Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0139g00250.t01
CDS Infomation

cds chromosome:12X:13:20496637:20507114:1 gene:VIT_13s0139g00250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCAGACGTGCAGGTCCTTGTGAATGAATTCATAATCAAGCTAAAAAAACGTAAGGTT
GAGGGCTCACAGGCAACAGCAAGGATGACTGCTGAATTGCTCCGCTCAGTCATTTCACAG
CAGCGAGTTCCCTACAATAACCAGGCTGGGGCTCTGATCGACGCCATAAAGGCTGTTGGA
GAGCAGCTGATTGCTGCCAATCCTGTTGAGCTTGCTGTTGGTAATATTGTGCGGCGGGTT
TTGCATATTATTAGGGAGGAGGACCTTTCTCTTGCAACTGCCGCTGTGGCTGGGCTGAAT
TTATCAGCTGTAAGTGATGATGAAGATGATGGCGAGCGAGAGGACCACCCTGTTTTATCA
GCTGCTGCTGTTGCTGCTGCTGCCAGAAGCACTCTGCGTCCCCCTTCTTTACAAACCCTT
CTTGAGGACATGCCTGACTCAGCAGCTGTTCCTCAAAGTTCTTCTTCTGGTGGTGATTCT
GAAGGAAAAAGCAAATCTGCTGATAAAAGTTCAAGGAGCCGGAAGCTGAAGCATGACATT
ATTGAGGCAGTTAATGAACTTATTCAAGATATCGCCACTTGCCATGAACAGATTTCTGAG
CAAGCAGTGGAGCACATTCATCAAAATGAGGTTATATTAACTTTAGGCCGGTCGAGAACA
GTAATGGAATTTCTTTGTGCCGCAAAGGAGAAAAAAAGATCATTCCGGGTATTTGTTGCA
GAGGGCGCTCCAAGGTACCAGGGGCATGTGCTTGCAAAAGAATTGGTTGCAAGAGGTTTA
CAGACCACTCTGATCACTGATTCTGCAGTTTTTGCCATGATTTCTCGTGTGAACATGGTT
ATAGTTGGAGCTCATGCTGTAATGGCGAATGGTGGGGTTATAGCACCTGTTGGGTTAAAT
ATGGTTGCACTAGCTGCTCAGAGGCATGCTGTCCCTTTTGTTGTACTTGCTGGCACTCAC
AAGTTGTGCCCTTTGTATCCACACAATCCAGAGGTCTTATTGAATGAATTGAAATCCCCA
TCTGAGCTGCTGGATTTTGGAGAATTCTCAGATTGTATGGACTTTGGAAGTGGCAATGGT
TCCCCTCTTCTTCATGTTGTCAATCCTGCATTTGATTATGTGCCACCAAAGCTTGTTAGT
CTATTTATCACTGACACAGGGGGACATAACCCATCATACATGTACCGGCTCATTGCGGAC
TATTACTCTGCTGATGATCTGGTGGTGCAGCGGAGACCTGCATCTGGAAATTGA

Peptide Sequence

PEP ID

VIT_13s0139g00250.t01
PEP Infomation

pep chromosome:12X:13:20496637:20507114:1 gene:VIT_13s0139g00250 transcript:VIT_13s0139g00250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPDVQVLVNEFIIKLKKRKVEGSQATARMTAELLRSVISQQRVPYNNQAGALIDAIKAVG
EQLIAANPVELAVGNIVRRVLHIIREEDLSLATAAVAGLNLSAVSDDEDDGEREDHPVLS
AAAVAAAARSTLRPPSLQTLLEDMPDSAAVPQSSSSGGDSEGKSKSADKSSRSRKLKHDI
IEAVNELIQDIATCHEQISEQAVEHIHQNEVILTLGRSRTVMEFLCAAKEKKRSFRVFVA
EGAPRYQGHVLAKELVARGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLN
MVALAAQRHAVPFVVLAGTHKLCPLYPHNPEVLLNELKSPSELLDFGEFSDCMDFGSGNG
SPLLHVVNPAFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVQRRPASGN

Transcript Sequence

Transcript ID

VIT_13s0139g00250.t01
Transcript Infomation

cdna chromosome:12X:13:20496637:20507114:1 gene:VIT_13s0139g00250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGAAGGAACTAAAGGCCCAGCAGGTAAAGTTAAGTAATAATCATGCCAGACGTGCAGGT
CCTTGTGAATGAATTCATAATCAAGCTAAAAAAACGTAAGGTTGAGGGCTCACAGGCAAC
AGCAAGGATGACTGCTGAATTGCTCCGCTCAGTCATTTCACAGCAGCGAGTTCCCTACAA
TAACCAGGCTGGGGCTCTGATCGACGCCATAAAGGCTGTTGGAGAGCAGCTGATTGCTGC
CAATCCTGTTGAGCTTGCTGTTGGTAATATTGTGCGGCGGGTTTTGCATATTATTAGGGA
GGAGGACCTTTCTCTTGCAACTGCCGCTGTGGCTGGGCTGAATTTATCAGCTGTAAGTGA
TGATGAAGATGATGGCGAGCGAGAGGACCACCCTGTTTTATCAGCTGCTGCTGTTGCTGC
TGCTGCCAGAAGCACTCTGCGTCCCCCTTCTTTACAAACCCTTCTTGAGGACATGCCTGA
CTCAGCAGCTGTTCCTCAAAGTTCTTCTTCTGGTGGTGATTCTGAAGGAAAAAGCAAATC
TGCTGATAAAAGTTCAAGGAGCCGGAAGCTGAAGCATGACATTATTGAGGCAGTTAATGA
ACTTATTCAAGATATCGCCACTTGCCATGAACAGATTTCTGAGCAAGCAGTGGAGCACAT
TCATCAAAATGAGGTTATATTAACTTTAGGCCGGTCGAGAACAGTAATGGAATTTCTTTG
TGCCGCAAAGGAGAAAAAAAGATCATTCCGGGTATTTGTTGCAGAGGGCGCTCCAAGGTA
CCAGGGGCATGTGCTTGCAAAAGAATTGGTTGCAAGAGGTTTACAGACCACTCTGATCAC
TGATTCTGCAGTTTTTGCCATGATTTCTCGTGTGAACATGGTTATAGTTGGAGCTCATGC
TGTAATGGCGAATGGTGGGGTTATAGCACCTGTTGGGTTAAATATGGTTGCACTAGCTGC
TCAGAGGCATGCTGTCCCTTTTGTTGTACTTGCTGGCACTCACAAGTTGTGCCCTTTGTA
TCCACACAATCCAGAGGTCTTATTGAATGAATTGAAATCCCCATCTGAGCTGCTGGATTT
TGGAGAATTCTCAGATTGTATGGACTTTGGAAGTGGCAATGGTTCCCCTCTTCTTCATGT
TGTCAATCCTGCATTTGATTATGTGCCACCAAAGCTTGTTAGTCTATTTATCACTGACAC
AGGGGGACATAACCCATCATACATGTACCGGCTCATTGCGGACTATTACTCTGCTGATGA
TCTGGTGGTGCAGCGGAGACCTGCATCTGGAAATTGACTTTAGTTCCCCTATTTCTAGTA
TGTTTCAAATAGTTCAGGAATACACCACAGAAGAAAATGCTGGCAGGGAAAAATGGATTC
AAATATTAGTGTATTGGACTGCATCGACTGTTTTGAGGGTAGAAGTGACTCAGGGAAAAC
TATGGTTCGATGGGAAGAAACAAATGGTGCAAGTGGTTTCTGTGATTGTGATGAAGTAAA
AAGGCAAAGCAGTGATCAAAGGAAGAAAAGAAACGACAGCCAAGTGAATTCTTTAATTGT
GTAGAGGAAAGAGGCCAAGAGCTGTATCCTGTAGCAAAACTATGATACAAAGCACTCTTT
GATGTTAATGGACTATTTCATTATATACCCTAGCAGTGAAATTAATAACAGTTCGCATCT
GATTGGAACTT