Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0106g00640.t01
CDS Infomation

cds chromosome:12X:13:10370210:10380021:1 gene:VIT_13s0106g00640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGGCTCTGCGGACGATCTCGGAGCCCCTGAGTCCTGGGAGGTCGCTGATTTGGAC
GAGAGCATGAGCAGATTGATGCTCTCCTCTTCATCCTCCAAGAAAGATTCCTCTTCCTCT
TCCTCTCTCGATGCCTCGGTACCAGCTTCAGCTTCTGCTTCTGCTCCGGCTTTGTCGTCT
TCGTCGGTGCCGGTTGGTTCCGGGATGATTTCTGAGGACTCTGTCAACCAAGTGGATCAG
TTTCTTCGTGAGGCTCTGCAGAATCCGCGTGAGCGGCTGTCAATTCTAAGGATGGAGCAA
GACATCGAGAAGTTCATTCATGATCCTACTCAACAGCAACTAGAGTTTCAACAGTTGCCT
ACCTCCTATCTACGGTTGGCTGCGCACCGTGTGGCTCAGCATTACTCACTGCAGTCAATG
GTTTTATTGGACAATAATTTACCTGATGGATCTGGTTCCAAAATTATTGTTCGCAAAACT
TCTGAGTGTCGGCTTCCTCTGATTCGCCTGGCAGACATCCCTGTAAGCTTACCACCAGAA
GATGGTGGTGTCATTAAGGTTGCAATCAAACAGAGGCCTCAGAAACGATCGCAAAATGTC
AGTTGTGCAAATTCACATTCTTTTAAGGCAAATAATTCCAAAAGTGTAGAAGAACGAAAA
GAGGAGTATAACAGAGCTCGTGCACGGATATTTAACTCTAGTAGTTTTAGTGGTACTGGT
GGGGGGAAACCTGAATGTGAACCAAGGATGCAGGATACTTTCCAGCATGGTTCTGTGAGT
TTACCGAAAATGGAAGAAAAACCTGTTGCTGGAAGTTCTGATGTCAATATTTGCAGGGGT
TTGGTTGATTCTTCTACAAGTAGCAATAGATCAGCTAGAAGTAGGGCAGAAAAGGAGCCA
ATTGGTAGGTACAAACCAAATAATAGGGTGGCTATCTTTCGGGACCGTGAGATTGACCGT
AAGGATCCTGATTATGACAGGAGCTATGATAGGTACCTGCAAAGATTTGATCCTGGATTT
GGGTTCAATGGAGGACCTTACACTATACAGCCTATGTACACTCCTGCAGTGAACTACAAT
ACTGAATTCCCACAACTTGGATCAGCTCATAGGCCTCAAATTTCTACTGAACACCAACCT
CGGCCACTTCCCCAACATTTATCTGGTCCATGGCCTGCACCATCAACTCCTACAGGAATT
GGGTATGGTCATCCAGAGACCATGATGTCACCATTTAATCCCAATCATGTTGGTGCACGC
TCCACATCTACCCTATATCTTCCTTCTTCTCAGTATCCTTGTCAACGTCCTGGAATGCCT
TTCATCCATCCTCATGAACATGTTCACCAACCTTTTTCACAGTCTCATCAACAGCAACCT
GATACAAGTTTTGGATTAGCCCGGCCCCGGTAA

Peptide Sequence

PEP ID

VIT_13s0106g00640.t01
PEP Infomation

pep chromosome:12X:13:10370210:10380021:1 gene:VIT_13s0106g00640 transcript:VIT_13s0106g00640.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEGSADDLGAPESWEVADLDESMSRLMLSSSSSKKDSSSSSSLDASVPASASASAPALSS
SSVPVGSGMISEDSVNQVDQFLREALQNPRERLSILRMEQDIEKFIHDPTQQQLEFQQLP
TSYLRLAAHRVAQHYSLQSMVLLDNNLPDGSGSKIIVRKTSECRLPLIRLADIPVSLPPE
DGGVIKVAIKQRPQKRSQNVSCANSHSFKANNSKSVEERKEEYNRARARIFNSSSFSGTG
GGKPECEPRMQDTFQHGSVSLPKMEEKPVAGSSDVNICRGLVDSSTSSNRSARSRAEKEP
IGRYKPNNRVAIFRDREIDRKDPDYDRSYDRYLQRFDPGFGFNGGPYTIQPMYTPAVNYN
TEFPQLGSAHRPQISTEHQPRPLPQHLSGPWPAPSTPTGIGYGHPETMMSPFNPNHVGAR
STSTLYLPSSQYPCQRPGMPFIHPHEHVHQPFSQSHQQQPDTSFGLARPR

Transcript Sequence

Transcript ID

VIT_13s0106g00640.t01
Transcript Infomation

cdna chromosome:12X:13:10370210:10380021:1 gene:VIT_13s0106g00640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTAATCTAACTCTAACTCCCAATTCATGAAAATTCACGCCCATTCACCTGCGATTCCTCT
CTCCACCCTGGAATCTCTTTGATGCTATCCTTCACACGCAAGCCCTAGATATTCCCCAGC
CATGGAGGGCTCTGCGGACGATCTCGGAGCCCCTGAGTCCTGGGAGGTCGCTGATTTGGA
CGAGAGCATGAGCAGATTGATGCTCTCCTCTTCATCCTCCAAGAAAGATTCCTCTTCCTC
TTCCTCTCTCGATGCCTCGGTACCAGCTTCAGCTTCTGCTTCTGCTCCGGCTTTGTCGTC
TTCGTCGGTGCCGGTTGGTTCCGGGATGATTTCTGAGGACTCTGTCAACCAAGTGGATCA
GTTTCTTCGTGAGGCTCTGCAGAATCCGCGTGAGCGGCTGTCAATTCTAAGGATGGAGCA
AGACATCGAGAAGTTCATTCATGATCCTACTCAACAGCAACTAGAGTTTCAACAGTTGCC
TACCTCCTATCTACGGTTGGCTGCGCACCGTGTGGCTCAGCATTACTCACTGCAGTCAAT
GGTTTTATTGGACAATAATTTACCTGATGGATCTGGTTCCAAAATTATTGTTCGCAAAAC
TTCTGAGTGTCGGCTTCCTCTGATTCGCCTGGCAGACATCCCTGTAAGCTTACCACCAGA
AGATGGTGGTGTCATTAAGGTTGCAATCAAACAGAGGCCTCAGAAACGATCGCAAAATGT
CAGTTGTGCAAATTCACATTCTTTTAAGGCAAATAATTCCAAAAGTGTAGAAGAACGAAA
AGAGGAGTATAACAGAGCTCGTGCACGGATATTTAACTCTAGTAGTTTTAGTGGTACTGG
TGGGGGGAAACCTGAATGTGAACCAAGGATGCAGGATACTTTCCAGCATGGTTCTGTGAG
TTTACCGAAAATGGAAGAAAAACCTGTTGCTGGAAGTTCTGATGTCAATATTTGCAGGGG
TTTGGTTGATTCTTCTACAAGTAGCAATAGATCAGCTAGAAGTAGGGCAGAAAAGGAGCC
AATTGGTAGGTACAAACCAAATAATAGGGTGGCTATCTTTCGGGACCGTGAGATTGACCG
TAAGGATCCTGATTATGACAGGAGCTATGATAGGTACCTGCAAAGATTTGATCCTGGATT
TGGGTTCAATGGAGGACCTTACACTATACAGCCTATGTACACTCCTGCAGTGAACTACAA
TACTGAATTCCCACAACTTGGATCAGCTCATAGGCCTCAAATTTCTACTGAACACCAACC
TCGGCCACTTCCCCAACATTTATCTGGTCCATGGCCTGCACCATCAACTCCTACAGGAAT
TGGGTATGGTCATCCAGAGACCATGATGTCACCATTTAATCCCAATCATGTTGGTGCACG
CTCCACATCTACCCTATATCTTCCTTCTTCTCAGTATCCTTGTCAACGTCCTGGAATGCC
TTTCATCCATCCTCATGAACATGTTCACCAACCTTTTTCACAGTCTCATCAACAGCAACC
TGATACAAGTTTTGGATTAGCCCGGCCCCGGTAAGGGGCATGGGCCATGCCTGCACCCTG
CCAGCTGAAACTCAAGCTTGAAATATGACAGCCTGCTACAATGATATCTGTGGTGGTGTA
TGTCATCTCATTTTGGCAGGAGTGCAGGCATAGAAAACCGAGGTGGACTGGAGTGACACA
TCAATCTCATGGATGTCCTCTATCATCCATTCGATGAGCCCCTCGGTTCAATATGAGGCT
TCTTGCATCTTCAATGCTGAAGCTCACTGGGATTGCAGTCCCATTGTTTGGACAAGCTAT
TTAGAAGCTTGTTATTTCACTGACGATGATGAAGA