Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0084g00830.t01
CDS Infomation

cds chromosome:12X:13:20080027:20088186:-1 gene:VIT_13s0084g00830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCACGTATCTCACCACTGTTTCTGGTTGTTTTGTCTCTTGGGTTTTTCTTTGCGACA
TACAACTTGTTAACAATGACAATTCATAATAGAGCTACGGGGACATTGGTTGTTGATGAA
TCAGACCATCGCTTATTATCTGATCCAATTATAGAGATGCCTGAGAATGTGAGAAAACCA
AAAAATGCCAAGTTGCCCTTCCACATTGCCCTAACAGCAACTGATGCTCCTTACAGCAAA
TGGCAGTGTCGCATAATGTACTACTGGTACAAGAAGAAAAAGGACTTGCCTGGATCAGAG
ATGGGAGGATTTACAAGGATTCTGCATTCAGGAAGTCCTGATAACCTGATGGAAGAGATT
CCTACTTTTGTGGTTGATCCTCTTCCTGCAGGTTTGGATCGGGGATACATTGTCCTAAAC
AGACCATGGGCCTTTGTGCAATGGCTGGAAAAGGCTACAATTGAGGAAGAATACATACTG
ATGGCAGAGCCTGATCACATATTTATAAAGCCCCTGCCTAATTTGGCACATGGAGACTAT
CCAGCTGCCTATCCCTTTTTCTACATTAAGCCTGTTCAAAATGAAAAAATAATAAGGAAG
TTCTATCCTGAGGAACATGGCCCTGTGACAAATGTTGATCCAATTGGCAACTCTCCTGTA
ATTATCAAGAGGGAGTTGTTGGAGAAGATTGCGCCTACATGGATGAATGTTTCTTTGAGA
ATGAAAGATGACCCAGAAACTGATAAAGTATTTGGATGGGTGCTAGAAATGTATGCATAT
GCAGTAGCATCTGCCTTGCATGGCGTGCAGCATATTCTTCAGAAGGACTTTATGTTGCAG
CCACCATGGGATTTAGAAACTGCAAAGAAGTTTATTATTCACTACACTTATGGATGTGAC
TACAACTTAAAGGGTGAGCTGACATATGGGAAAATTGGAGAGTGGCGATTTGACAAGAGA
TCATACCTACGTGGACCTCCTCCTAGAAACCTTTCCTTGCCGCCTCCAGGGGTTCCTGAA
AGTGTGGTGACTCTTGTGAAGATGGTGAACGAAGCAACTGCGAACCTTCCCCGGTGGGAC
ACACAATAG

Peptide Sequence

PEP ID

VIT_13s0084g00830.t01
PEP Infomation

pep chromosome:12X:13:20080027:20088186:-1 gene:VIT_13s0084g00830 transcript:VIT_13s0084g00830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MARISPLFLVVLSLGFFFATYNLLTMTIHNRATGTLVVDESDHRLLSDPIIEMPENVRKP
KNAKLPFHIALTATDAPYSKWQCRIMYYWYKKKKDLPGSEMGGFTRILHSGSPDNLMEEI
PTFVVDPLPAGLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFIKPLPNLAHGDY
PAAYPFFYIKPVQNEKIIRKFYPEEHGPVTNVDPIGNSPVIIKRELLEKIAPTWMNVSLR
MKDDPETDKVFGWVLEMYAYAVASALHGVQHILQKDFMLQPPWDLETAKKFIIHYTYGCD
YNLKGELTYGKIGEWRFDKRSYLRGPPPRNLSLPPPGVPESVVTLVKMVNEATANLPRWD
TQ

Transcript Sequence

Transcript ID

VIT_13s0084g00830.t01
Transcript Infomation

cdna chromosome:12X:13:20080027:20088186:-1 gene:VIT_13s0084g00830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCAGATTTTAAAACTGTGGCTCCATGATATCATGGACTGGTGAACTGGAGGAGTGTCAT
CAAGCTAATGGTTTTCTTCATTAGTTGTTTCAAGTAGGAGAATTGGTTTGTTTGGCTCTG
AGGATTAGAATTCTGTTTCCTTTATGATAAAAAAATGATTGTGAGGAAGGCCATGGCACG
TATCTCACCACTGTTTCTGGTTGTTTTGTCTCTTGGGTTTTTCTTTGCGACATACAACTT
GTTAACAATGACAATTCATAATAGAGCTACGGGGACATTGGTTGTTGATGAATCAGACCA
TCGCTTATTATCTGATCCAATTATAGAGATGCCTGAGAATGTGAGAAAACCAAAAAATGC
CAAGTTGCCCTTCCACATTGCCCTAACAGCAACTGATGCTCCTTACAGCAAATGGCAGTG
TCGCATAATGTACTACTGGTACAAGAAGAAAAAGGACTTGCCTGGATCAGAGATGGGAGG
ATTTACAAGGATTCTGCATTCAGGAAGTCCTGATAACCTGATGGAAGAGATTCCTACTTT
TGTGGTTGATCCTCTTCCTGCAGGTTTGGATCGGGGATACATTGTCCTAAACAGACCATG
GGCCTTTGTGCAATGGCTGGAAAAGGCTACAATTGAGGAAGAATACATACTGATGGCAGA
GCCTGATCACATATTTATAAAGCCCCTGCCTAATTTGGCACATGGAGACTATCCAGCTGC
CTATCCCTTTTTCTACATTAAGCCTGTTCAAAATGAAAAAATAATAAGGAAGTTCTATCC
TGAGGAACATGGCCCTGTGACAAATGTTGATCCAATTGGCAACTCTCCTGTAATTATCAA
GAGGGAGTTGTTGGAGAAGATTGCGCCTACATGGATGAATGTTTCTTTGAGAATGAAAGA
TGACCCAGAAACTGATAAAGTATTTGGATGGGTGCTAGAAATGTATGCATATGCAGTAGC
ATCTGCCTTGCATGGCGTGCAGCATATTCTTCAGAAGGACTTTATGTTGCAGCCACCATG
GGATTTAGAAACTGCAAAGAAGTTTATTATTCACTACACTTATGGATGTGACTACAACTT
AAAGGGTGAGCTGACATATGGGAAAATTGGAGAGTGGCGATTTGACAAGAGATCATACCT
ACGTGGACCTCCTCCTAGAAACCTTTCCTTGCCGCCTCCAGGGGTTCCTGAAAGTGTGGT
GACTCTTGTGAAGATGGTGAACGAAGCAACTGCGAACCTTCCCCGGTGGGACACACAATA
GATAGGCTATGGTTGAAAAGGATAAAGGCCATGAAACCTCAATTTTGACAACAAAGAAAA
TTCAGATCACAGCATAGCCTCTCAGAAAAGATCGATGTATACAGACCTCAGGTGAAATAT
TTTAAGGTATCAAAAAGAACAGTGTAGACTGAATAAGAATATTTCAATTTCAAAAGTAGG
GATTCTGATTTATTTGCCTCGGATTCATATAGAAAGTGCAAACAGAA