Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0084g00070.t01
CDS Infomation

cds chromosome:12X:13:18585490:18604173:1 gene:VIT_13s0084g00070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCTCATGTCAATCTCCCGGCACTCCCCTCCCCTCCCCATCCTGCCATTCCCGAGAT
AATTCGCGCTTTCTCCGAGACTACGCCGCCACCCAGATCAACGCCTTCCTCTGGATCTCC
CTCATCGCTGTCACCCTTCTTCTGCTCAGGAAACTCTTCAAGCTCTTTGCTTTGTGGGCT
AAAGGGAGCAGGATATCCGGCCTTCCCTGCCCTTCTTTCTACGGCCACTCCAAGCTTATT
TCCGAAACTAATCTCACTGGCCTTTTATCGGAGTCGCACAACAAATATGGATCAGTTGTG
AAGCTGTGGTTAGGTCCTACCCAGCTTCTAGTGTCAATAAAGGATCCTGTGCTTATTAAA
GAGATGCTCTTAAAGGCAGAGGATAAATTGCCTCTGACAGGGAGGGCTTTCCAATTAGCC
TTTGGACCATCGAGTCTCTTTTCTTCCTCTTTTGACAAGGTACAAAAGAGAAGGGAATTG
TTGGCTGCAGAATTAAATGGGTACTTGCTCCAGAGAGCAAATGTGATTTCTACAAAAGTT
GTAGACCACGTCATGGAAAAATTACATGCTATAATGGGCAAAGGCACCCTTGATTGTAAA
ATTGTTTCTCAGCATATGGCTTTTTCCATCATGGGTGCCACACTTTTCGGAGATGCATTC
TTAGCCTGGTCCAAGGCAAGTGTTTACGAAGAGCTTCTCATGATGATTGCTAAAGATGCT
TGCTTTTGGGCCTCGTATGGTGTTACTCCCTTCTGGAAACAGGGATTTTGGAGGTATCAG
CGGTTGTGCATGAAGTTGAAGAGCTTAACTCAAGATGGTATCGAACAATGCAGACAAAAT
TACAAGCTTTTTAGTCATATGGATAAAAACTCCAATAGTGAAATCTCAAATCCAGAAACA
AAGAATGCACCAGAGGCACCATTTTCTTCTGGCATTTTGATGCCTGATAACTTATCATCG
CAAGAGTGTAATGGCCACGTTAATGCAAGAGAAGAGCCTTGTGGAAATATTATGCGTGTA
ATGTTTCATGGGTGTCTTACTACAGCAGGGTTGATTGGTAACATCTTAGCTAGGCTTGCA
ACACATCCAGAAATACAGGATAAGATTTACTCAGAGATAATCATGTCTCGGAAAGGGGCA
CAGAAGCAAAAACAACAAAATGTTGATAAGATGCTTGTTTTGTTGGCCACTGTATATGAA
TCTGCCCGCCTTATGCCGGCTGGACCTTTGTTACAAAGATGCTCTCTAAAACATGACTTA
AATCTGAAAACTGGCTTAACCATACCAGCTGGAGCAATACTTGTTGTTCCTGTACAGTTG
GTACAGATGGATGATTCTTGTTGGGGGAATGACGCTAGGCAGTTTAATCCATATCGATTT
TTGTCTAAAGCTGTGAAGGGACCTGAATTAGCGCACATCTCGTCTTTAGCAGGGACTGTA
GAAGATCTTGTGGATCCAGATCAGGACTCATGCATTTTGGATGACCCAAATCACAATGCT
GCCTTTCTTCCCTTTGGTTCTGGGACACGAGCATGTGTTGGCCAGAAATTTGTAATTCTT
GGAGTTGCCGCCTTATTTGCATCTTTGCTTGAACACTACGAGATAAGGCTTCAGCCAGGA
TCTGAGGATGACCCCAAGCCAACGTTGAATGACAGTGTTCTTCAGCTCCTTCCTAGTCCA
AAGATAGTATTTATGAAGAGGAACAGCCGAGAATAA

Peptide Sequence

PEP ID

VIT_13s0084g00070.t01
PEP Infomation

pep chromosome:12X:13:18585490:18604173:1 gene:VIT_13s0084g00070 transcript:VIT_13s0084g00070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSCQSPGTPLPSPSCHSRDNSRFLRDYAATQINAFLWISLIAVTLLLLRKLFKLFALWA
KGSRISGLPCPSFYGHSKLISETNLTGLLSESHNKYGSVVKLWLGPTQLLVSIKDPVLIK
EMLLKAEDKLPLTGRAFQLAFGPSSLFSSSFDKVQKRRELLAAELNGYLLQRANVISTKV
VDHVMEKLHAIMGKGTLDCKIVSQHMAFSIMGATLFGDAFLAWSKASVYEELLMMIAKDA
CFWASYGVTPFWKQGFWRYQRLCMKLKSLTQDGIEQCRQNYKLFSHMDKNSNSEISNPET
KNAPEAPFSSGILMPDNLSSQECNGHVNAREEPCGNIMRVMFHGCLTTAGLIGNILARLA
THPEIQDKIYSEIIMSRKGAQKQKQQNVDKMLVLLATVYESARLMPAGPLLQRCSLKHDL
NLKTGLTIPAGAILVVPVQLVQMDDSCWGNDARQFNPYRFLSKAVKGPELAHISSLAGTV
EDLVDPDQDSCILDDPNHNAAFLPFGSGTRACVGQKFVILGVAALFASLLEHYEIRLQPG
SEDDPKPTLNDSVLQLLPSPKIVFMKRNSRE

Transcript Sequence

Transcript ID

VIT_13s0084g00070.t01
Transcript Infomation

cdna chromosome:12X:13:18585490:18604173:1 gene:VIT_13s0084g00070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACAACTCTCCTCTATTTTCCCATTTCCCCATCTCACATGCCTCCTGTTTTTCCCGGCAG
CCAAACATGTCCTCATGTCAATCTCCCGGCACTCCCCTCCCCTCCCCATCCTGCCATTCC
CGAGATAATTCGCGCTTTCTCCGAGACTACGCCGCCACCCAGATCAACGCCTTCCTCTGG
ATCTCCCTCATCGCTGTCACCCTTCTTCTGCTCAGGAAACTCTTCAAGCTCTTTGCTTTG
TGGGCTAAAGGGAGCAGGATATCCGGCCTTCCCTGCCCTTCTTTCTACGGCCACTCCAAG
CTTATTTCCGAAACTAATCTCACTGGCCTTTTATCGGAGTCGCACAACAAATATGGATCA
GTTGTGAAGCTGTGGTTAGGTCCTACCCAGCTTCTAGTGTCAATAAAGGATCCTGTGCTT
ATTAAAGAGATGCTCTTAAAGGCAGAGGATAAATTGCCTCTGACAGGGAGGGCTTTCCAA
TTAGCCTTTGGACCATCGAGTCTCTTTTCTTCCTCTTTTGACAAGGTACAAAAGAGAAGG
GAATTGTTGGCTGCAGAATTAAATGGGTACTTGCTCCAGAGAGCAAATGTGATTTCTACA
AAAGTTGTAGACCACGTCATGGAAAAATTACATGCTATAATGGGCAAAGGCACCCTTGAT
TGTAAAATTGTTTCTCAGCATATGGCTTTTTCCATCATGGGTGCCACACTTTTCGGAGAT
GCATTCTTAGCCTGGTCCAAGGCAAGTGTTTACGAAGAGCTTCTCATGATGATTGCTAAA
GATGCTTGCTTTTGGGCCTCGTATGGTGTTACTCCCTTCTGGAAACAGGGATTTTGGAGG
TATCAGCGGTTGTGCATGAAGTTGAAGAGCTTAACTCAAGATGGTATCGAACAATGCAGA
CAAAATTACAAGCTTTTTAGTCATATGGATAAAAACTCCAATAGTGAAATCTCAAATCCA
GAAACAAAGAATGCACCAGAGGCACCATTTTCTTCTGGCATTTTGATGCCTGATAACTTA
TCATCGCAAGAGTGTAATGGCCACGTTAATGCAAGAGAAGAGCCTTGTGGAAATATTATG
CGTGTAATGTTTCATGGGTGTCTTACTACAGCAGGGTTGATTGGTAACATCTTAGCTAGG
CTTGCAACACATCCAGAAATACAGGATAAGATTTACTCAGAGATAATCATGTCTCGGAAA
GGGGCACAGAAGCAAAAACAACAAAATGTTGATAAGATGCTTGTTTTGTTGGCCACTGTA
TATGAATCTGCCCGCCTTATGCCGGCTGGACCTTTGTTACAAAGATGCTCTCTAAAACAT
GACTTAAATCTGAAAACTGGCTTAACCATACCAGCTGGAGCAATACTTGTTGTTCCTGTA
CAGTTGGTACAGATGGATGATTCTTGTTGGGGGAATGACGCTAGGCAGTTTAATCCATAT
CGATTTTTGTCTAAAGCTGTGAAGGGACCTGAATTAGCGCACATCTCGTCTTTAGCAGGG
ACTGTAGAAGATCTTGTGGATCCAGATCAGGACTCATGCATTTTGGATGACCCAAATCAC
AATGCTGCCTTTCTTCCCTTTGGTTCTGGGACACGAGCATGTGTTGGCCAGAAATTTGTA
ATTCTTGGAGTTGCCGCCTTATTTGCATCTTTGCTTGAACACTACGAGATAAGGCTTCAG
CCAGGATCTGAGGATGACCCCAAGCCAACGTTGAATGACAGTGTTCTTCAGCTCCTTCCT
AGTCCAAAGATAGTATTTATGAAGAGGAACAGCCGAGAATAAAAGAAGATGAAATCATCA
TGTGTGGATAATAATTTCCATGTTATTTTCTCCGTTTTAATCAGAGGTCATAGATGGAAC
GACAACCTTTCAAATTCCCTTTTTTCAGTCAAAGTTGATGGGGGAGAGTGTTTCCTTTCT
CCTTTTTTAGCTTATGAAGCTGGCAAAGTGGAGGATGCTACATGAGTGTGTTTGGAAACC
TTATGTTTTTTCCTCCCTGTTTTTAAATGGCTCTAGCTGCTGTCTTTTATGCCATGAGTG
ATTCTTGATTTGCTTTTCAGGCACCATGGCCTTCTTGTAGCAGCTAGGCCTCATGTTTTT
CTTCCCCATCTTCCAATCTGTAACTTTTTCGCTTTGTTCTCCGTACTTTTTTTTCTCCAG
AAGGGAGTTTTATGTAGAATTTGATGCTCATGCTCAAGAAATAATGTATACAAATAATAT
AATATGTTGCTTCAGTACTTCAACATACTACTGAAATGATTCCAATGGTTTC