Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0084g00010.t01
CDS Infomation

cds chromosome:12X:13:18481884:18484546:1 gene:VIT_13s0084g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTGGCAACAGCACTTGCGAGGAAATCATTGTTCGGCGAACTGCAAACTACCATCCT
CCCATTTGGGACTATGATTATGTGCAGTCACTAAGAAGTGATTATGTGGGGGAAACATAC
ACCAGAAGACTTGATAAGCTAAAGAGAGATGTGAAGCCAATGCTTGGGAAAGTGAAGAAG
CCTTTGGATCAGCTGGAGCTAATCGATGTTTTGCAAAGGCTTGGACTCTTCAAGGATGAA
ATAAAGAGAATATTGGACAGCATATACAACCAGTACAATCAGCACGAAGAGTGGAAGAAA
GATGATTTATACGCAACAGCTCTTGAATTTAGACTGTTAAGGCAGCATGGCTATGATGTG
CCTGAAGATGTTTTTAGTAGATTCAAGGACGAAACAGGGAGCTTTAAGGCATGCCTGTGT
GAAGATATGAAGGGAATGCTCTGCTTGTACGAAGCTTCATACCTTTGTGTACAAGGAGAA
AGTACCTTGGAGCAGGCCAGAGATTTCGCACACAGACATCTTGGAAAGGGCCTTGAGCAC
AACATAGATCAAAATCTTGCCATTGAGGTGAACCATGCCTTAGAGCTTCCATTGCATTGG
AGAATGCCAAGGTTAGAGGCAAGGTGGTTCATAGACGTATACGAGAAAAGACAGGACATG
AATCCTATCTTGCTGGAGTTTGCTAAATTGGACTTCAATATGGTACAAGCCACACACCAG
GAGGATCTAAGACACATGTCAAGCTGGTGGAGGAGTACACGCCTGGGAGAAAAGTTGAAC
TTTGCTAGGGACAGGCTGATGGAGAATTTCCTATGGACTGTGGGAATGATATTCGAGCCT
CAGTATGGATATTGTAGGAGAATGTTAACGAAGCTTGGCACATTCGTAACAATAATTGAT
GATGTTTACGATGTTTATGGTACATTGGATGAACTTGAGCTTTTTACAGATGCTGTTGAC
AGGTGGGATATCAATGCAATGGATCCACTTCCAGAATACATGAAGTTGTGCTTCCTTGCT
CTCTACAACTCCACTAATGAAATGGCTTATGATGCTCTCAAGGAACATGGTTTACACATC
ATTTCCTATCTTAGAAAAGCGTGGTCAGACTTATGTAAATCTTACTTACTGGAGGCAAAG
TGGTACTACAGTGGATATAAACCAACCCTACAAGAATACATTAGCAATGCATGGATTTCG
ATATCAGGTCCTGTACTGCTAGTCCACTCCTATTTTTTTGTTGCAAATCCAATCACCGAG
GAGGCCTTGCAATCCTTAGAGAGATATCACAATATTATCCATTGGTCATCAATGATTTTA
AGGCTTTCAGATGATCTGGGAACATCACTGGATGAGTTGAAAAGAGGAGATGTTCCCAAG
TCAATCCAGTGTTACATGTATGAAACTGGTGCTTCTGAAGAAGACGCCCGTAAACACATA
AGCTATTTGATTGGAGAGACATGGAAGAAGCTAAATGAAGATCGAGCTGTAGAGTCTCCA
TTCCCTGAAACTTTTATTGGAATTGCAACGAATCTTGCTAGGATGGCCCAGTGCATGTAT
CAGCATGGAGATGGACATGGTATTGAATATGGTGAAACTAAGGATCGAGTGTTGTCATTA
CTCGTTGAGCCCGTTCCCAGTTTGAGTTCTGAATAA

Peptide Sequence

PEP ID

VIT_13s0084g00010.t01
PEP Infomation

pep chromosome:12X:13:18481884:18484546:1 gene:VIT_13s0084g00010 transcript:VIT_13s0084g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIGNSTCEEIIVRRTANYHPPIWDYDYVQSLRSDYVGETYTRRLDKLKRDVKPMLGKVKK
PLDQLELIDVLQRLGLFKDEIKRILDSIYNQYNQHEEWKKDDLYATALEFRLLRQHGYDV
PEDVFSRFKDETGSFKACLCEDMKGMLCLYEASYLCVQGESTLEQARDFAHRHLGKGLEH
NIDQNLAIEVNHALELPLHWRMPRLEARWFIDVYEKRQDMNPILLEFAKLDFNMVQATHQ
EDLRHMSSWWRSTRLGEKLNFARDRLMENFLWTVGMIFEPQYGYCRRMLTKLGTFVTIID
DVYDVYGTLDELELFTDAVDRWDINAMDPLPEYMKLCFLALYNSTNEMAYDALKEHGLHI
ISYLRKAWSDLCKSYLLEAKWYYSGYKPTLQEYISNAWISISGPVLLVHSYFFVANPITE
EALQSLERYHNIIHWSSMILRLSDDLGTSLDELKRGDVPKSIQCYMYETGASEEDARKHI
SYLIGETWKKLNEDRAVESPFPETFIGIATNLARMAQCMYQHGDGHGIEYGETKDRVLSL
LVEPVPSLSSE

Transcript Sequence

Transcript ID

VIT_13s0084g00010.t01
Transcript Infomation

cdna chromosome:12X:13:18481884:18484546:1 gene:VIT_13s0084g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTTGCTTCAATTCCTGATCTGATCACTCACACAAGACTTCCAATTATTAGAAGATCC
AGCAGTTGAAAGGCTTCTCCTCCAGGAAACCAATCCATGATTGGCAACAGCACTTGCGAG
GAAATCATTGTTCGGCGAACTGCAAACTACCATCCTCCCATTTGGGACTATGATTATGTG
CAGTCACTAAGAAGTGATTATGTGGGGGAAACATACACCAGAAGACTTGATAAGCTAAAG
AGAGATGTGAAGCCAATGCTTGGGAAAGTGAAGAAGCCTTTGGATCAGCTGGAGCTAATC
GATGTTTTGCAAAGGCTTGGACTCTTCAAGGATGAAATAAAGAGAATATTGGACAGCATA
TACAACCAGTACAATCAGCACGAAGAGTGGAAGAAAGATGATTTATACGCAACAGCTCTT
GAATTTAGACTGTTAAGGCAGCATGGCTATGATGTGCCTGAAGATGTTTTTAGTAGATTC
AAGGACGAAACAGGGAGCTTTAAGGCATGCCTGTGTGAAGATATGAAGGGAATGCTCTGC
TTGTACGAAGCTTCATACCTTTGTGTACAAGGAGAAAGTACCTTGGAGCAGGCCAGAGAT
TTCGCACACAGACATCTTGGAAAGGGCCTTGAGCACAACATAGATCAAAATCTTGCCATT
GAGGTGAACCATGCCTTAGAGCTTCCATTGCATTGGAGAATGCCAAGGTTAGAGGCAAGG
TGGTTCATAGACGTATACGAGAAAAGACAGGACATGAATCCTATCTTGCTGGAGTTTGCT
AAATTGGACTTCAATATGGTACAAGCCACACACCAGGAGGATCTAAGACACATGTCAAGC
TGGTGGAGGAGTACACGCCTGGGAGAAAAGTTGAACTTTGCTAGGGACAGGCTGATGGAG
AATTTCCTATGGACTGTGGGAATGATATTCGAGCCTCAGTATGGATATTGTAGGAGAATG
TTAACGAAGCTTGGCACATTCGTAACAATAATTGATGATGTTTACGATGTTTATGGTACA
TTGGATGAACTTGAGCTTTTTACAGATGCTGTTGACAGGTGGGATATCAATGCAATGGAT
CCACTTCCAGAATACATGAAGTTGTGCTTCCTTGCTCTCTACAACTCCACTAATGAAATG
GCTTATGATGCTCTCAAGGAACATGGTTTACACATCATTTCCTATCTTAGAAAAGCGTGG
TCAGACTTATGTAAATCTTACTTACTGGAGGCAAAGTGGTACTACAGTGGATATAAACCA
ACCCTACAAGAATACATTAGCAATGCATGGATTTCGATATCAGGTCCTGTACTGCTAGTC
CACTCCTATTTTTTTGTTGCAAATCCAATCACCGAGGAGGCCTTGCAATCCTTAGAGAGA
TATCACAATATTATCCATTGGTCATCAATGATTTTAAGGCTTTCAGATGATCTGGGAACA
TCACTGGATGAGTTGAAAAGAGGAGATGTTCCCAAGTCAATCCAGTGTTACATGTATGAA
ACTGGTGCTTCTGAAGAAGACGCCCGTAAACACATAAGCTATTTGATTGGAGAGACATGG
AAGAAGCTAAATGAAGATCGAGCTGTAGAGTCTCCATTCCCTGAAACTTTTATTGGAATT
GCAACGAATCTTGCTAGGATGGCCCAGTGCATGTATCAGCATGGAGATGGACATGGTATT
GAATATGGTGAAACTAAGGATCGAGTGTTGTCATTACTCGTTGAGCCCGTTCCCAGTTTG
AGTTCTGAATAATATGGAGAACCAACGTTGATCTTGAGTCATGGCAAATTCCTGTAGCCC
TGATGGATTAATATAATTGAAGGTCTTATAATTGGGGTTAAATGTAATTTTAGTACAAAT
AGTAGAGTGAAATTTTAACTTTTAGGTAGTTGAAGTGATGTTAGTATCTCAGTTATATTT
GGAGGGTTAATTAGGTATATAAATCAGTGACTTTTGA