Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0106g00780.t01
CDS Infomation

cds chromosome:12X:13:10639987:10643575:1 gene:VIT_13s0106g00780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGGAGTTAGCAGGAAAATATCAGCTGCTTCTGCGAGGTCTCACACCAGAAAGTCT
CGTCATAACACCTCTAAGCTCCCTTCAGGGATGTTAAAGAATATTATACTGGTCTTGTTG
ATTGGGTTGTTGTCATGGGGATATCAGGCTGCCCGTCCTCCGCCACCCAAAATCTGTGGT
TCCCCAGGCGGGCCAGCCATTACGGCACATAGAATAAAGCTGAGGGATGGAAGGCATTTG
GCCTACAAGGAACATGGTGTCTCAAAACAAGTGGCCAAATATAAGATTATATTCTTTCAT
GGATTTGGCAGCACCAGACATGAAGCGATAATTGGAACACACATGTCGCCGGGAAGTGTT
GAAGAACTAGGGGTATACGTTGTATCTTTTGACAGACCAGGCTATGGAGAAAGTGATCCA
AATCCGAAGCGAACGATGAAGAGCTTGGCGTTGGATGTGGAAGAGCTTGCTGATCAGTTG
GAACTTGGACCTAAATTTTATGTAGTAGGGTATTCTATGGGAGGCCAGGCTGTTTGGGGC
TGCCTCAAGTACATCCCCCATCGGCTAGCAGGAGCAACATTGATCGCTCCAGTCATAAAC
TACTGGTGGCCAGGGTTTCCTGCCAATTTATCTAAAGAAGCCTACTACCAACAATTTCCC
CAGGACCAGTGGGCACTTCGTGTTGCACACTATACTCCATGGCTCACCTACTGGTGGAAC
ACCCAGAAACTGTTTCCTGCTTCAAGTGTGATTGGCGGAAAGCCTCAACTCTCTCGCAAA
GATATGGAAATTATCCAACAGATGCCGGCAAGACCAAGGCACCTGATGCTTCAGGCAAGT
CAGCAAGGAGAATTTGAGTCCATCCACCGTGATTTGATGATTGGATTTGGAAGCTGGGAG
TTTGATCCTCTGGAGCTTGAGAACCCTTTTCCTAACAACGAAGGGTCAGTTCATATATGG
CAAGGTGATGAAGATGGCCTTGTGCCTGTTATGCTGCAACGGTATATTGCAGGGAAACTT
TCATGGATTCAGTACCATGAAGTACCAGGTGCTGGGCACTTGTTTCCTATCGCAGATGGC
ATGACTGATGTTATAGTAAAGGCACTTTTACTGGGGGAAAAGTAG

Peptide Sequence

PEP ID

VIT_13s0106g00780.t01
PEP Infomation

pep chromosome:12X:13:10639987:10643575:1 gene:VIT_13s0106g00780 transcript:VIT_13s0106g00780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGVSRKISAASARSHTRKSRHNTSKLPSGMLKNIILVLLIGLLSWGYQAARPPPPKICG
SPGGPAITAHRIKLRDGRHLAYKEHGVSKQVAKYKIIFFHGFGSTRHEAIIGTHMSPGSV
EELGVYVVSFDRPGYGESDPNPKRTMKSLALDVEELADQLELGPKFYVVGYSMGGQAVWG
CLKYIPHRLAGATLIAPVINYWWPGFPANLSKEAYYQQFPQDQWALRVAHYTPWLTYWWN
TQKLFPASSVIGGKPQLSRKDMEIIQQMPARPRHLMLQASQQGEFESIHRDLMIGFGSWE
FDPLELENPFPNNEGSVHIWQGDEDGLVPVMLQRYIAGKLSWIQYHEVPGAGHLFPIADG
MTDVIVKALLLGEK

Transcript Sequence

Transcript ID

VIT_13s0106g00780.t01
Transcript Infomation

cdna chromosome:12X:13:10639987:10643575:1 gene:VIT_13s0106g00780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGGGTTTGGTGCAGGTCTTGTGTAAATTGTGGTATAAAAGAAGTGGTGAAGATTGTGAGA
AATGGCTGGAGTTAGCAGGAAAATATCAGCTGCTTCTGCGAGGTCTCACACCAGAAAGTC
TCGTCATAACACCTCTAAGCTCCCTTCAGGGATGTTAAAGAATATTATACTGGTCTTGTT
GATTGGGTTGTTGTCATGGGGATATCAGGCTGCCCGTCCTCCGCCACCCAAAATCTGTGG
TTCCCCAGGCGGGCCAGCCATTACGGCACATAGAATAAAGCTGAGGGATGGAAGGCATTT
GGCCTACAAGGAACATGGTGTCTCAAAACAAGTGGCCAAATATAAGATTATATTCTTTCA
TGGATTTGGCAGCACCAGACATGAAGCGATAATTGGAACACACATGTCGCCGGGAAGTGT
TGAAGAACTAGGGGTATACGTTGTATCTTTTGACAGACCAGGCTATGGAGAAAGTGATCC
AAATCCGAAGCGAACGATGAAGAGCTTGGCGTTGGATGTGGAAGAGCTTGCTGATCAGTT
GGAACTTGGACCTAAATTTTATGTAGTAGGGTATTCTATGGGAGGCCAGGCTGTTTGGGG
CTGCCTCAAGTACATCCCCCATCGGCTAGCAGGAGCAACATTGATCGCTCCAGTCATAAA
CTACTGGTGGCCAGGGTTTCCTGCCAATTTATCTAAAGAAGCCTACTACCAACAATTTCC
CCAGGACCAGTGGGCACTTCGTGTTGCACACTATACTCCATGGCTCACCTACTGGTGGAA
CACCCAGAAACTGTTTCCTGCTTCAAGTGTGATTGGCGGAAAGCCTCAACTCTCTCGCAA
AGATATGGAAATTATCCAACAGATGCCGGCAAGACCAAGGCACCTGATGCTTCAGGCAAG
TCAGCAAGGAGAATTTGAGTCCATCCACCGTGATTTGATGATTGGATTTGGAAGCTGGGA
GTTTGATCCTCTGGAGCTTGAGAACCCTTTTCCTAACAACGAAGGGTCAGTTCATATATG
GCAAGGTGATGAAGATGGCCTTGTGCCTGTTATGCTGCAACGGTATATTGCAGGGAAACT
TTCATGGATTCAGTACCATGAAGTACCAGGTGCTGGGCACTTGTTTCCTATCGCAGATGG
CATGACTGATGTTATAGTAAAGGCACTTTTACTGGGGGAAAAGTAGTCAGGTTTAGGCAT
GGCCGGACAGAGCTCTTTGTGAACTGGGTCAAAGGTTAAGAGAA