Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0084g00080.t01
CDS Infomation

cds chromosome:12X:13:18624369:18644420:1 gene:VIT_13s0084g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACGACCATTAGAACGCCGCCGTTTTCACCCTCCCAAACCACTTGCGGATCTCTCCTT
GTCGAGTTGCAGAAAATATGGGATGAAATTGGGGAGAGTGAAAGTGAAAGAGATAAGATG
CTTCTGCAACTTGAGCAAGAATGCCTTGATATCTATAGAAGGAAGGTTGAAAAAACTAAG
AAGCACAGGGCTGATCTGTGTCAAACACTCAATGAAGCTGAAACTGAAGTTTCTAGCCTT
GTTTCTGCTCTAGGTGAACATGCGAACTTTGTTCAGAAGGAAAAAGGCACTCTCCATGAG
CAATTATCTGCCATAAAACCTGTATTGGAAGACTTGAGAATGAAGAAGCAAGAAAGAATG
AAGGAATTTTCTGAAACCCAGTCTCAGATTGTTCGGATATGTGCAGAAATAGCAGGCAAT
ATTCAGTCCATCAATTCTGTTAATGCACAAGTAAATGAGAGGGATTTGACAATGAAAAAG
TTGGGTGGGCTGAAGTCATACCTACAAGAGCTTCAGAGTGAAAAGATTCTTCGTTTGCAG
AAAGTCAATAGCCATGTTAATACCATTCATGAACTGTCAGTTGTAATGTCAATTGATTTT
GTCAAGACAATAATTGAAGTTCATCCAACCCTGGTTGATCCTTCACATGGACAAATGAGG
AGTATTAGCAATGACACCCTTGCTCGATTAACAGGCATGATTCATTCACTGAAGGAAGAG
AAACTACAAAGGCTTCAAAAGCTTCAAGATCTTGGGAGCACGCTTATGGAACTATGGAAT
CTCTTGGACACATCTGTTGATGAACAAAAACAATTTAAGCATGTTACTTGCTTAATTTCT
TCTTCCATTGATGAGGTTGTAAGGCAAGGGTGCCTTGCTCTAGATGTCATTGAGCAGACT
GAGGTTGAAATTGAGCGATTGAAAGTTTTAAAAGCCAGCAAGATGAAGGAGCTGGTACTC
AAGAGGCAAAATGAGCTTGAAGAAATTTACAGAGGGGTTCATATGGATTTGGATACTGAT
GCAGCAAGACAAACACTTGTCAGCCTTATAGATTCTGGAAATGTTGATCTGTCTGATTTG
CTTTCTGGAATCGATGACCAGATTGTAAAGGCTAAAGAGCAAGCTCTAAGCAGGAAGGAT
ATTTTGGACAAGGTGGAGAAATGGAAATATGCATCGGATGAGGAAAACTGGCTTGATGAC
TATGAGAGGGATGAAAACCGGTATAGTGCTGGCAGGGGAGCACATAAAAATCTGAAACGG
GCAGAGAAGGCACGGATTCTAGTCAGCAAGATACCATCAATTGTTGAAAATTTGACTGCA
AAAGTGAAAGCCTGGGAAATGGAGAAAGGAATGCCATTCTTTTATGACAAGGTCCCCTTG
TTACAAACCTTGGAGGAATATATTGTGCTGAGGCAGGAAAGGGAAGAAGAAAAACGTAGA
TCTCGGGAGCAGAAACGGTTACAAGAACAATTTGCTACAGAGCAAGAGGCTTTATTCGGG
TCTAAGCCCACAACAAAAAAGCCACTGGGCCAAAGCACCAATGCTAACACACTGGCAGGA
ACACCAGTCGGCCGCCGTGTTTCGACTCCTTCATCCCGTCATGGGGTTTCAGCGGGTAAA
GAACGGAGGGATAGTGGCAGGGGAGGTACCACAATACCTCCAAACTATGTTGCTCTGCCA
AAAGGATGA

Peptide Sequence

PEP ID

VIT_13s0084g00080.t01
PEP Infomation

pep chromosome:12X:13:18624369:18644420:1 gene:VIT_13s0084g00080 transcript:VIT_13s0084g00080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTTIRTPPFSPSQTTCGSLLVELQKIWDEIGESESERDKMLLQLEQECLDIYRRKVEKTK
KHRADLCQTLNEAETEVSSLVSALGEHANFVQKEKGTLHEQLSAIKPVLEDLRMKKQERM
KEFSETQSQIVRICAEIAGNIQSINSVNAQVNERDLTMKKLGGLKSYLQELQSEKILRLQ
KVNSHVNTIHELSVVMSIDFVKTIIEVHPTLVDPSHGQMRSISNDTLARLTGMIHSLKEE
KLQRLQKLQDLGSTLMELWNLLDTSVDEQKQFKHVTCLISSSIDEVVRQGCLALDVIEQT
EVEIERLKVLKASKMKELVLKRQNELEEIYRGVHMDLDTDAARQTLVSLIDSGNVDLSDL
LSGIDDQIVKAKEQALSRKDILDKVEKWKYASDEENWLDDYERDENRYSAGRGAHKNLKR
AEKARILVSKIPSIVENLTAKVKAWEMEKGMPFFYDKVPLLQTLEEYIVLRQEREEEKRR
SREQKRLQEQFATEQEALFGSKPTTKKPLGQSTNANTLAGTPVGRRVSTPSSRHGVSAGK
ERRDSGRGGTTIPPNYVALPKG

Transcript Sequence

Transcript ID

VIT_13s0084g00080.t01
Transcript Infomation

cdna chromosome:12X:13:18624369:18644420:1 gene:VIT_13s0084g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCCAAAATGGAACATAATGGAATGTAGATCAAAATCACGCTGTTGCTGATTTCTAGGTTT
TCGAGAAATGACGACCATTAGAACGCCGCCGTTTTCACCCTCCCAAACCACTTGCGGATC
TCTCCTTGTCGAGTTGCAGAAAATATGGGATGAAATTGGGGAGAGTGAAAGTGAAAGAGA
TAAGATGCTTCTGCAACTTGAGCAAGAATGCCTTGATATCTATAGAAGGAAGGTTGAAAA
AACTAAGAAGCACAGGGCTGATCTGTGTCAAACACTCAATGAAGCTGAAACTGAAGTTTC
TAGCCTTGTTTCTGCTCTAGGTGAACATGCGAACTTTGTTCAGAAGGAAAAAGGCACTCT
CCATGAGCAATTATCTGCCATAAAACCTGTATTGGAAGACTTGAGAATGAAGAAGCAAGA
AAGAATGAAGGAATTTTCTGAAACCCAGTCTCAGATTGTTCGGATATGTGCAGAAATAGC
AGGCAATATTCAGTCCATCAATTCTGTTAATGCACAAGTAAATGAGAGGGATTTGACAAT
GAAAAAGTTGGGTGGGCTGAAGTCATACCTACAAGAGCTTCAGAGTGAAAAGATTCTTCG
TTTGCAGAAAGTCAATAGCCATGTTAATACCATTCATGAACTGTCAGTTGTAATGTCAAT
TGATTTTGTCAAGACAATAATTGAAGTTCATCCAACCCTGGTTGATCCTTCACATGGACA
AATGAGGAGTATTAGCAATGACACCCTTGCTCGATTAACAGGCATGATTCATTCACTGAA
GGAAGAGAAACTACAAAGGCTTCAAAAGCTTCAAGATCTTGGGAGCACGCTTATGGAACT
ATGGAATCTCTTGGACACATCTGTTGATGAACAAAAACAATTTAAGCATGTTACTTGCTT
AATTTCTTCTTCCATTGATGAGGTTGTAAGGCAAGGGTGCCTTGCTCTAGATGTCATTGA
GCAGACTGAGGTTGAAATTGAGCGATTGAAAGTTTTAAAAGCCAGCAAGATGAAGGAGCT
GGTACTCAAGAGGCAAAATGAGCTTGAAGAAATTTACAGAGGGGTTCATATGGATTTGGA
TACTGATGCAGCAAGACAAACACTTGTCAGCCTTATAGATTCTGGAAATGTTGATCTGTC
TGATTTGCTTTCTGGAATCGATGACCAGATTGTAAAGGCTAAAGAGCAAGCTCTAAGCAG
GAAGGATATTTTGGACAAGGTGGAGAAATGGAAATATGCATCGGATGAGGAAAACTGGCT
TGATGACTATGAGAGGGATGAAAACCGGTATAGTGCTGGCAGGGGAGCACATAAAAATCT
GAAACGGGCAGAGAAGGCACGGATTCTAGTCAGCAAGATACCATCAATTGTTGAAAATTT
GACTGCAAAAGTGAAAGCCTGGGAAATGGAGAAAGGAATGCCATTCTTTTATGACAAGGT
CCCCTTGTTACAAACCTTGGAGGAATATATTGTGCTGAGGCAGGAAAGGGAAGAAGAAAA
ACGTAGATCTCGGGAGCAGAAACGGTTACAAGAACAATTTGCTACAGAGCAAGAGGCTTT
ATTCGGGTCTAAGCCCACAACAAAAAAGCCACTGGGCCAAAGCACCAATGCTAACACACT
GGCAGGAACACCAGTCGGCCGCCGTGTTTCGACTCCTTCATCCCGTCATGGGGTTTCAGC
GGGTAAAGAACGGAGGGATAGTGGCAGGGGAGGTACCACAATACCTCCAAACTATGTTGC
TCTGCCAAAAGGATGA