAGCTAGAGGATGAGGCATGGCTAGATGAGAAGGATGATGAAGTTAACATGGTCCAAAG
TGGGCATGATTCACTGGGTTCTAGTTGTGAGTTTTCAGATGGCAAGTGGGTCTATGATCT
GTCCTACCCTCTGTATGATTCGAGCTGCCCGTATCTTAGCACTCCGGTGACTTGTCAGAA
GAATGGCAGGCCGGATTCTGACTATGAGAAATGGAGGTGGAAGCCCCATGGTTGCTCCAT
TCCAAGGTTTGATGCACTGCACTTTCTTGGAAGGATGAGAAGAAAGAGAATAATGCTGGT
AGGGGATTCAATAATGAGGAACCAATGGGAGTCTCTGGTCTGCCTTGTCCAAGAAGTGAT
CCCAACTGGTCGAAAGACAGTTACCTATGATGGTCCCACCATGGCCTTCCATGCCCTAGA
TTTTGAGACCTCAATTGAGTTTTGTTGGGCTCCATTCTTAGTTGAACTGAAGAAAGGGCC
TCAAAACAAGAGAATTTTGCATTTGGATTTGATAGAAGAGAATGCCAAGTACTGGAGAGG
AGTTGATGTTCTGGTCTATGATTCAGCTCACTGGTGGACTCATTCTGACAAATGGAGTTC
GTGGGACTACTACATGGAGGCAAACACTGTGTTGAGGAGCATGAACCCAATGGTAGCCTA
TCAGAAAGGACTCACAACATGGGCTAAATGGGTGGACTTAAACTTAGACCCTCACAAAAC
CAGGGTGATTTTCCGAAGCGTATCACCTAGACACAACAGGCAGAATGGTTGGAAATGCTA
CAACCAGAAGCAACCTCTAGAGTTCTTCAGCCACCAACTTCATGTTCCAGAGCAAATGGT
AGTGCTAAAAGGGGTGCTGAAAGGGATGAGATTTCCAGTATACCTGCAAGACATCACAAT
GATGTCGGCTCTCCGAAAAGACGGGCATCCATCTGTGTATACCAGAGCGATGGACCAAGA
ACAGAAGCAGCACCCAAGAGACTTTACATCAGACTGTAGCCATTGGTGCCTGCCTGGGGT
CCCTGATGCTTGGAATGAGATCTTGAGTGCATTGCTCCAAGTATGAACAATCAAGACATC
TTTGTAGCTATATATGGGTAGAAGATTAGTGTCTGTCTTGTCTGTCTTAGACTCTGTAAT
CATCAGTTTATGCTGCTTTGATTTTTATTTTTATTTTTTGGGATTTCTGGGTTAGTGCTG
TATGCCTGGTTTGTGACTGTTTCTCCGTGTCCGTATTGACTTGTTGGCTTTTTGCTGCTG
TTTCTCATAGGCTACCTTTTGTTTACCTAAAAGCTTAAATTTGTGAAATAACCATCTTGC
CAGAC