Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0106g00500.t01
CDS Infomation

cds chromosome:12X:13:10138366:10145712:-1 gene:VIT_13s0106g00500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAACTCTCTGTCCCTCAGCCACCACCTTCAACATCACCAGAAAATTCTCCCACAAA
ATTCAGTCTCAAGCTTCCTCTCTCTTCCACACAACCCTTGCATTTCCCAGTCCATTCAAA
AACAACTACAACAACAATCTCTTGAATCTATCTTATTCTTCTTCTTGTTCCATTTCTTGT
GTTTCTTCATCTTCATCAACAGCAACAAACGCAGTATCAGCATCTACAACTTCCACTTCC
CTTGCTTTCTCTGCTTCAGCTGGCGAGCGGCAGCGCCACTGGATGGTGCAAATGGAGGCT
CCTCCACAAGTGCTTCGTTCCAAAGCTGAGATTATTGATTACTATGTCAGAACCCTTGAA
ACGGTTCTGGGCAGCGAGAAGGATGCTCAGATGTGTATATATGATGCTTCTTGGGATGCC
CCTTTTGGTTTCTGTTGCGATATCGATGCAGAAACTTCTCGCGAGCTTTCTGGTTTACAG
GGGGTTTTATCTGTTAAACCCGACCCCAATTTTAACTCTGTGAAAAAGGACTATACCTTT
TCGAATATTCAACTGGGTAGTGTGTCAAACTCAGACATTGGAAGTCCTCAATTATTTCCT
GCGGGGAATTCCAAGTACTGGCTTGTTCAAATGGACAGACCAACAGTTGGAGTTGTTACC
AAGGCGCAGATGGTTGATTTTTATGCTCAAATACTAACCAAGGTTTTGGGAAATGAGAAG
GATGCCCAAATGTGTATATATCACATTTCCTGGCAATCTGATTTTGGGTTTTGTTGTGAA
CTTGATGAGGAGTGTGCAAGAGAACTGGCAGGTGTGCCTGGTGTTTTATCAGTTCGCCCA
GATGAGAACTTTGAGTCCAATAATAAGGATTATGGAGGTGGTAGTTTACAGAATTCTACA
GATTCACTGGATTCTATGGAAGCAAATCAACCGACAAATATAAAAACTAAGAAACTTTTT
GTAACTGGGCTATCTTTCTATACATCTGAGAAAACCTTACGCGGAGCATTTGAAGGATTC
GGTGAACTTGTTGAAGTTAAGATTATAATGGATAAAATTTCTAAAAGGTCCAAAGGTTAT
GCATTTATAGAGTATACAACTGAAGAGGCTGCTAGTGCAGCTCTCAAAGAAATGAATGGC
AAGATTATTAATGGGTGGATGATAGTTGTTGATGTTGCCAAGCCAACCCCACAAAAGTAC
AGCAGGAGCCGTCCAAGACCAGCAGTCTGA

Peptide Sequence

PEP ID

VIT_13s0106g00500.t01
PEP Infomation

pep chromosome:12X:13:10138366:10145712:-1 gene:VIT_13s0106g00500 transcript:VIT_13s0106g00500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

METLCPSATTFNITRKFSHKIQSQASSLFHTTLAFPSPFKNNYNNNLLNLSYSSSCSISC
VSSSSSTATNAVSASTTSTSLAFSASAGERQRHWMVQMEAPPQVLRSKAEIIDYYVRTLE
TVLGSEKDAQMCIYDASWDAPFGFCCDIDAETSRELSGLQGVLSVKPDPNFNSVKKDYTF
SNIQLGSVSNSDIGSPQLFPAGNSKYWLVQMDRPTVGVVTKAQMVDFYAQILTKVLGNEK
DAQMCIYHISWQSDFGFCCELDEECARELAGVPGVLSVRPDENFESNNKDYGGGSLQNST
DSLDSMEANQPTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGY
AFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKPTPQKYSRSRPRPAV

Transcript Sequence

Transcript ID

VIT_13s0106g00500.t01
Transcript Infomation

cdna chromosome:12X:13:10138366:10145712:-1 gene:VIT_13s0106g00500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAGTAGATTGTGAGGGGTGAGTGTGGGCTGTCAAATGAAACATTGAAGTCTGCTATGGA
AACTCTCTGTCCCTCAGCCACCACCTTCAACATCACCAGAAAATTCTCCCACAAAATTCA
GTCTCAAGCTTCCTCTCTCTTCCACACAACCCTTGCATTTCCCAGTCCATTCAAAAACAA
CTACAACAACAATCTCTTGAATCTATCTTATTCTTCTTCTTGTTCCATTTCTTGTGTTTC
TTCATCTTCATCAACAGCAACAAACGCAGTATCAGCATCTACAACTTCCACTTCCCTTGC
TTTCTCTGCTTCAGCTGGCGAGCGGCAGCGCCACTGGATGGTGCAAATGGAGGCTCCTCC
ACAAGTGCTTCGTTCCAAAGCTGAGATTATTGATTACTATGTCAGAACCCTTGAAACGGT
TCTGGGCAGCGAGAAGGATGCTCAGATGTGTATATATGATGCTTCTTGGGATGCCCCTTT
TGGTTTCTGTTGCGATATCGATGCAGAAACTTCTCGCGAGCTTTCTGGTTTACAGGGGGT
TTTATCTGTTAAACCCGACCCCAATTTTAACTCTGTGAAAAAGGACTATACCTTTTCGAA
TATTCAACTGGGTAGTGTGTCAAACTCAGACATTGGAAGTCCTCAATTATTTCCTGCGGG
GAATTCCAAGTACTGGCTTGTTCAAATGGACAGACCAACAGTTGGAGTTGTTACCAAGGC
GCAGATGGTTGATTTTTATGCTCAAATACTAACCAAGGTTTTGGGAAATGAGAAGGATGC
CCAAATGTGTATATATCACATTTCCTGGCAATCTGATTTTGGGTTTTGTTGTGAACTTGA
TGAGGAGTGTGCAAGAGAACTGGCAGGTGTGCCTGGTGTTTTATCAGTTCGCCCAGATGA
GAACTTTGAGTCCAATAATAAGGATTATGGAGGTGGTAGTTTACAGAATTCTACAGATTC
ACTGGATTCTATGGAAGCAAATCAACCGACAAATATAAAAACTAAGAAACTTTTTGTAAC
TGGGCTATCTTTCTATACATCTGAGAAAACCTTACGCGGAGCATTTGAAGGATTCGGTGA
ACTTGTTGAAGTTAAGATTATAATGGATAAAATTTCTAAAAGGTCCAAAGGTTATGCATT
TATAGAGTATACAACTGAAGAGGCTGCTAGTGCAGCTCTCAAAGAAATGAATGGCAAGAT
TATTAATGGGTGGATGATAGTTGTTGATGTTGCCAAGCCAACCCCACAAAAGTACAGCAG
GAGCCGTCCAAGACCAGCAGTCTGACATGCGAATCCCTGCCAAAACAAGAGGGTTCTACT
AGTATAGGCAATCTGATAAAAGGACTGTTGGCTGTTCACCAGATTAATTGTGAATTGAGT
AGTTGGAAAAACCTTCATCTGCCTTAAGCCTTCACATATTTTATTGAAGATTTGAACTTC
ATACCTTGGTGGAGAATTTTGTGCACTTTATTAAAGCCTACCTGTCCATTGCCTTTCACA
TGTCTAATTGAAGATTCATCAGTTTAGATTCCATAGCATTTCTATTGCTAATACATTCTT
ATTTTAAAGTGCTCACTATCTAAGAAAACTGGGTCTTGGATTTTGGAA