Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0084g00660.t01
CDS Infomation

cds chromosome:12X:13:19780668:19805654:-1 gene:VIT_13s0084g00660 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAGTATAGCAGTGAGGGCTGGTGCAGACGATGAAAAGGAAGCAGCCAGCGGGATG
CCGAGCTTCGATCCTCAATTACCTGTTTCGAATGCACTTTGTACAGAGGGGAACTCCATC
CATTCTTATCGAGTTTCTGACTTTGGGACACTTGAGCAATCCATTGGGTTTCATTTAGAG
GATGCTGTGGACCTGAGTGGAAGCACTGCATTCAATTCGACAAAACCAAGTGGTCGAGCA
GTTACTTCTGATCCCCTCCATAGTGTCACTTTTGATAAGTCACAAAATTCATTTGATATA
AATCCATCTGCTGCCCGGGTGGAGTCTCAGAGGTTGCCATTGCAAAAGGGTCAACAATCA
AACCTGGTTTCTATATCTAGTGGTAGTGTAGAGAACTGGGGAGAGTCTGCAATGGCAGAT
GCCAGTCCTAGGACTGATATCTCGACAGACGTGGATACAGATGATAAAGTTCAGAGGTTT
GAAAGGGGTCAACCTGCTTCCAATATGGCTTCTGATTCCAGCGACAGATCAAAGGATAAA
AATGATCAGAAGACTCTTCGTAGGCTTGCTCAAAATCGTGAAGCTGCACGAAAAAGCCGA
TTGAGAAAGAAAGCATATGTCCAACAGCTAGAAAGTAGCCGGATGAAGCTGACCCAACTA
GAGCAGGAGCTCCAGCGAGCGCGACAGCAGGGTATTTTTATTTCAAGCTCAGGAGATCAA
GCCCATTCAATGAGTGGAAATGGGGCCATGGCATTTGATGTAGAATATGCTAGGTGGCTG
GAAGAGCAGAACCGACAAATCAACGAACTGAGATCAGCGGTCAATTCTCATGCAAGCGAT
GCTGAACTTCGTGTTATTGTTGATAATATCATGGCACACTATGATGACATATTCAGGCTG
AAGGGCGTTGCAGCCAAGGCTGATGTTTTCCATTTATTATCAGGCATGTGGAAAACACCT
GCAGAGAGGTGTTTTTTGTGGCTTGGTGGTTTCCGTTCATCTGAACTCCTAAAGCTGCTT
GTGAATCAGTTGGAGCCTCTGACCGAACAGCAACTGTTGGGCATCGGAAACTTGCAACAG
TCCTCCCAACAGGCAGAGGATGCATTATCACAAGGAATGGAAGCATTGCAGCAGTCCCTG
GCTGAGACTCTGTCCAGTGGTTCTCTTGGCTCTTCTGGTTCATCTGGAAATGTGGCAAAC
TATATGGGTCAAATGGCCATGGCCATGGGAAAGCTGGGGACTCTTGAGGGGTTTATTCGT
CAGGCTGACAATCTACGACAACAAACGCTACAACAGATGCACCGCATACTGACAACCCGC
CAGTCAGCTCGTGCGCTCCTTGCTATACATGACTACTTCTCCCGACTCCGTGCTCTGAGT
TCTCTCTGGCTGGCACGTCCAAGAGAGTGA

Peptide Sequence

PEP ID

VIT_13s0084g00660.t01
PEP Infomation

pep chromosome:12X:13:19780668:19805654:-1 gene:VIT_13s0084g00660 transcript:VIT_13s0084g00660.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSIAVRAGADDEKEAASGMPSFDPQLPVSNALCTEGNSIHSYRVSDFGTLEQSIGFHLE
DAVDLSGSTAFNSTKPSGRAVTSDPLHSVTFDKSQNSFDINPSAARVESQRLPLQKGQQS
NLVSISSGSVENWGESAMADASPRTDISTDVDTDDKVQRFERGQPASNMASDSSDRSKDK
NDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQELQRARQQGIFISSSGDQ
AHSMSGNGAMAFDVEYARWLEEQNRQINELRSAVNSHASDAELRVIVDNIMAHYDDIFRL
KGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLLGIGNLQQ
SSQQAEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIR
QADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRE

Transcript Sequence

Transcript ID

VIT_13s0084g00660.t01
Transcript Infomation

cdna chromosome:12X:13:19780668:19805654:-1 gene:VIT_13s0084g00660 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCACAATTCAACACTCAAAAGTAACAAAATCATCATAATCTCAGGTTTTTCTTCTGGGTT
TAGGGTTTTCTGAGGAACCAAGGAGGTGATGATGGTGATTCATGGGGAGTATAGCAGTGA
GGGCTGGTGCAGACGATGAAAAGGAAGCAGCCAGCGGGATGCCGAGCTTCGATCCTCAAT
TACCTGTTTCGAATGCACTTTGTACAGAGGGGAACTCCATCCATTCTTATCGAGTTTCTG
ACTTTGGGACACTTGAGCAATCCATTGGGTTTCATTTAGAGGATGCTGTGGACCTGAGTG
GAAGCACTGCATTCAATTCGACAAAACCAAGTGGTCGAGCAGTTACTTCTGATCCCCTCC
ATAGTGTCACTTTTGATAAGTCACAAAATTCATTTGATATAAATCCATCTGCTGCCCGGG
TGGAGTCTCAGAGGTTGCCATTGCAAAAGGGTCAACAATCAAACCTGGTTTCTATATCTA
GTGGTAGTGTAGAGAACTGGGGAGAGTCTGCAATGGCAGATGCCAGTCCTAGGACTGATA
TCTCGACAGACGTGGATACAGATGATAAAGTTCAGAGGTTTGAAAGGGGTCAACCTGCTT
CCAATATGGCTTCTGATTCCAGCGACAGATCAAAGGATAAAAATGATCAGAAGACTCTTC
GTAGGCTTGCTCAAAATCGTGAAGCTGCACGAAAAAGCCGATTGAGAAAGAAAGCATATG
TCCAACAGCTAGAAAGTAGCCGGATGAAGCTGACCCAACTAGAGCAGGAGCTCCAGCGAG
CGCGACAGCAGGGTATTTTTATTTCAAGCTCAGGAGATCAAGCCCATTCAATGAGTGGAA
ATGGGGCCATGGCATTTGATGTAGAATATGCTAGGTGGCTGGAAGAGCAGAACCGACAAA
TCAACGAACTGAGATCAGCGGTCAATTCTCATGCAAGCGATGCTGAACTTCGTGTTATTG
TTGATAATATCATGGCACACTATGATGACATATTCAGGCTGAAGGGCGTTGCAGCCAAGG
CTGATGTTTTCCATTTATTATCAGGCATGTGGAAAACACCTGCAGAGAGGTGTTTTTTGT
GGCTTGGTGGTTTCCGTTCATCTGAACTCCTAAAGCTGCTTGTGAATCAGTTGGAGCCTC
TGACCGAACAGCAACTGTTGGGCATCGGAAACTTGCAACAGTCCTCCCAACAGGCAGAGG
ATGCATTATCACAAGGAATGGAAGCATTGCAGCAGTCCCTGGCTGAGACTCTGTCCAGTG
GTTCTCTTGGCTCTTCTGGTTCATCTGGAAATGTGGCAAACTATATGGGTCAAATGGCCA
TGGCCATGGGAAAGCTGGGGACTCTTGAGGGGTTTATTCGTCAGGCTGACAATCTACGAC
AACAAACGCTACAACAGATGCACCGCATACTGACAACCCGCCAGTCAGCTCGTGCGCTCC
TTGCTATACATGACTACTTCTCCCGACTCCGTGCTCTGAGTTCTCTCTGGCTGGCACGTC
CAAGAGAGTGAAGTCAAAGCTTGACATCTTCTGGAAAATCTACCTTCTAAAGTAACTTAT
GGAGCCCAACATTGTGAATGCTGGGTCTCTGTATGGTCTTTGTCATCTTTATGTTTTATT
TTTCAAATCAATGGTGTTGTAGTTTCAGATTTCTGTGTATCCAGTGAAACTTTGTATCAT
GTATGCTGCACATAAGTCCTCGTACAGTCACAGACTCTGCCTTTGGCCTTTGCCTCTTTC
CCCTAGAAATGTTATTTGCAATAATATTCATATATTTATGTTCATTATTATTAGCTTC