Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0084g00090.t01
CDS Infomation

cds chromosome:12X:13:18659451:18661710:-1 gene:VIT_13s0084g00090 gene_biotype:protein_coding transcript_biotype:protein_coding description:WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F6HVA1]
Sequence

ATGGAATTGAAGAGATGCTGTGGCGGCTTTTTACACTCCAGCAAACCTTACTTGGCCATG
ATCTCCCTGCAGTTTGGATATGCAGGGATGAATATTATCACTAAGGTTTCTCTCAACCAT
GGGATGAGCCACTATGTTCTGGTGGTTTACAGGCATGCCTTTGCCACTGCCGTGATTGCG
CCTTTTGCTATCTTCCTTGAGAGGAAGGCGCAACCAAAGATAACATTCCGCGTTTTCATG
CAAATATTTGTTTTGGCTCTTCTTGGGCCTGTGATCGACCAGAACTTTTATTATGCTGGT
TTGAAGCTGACTTCCCCGACCTTCTCATGCGCAATGAGCAATATGCTTCCGGCCATGACA
TTCGTCATGGCGGTCATATTCCGAATGGAGAAAATAGACATGAAGAGAGTAAGGTGCCAA
GCAAAGGTTGTTGGGACTATTGTGACAGTGGCTGGGGCAATGGTGATGACCTTGTACAAG
GGACCCATCATGGAGATGGTGTGGACTAAGCACATGCATACTTCCAAATCGGTGGGTTCG
GGCACCACTTCTACCGACAAAGACTGGTTCATGGGGTCAATCTTCGTCATCATTGCAACA
CTTGCCTGGGCTTCTTTGTTCGTTTTACAGGCGCATGCATTGAAGACATACAAGCACCAT
CAGCTCTCTCTCACTACCCTTATTTGCTTTATTGGCACTCTACAAGCCATTGCTGTCACC
TTTGTTATGGAACATAAAACCTCTGTTTGGACAATTGGCTGGGACATGAATCTCCTTGCA
GCTGCCTATGCGGGTATTGTGACATCAAGTATTTCATACTATGTCCAAGGATTGGTGATA
AAGTCAAGAGGCCCTGTGTTTGCTACTGCTTTTAGCCCTTTGATGATGATCATTGTAGCC
ATCATGGGCTCCTTCATCCTCGCAGAAAAGATATTCCTTGGAGGTGTTCTTGGGGCCATC
TTGATTGTTGCTGGCCTTTACTCAGTTCTATGGGGAAAGTACAAGGAGAACTTGGAGAAG
AAGCAGGAGGAGGAGATACCCGAAGCCATAAAAGGCGCTCAGGGCAACGGCAATGGGCTG
TCTATAATCGACGACATCCAAACAAATGATATTGAAATGCAGAAAGCAGAAGCTAAGAAG
CTCTCTTCTGTCGCCATTAGCATGCCAATTCCAGAACCTCCTATGAAGGCAAACCAAGAC
CCAAAAGCCTAA

Peptide Sequence

PEP ID

VIT_13s0084g00090.t01
PEP Infomation

pep chromosome:12X:13:18659451:18661710:-1 gene:VIT_13s0084g00090 transcript:VIT_13s0084g00090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F6HVA1]
Sequence

MELKRCCGGFLHSSKPYLAMISLQFGYAGMNIITKVSLNHGMSHYVLVVYRHAFATAVIA
PFAIFLERKAQPKITFRVFMQIFVLALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMT
FVMAVIFRMEKIDMKRVRCQAKVVGTIVTVAGAMVMTLYKGPIMEMVWTKHMHTSKSVGS
GTTSTDKDWFMGSIFVIIATLAWASLFVLQAHALKTYKHHQLSLTTLICFIGTLQAIAVT
FVMEHKTSVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVIKSRGPVFATAFSPLMMIIVA
IMGSFILAEKIFLGGVLGAILIVAGLYSVLWGKYKENLEKKQEEEIPEAIKGAQGNGNGL
SIIDDIQTNDIEMQKAEAKKLSSVAISMPIPEPPMKANQDPKA

Transcript Sequence

Transcript ID

VIT_13s0084g00090.t01
Transcript Infomation

cdna chromosome:12X:13:18659451:18661710:-1 gene:VIT_13s0084g00090 gene_biotype:protein_coding transcript_biotype:protein_coding description:WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F6HVA1]
Sequence

AACCTCAGGTCCTCATCCACCCACATTAGTTTCTTCTTCCTCCTGCCCAGCCCACGCTTT
CTTTCATTTTCTTTCCCAAGAAAATGGAATTGAAGAGATGCTGTGGCGGCTTTTTACACT
CCAGCAAACCTTACTTGGCCATGATCTCCCTGCAGTTTGGATATGCAGGGATGAATATTA
TCACTAAGGTTTCTCTCAACCATGGGATGAGCCACTATGTTCTGGTGGTTTACAGGCATG
CCTTTGCCACTGCCGTGATTGCGCCTTTTGCTATCTTCCTTGAGAGGAAGGCGCAACCAA
AGATAACATTCCGCGTTTTCATGCAAATATTTGTTTTGGCTCTTCTTGGGCCTGTGATCG
ACCAGAACTTTTATTATGCTGGTTTGAAGCTGACTTCCCCGACCTTCTCATGCGCAATGA
GCAATATGCTTCCGGCCATGACATTCGTCATGGCGGTCATATTCCGAATGGAGAAAATAG
ACATGAAGAGAGTAAGGTGCCAAGCAAAGGTTGTTGGGACTATTGTGACAGTGGCTGGGG
CAATGGTGATGACCTTGTACAAGGGACCCATCATGGAGATGGTGTGGACTAAGCACATGC
ATACTTCCAAATCGGTGGGTTCGGGCACCACTTCTACCGACAAAGACTGGTTCATGGGGT
CAATCTTCGTCATCATTGCAACACTTGCCTGGGCTTCTTTGTTCGTTTTACAGGCGCATG
CATTGAAGACATACAAGCACCATCAGCTCTCTCTCACTACCCTTATTTGCTTTATTGGCA
CTCTACAAGCCATTGCTGTCACCTTTGTTATGGAACATAAAACCTCTGTTTGGACAATTG
GCTGGGACATGAATCTCCTTGCAGCTGCCTATGCGGGTATTGTGACATCAAGTATTTCAT
ACTATGTCCAAGGATTGGTGATAAAGTCAAGAGGCCCTGTGTTTGCTACTGCTTTTAGCC
CTTTGATGATGATCATTGTAGCCATCATGGGCTCCTTCATCCTCGCAGAAAAGATATTCC
TTGGAGGTGTTCTTGGGGCCATCTTGATTGTTGCTGGCCTTTACTCAGTTCTATGGGGAA
AGTACAAGGAGAACTTGGAGAAGAAGCAGGAGGAGGAGATACCCGAAGCCATAAAAGGCG
CTCAGGGCAACGGCAATGGGCTGTCTATAATCGACGACATCCAAACAAATGATATTGAAA
TGCAGAAAGCAGAAGCTAAGAAGCTCTCTTCTGTCGCCATTAGCATGCCAATTCCAGAAC
CTCCTATGAAGGCAAACCAAGACCCAAAAGCCTAATCACAGTGGAAGCTTTTTTGTCTTT
CCATCTTTTCTTTTCTTTTTTTCCTTTTTTCTTTTCTGAATTATGAAAGAGTTATGGGGC
TTTGCTGTGCTATATGCATGTAAGTTAATATACTAAAAGGCTTTGACTGAGTGGCATTAA
AATGAATCCCAGAATCTCTTTTCTC