Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0074g00390.t01
CDS Infomation

cds chromosome:12X:13:8019969:8021714:-1 gene:VIT_13s0074g00390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCCTGCTTTTGCTGCTGCTTCTTCGACTTATTCTCCTTACTACCACATCTTCTTC
ACTGCTTTAGCCTTCCTCATATCAGGTCTGATCGTCTTGCTGTCACGTAAAACCAAGTCA
AAGAAGCTAAACCTTCCTCCGGGACCCCCTGGTTGGCCTATTGTTGGAAACCTCTTCCAA
TTTGCTCGCTCTGGGAAGCAATTTTTTCAGTATGTGAGAGAGCTTAGGCCAAAATATGGC
CCAATTTTCACTTTGAAGATGGGGAATAGAACCATGATCATAATAAGCAGTGCAGAATTG
GCGCACGAAGCTCTCATCGAAAAGGGCCAGTCTTTCGCTAGCAGGCCTCGAGAAAACCCT
ACGCGCACCGTGTTCAGCTGCAACAAGTTCACGGTGAACGCTGCCGTCTACGGCCCTGTC
TGGCGGTCGCTGCGGAGGAACATGGTGCAAAACATGCTCAGTGCAAGCAAGATTAGGGAG
TTCAGCAATTTGAGAGATGTGTCCATGGATAAGCTCATTGACAGGCTACGGAGCGAGGCT
GAGGCTAATGATGGAGCTGTTTGGGTTCTGAAGAATGCTCGATTTGCTGTTTTTTGCATC
CTTTTGTCTATGTGTTTTGGAGTCGAAATGGATGAGGAGACCATTGAGGTGATGGATGAT
CTGATGAAAACTGTTCTAATCACTCTTGATCCAAGACTTGATGACTATCTCCCACTTCTA
AGCCCATTCTTCTCAAAGCAGAGGAAAGCCGCCACGGAAGTGCGGAAGAGGCAGATCAAA
ACTGTTGTCCCCTTCATCGAGAGGCGGCGTGCGGCGCTTGAAAACCCAGGATCAGATAAA
ACCGCGGCTTCATTTTCCTACCTCGACACGATCTTCGATCTCAAAATCGAGGGGCGTAAA
TCATCTCCAACCAACCCCGAGCTCGTCACACTCTGCTCCGAGTTCCTCAATGGCGGCACC
GACACAACAGGGACGGCGGTCGAGTGGGCAATTGCCCGAATGATCGAGAACCCCGAGATT
CAGTCAAAACTATACGAAGAGATCAAAACAACAGTGGGTGATCGTAAGGTTCAAGAGAAA
GACATGGAGAAGATGCCTTACCTAAACGCAGTTTCAAAAGAACTACTACGTAAACACCCT
CCCACCTACTTTTCCCTAACTCATGCAGTCACAGAGCCAGCGAAGTTGGCAGGCTACGAC
ATACCCACAGACGCAAATGTCGAGTTCTTCTTGCCACCCATCTCCGAGGACCCCAAGCTA
TGGAAGAATCCCGAAAAGTTCGACCCCGACCGCTTTTTCTTGGGCGGTGAAGACGCCGAT
ATAACCGGAGTGACCGGCGTAAAAATGATGCCATTCGGAGTAGGGCGAAGGATATGCCCT
GGTTTGAGCATGGCCACCGTGCATGTGAACCTAATGCTGGCAAGGATGGTGCAGGACTTC
GAGTGGAGCGCATACCCTGAAAACAGTAAGATTGATTTTAGTGAAAAGTTGGAATTCACA
GTGGTGATGAAGAACCCTCTAAGGGCCAAGATTAAGCCTAGGGTATGA

Peptide Sequence

PEP ID

VIT_13s0074g00390.t01
PEP Infomation

pep chromosome:12X:13:8019969:8021714:-1 gene:VIT_13s0074g00390 transcript:VIT_13s0074g00390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPAFAAASSTYSPYYHIFFTALAFLISGLIVLLSRKTKSKKLNLPPGPPGWPIVGNLFQ
FARSGKQFFQYVRELRPKYGPIFTLKMGNRTMIIISSAELAHEALIEKGQSFASRPRENP
TRTVFSCNKFTVNAAVYGPVWRSLRRNMVQNMLSASKIREFSNLRDVSMDKLIDRLRSEA
EANDGAVWVLKNARFAVFCILLSMCFGVEMDEETIEVMDDLMKTVLITLDPRLDDYLPLL
SPFFSKQRKAATEVRKRQIKTVVPFIERRRAALENPGSDKTAASFSYLDTIFDLKIEGRK
SSPTNPELVTLCSEFLNGGTDTTGTAVEWAIARMIENPEIQSKLYEEIKTTVGDRKVQEK
DMEKMPYLNAVSKELLRKHPPTYFSLTHAVTEPAKLAGYDIPTDANVEFFLPPISEDPKL
WKNPEKFDPDRFFLGGEDADITGVTGVKMMPFGVGRRICPGLSMATVHVNLMLARMVQDF
EWSAYPENSKIDFSEKLEFTVVMKNPLRAKIKPRV

Transcript Sequence

Transcript ID

VIT_13s0074g00390.t01
Transcript Infomation

cdna chromosome:12X:13:8019969:8021714:-1 gene:VIT_13s0074g00390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTTCTCTGTCTCAACACCATCTCCATGGCTCCTGCTTTTGCTGCTGCTTCTTCGACTTA
TTCTCCTTACTACCACATCTTCTTCACTGCTTTAGCCTTCCTCATATCAGGTCTGATCGT
CTTGCTGTCACGTAAAACCAAGTCAAAGAAGCTAAACCTTCCTCCGGGACCCCCTGGTTG
GCCTATTGTTGGAAACCTCTTCCAATTTGCTCGCTCTGGGAAGCAATTTTTTCAGTATGT
GAGAGAGCTTAGGCCAAAATATGGCCCAATTTTCACTTTGAAGATGGGGAATAGAACCAT
GATCATAATAAGCAGTGCAGAATTGGCGCACGAAGCTCTCATCGAAAAGGGCCAGTCTTT
CGCTAGCAGGCCTCGAGAAAACCCTACGCGCACCGTGTTCAGCTGCAACAAGTTCACGGT
GAACGCTGCCGTCTACGGCCCTGTCTGGCGGTCGCTGCGGAGGAACATGGTGCAAAACAT
GCTCAGTGCAAGCAAGATTAGGGAGTTCAGCAATTTGAGAGATGTGTCCATGGATAAGCT
CATTGACAGGCTACGGAGCGAGGCTGAGGCTAATGATGGAGCTGTTTGGGTTCTGAAGAA
TGCTCGATTTGCTGTTTTTTGCATCCTTTTGTCTATGTGTTTTGGAGTCGAAATGGATGA
GGAGACCATTGAGGTGATGGATGATCTGATGAAAACTGTTCTAATCACTCTTGATCCAAG
ACTTGATGACTATCTCCCACTTCTAAGCCCATTCTTCTCAAAGCAGAGGAAAGCCGCCAC
GGAAGTGCGGAAGAGGCAGATCAAAACTGTTGTCCCCTTCATCGAGAGGCGGCGTGCGGC
GCTTGAAAACCCAGGATCAGATAAAACCGCGGCTTCATTTTCCTACCTCGACACGATCTT
CGATCTCAAAATCGAGGGGCGTAAATCATCTCCAACCAACCCCGAGCTCGTCACACTCTG
CTCCGAGTTCCTCAATGGCGGCACCGACACAACAGGGACGGCGGTCGAGTGGGCAATTGC
CCGAATGATCGAGAACCCCGAGATTCAGTCAAAACTATACGAAGAGATCAAAACAACAGT
GGGTGATCGTAAGGTTCAAGAGAAAGACATGGAGAAGATGCCTTACCTAAACGCAGTTTC
AAAAGAACTACTACGTAAACACCCTCCCACCTACTTTTCCCTAACTCATGCAGTCACAGA
GCCAGCGAAGTTGGCAGGCTACGACATACCCACAGACGCAAATGTCGAGTTCTTCTTGCC
ACCCATCTCCGAGGACCCCAAGCTATGGAAGAATCCCGAAAAGTTCGACCCCGACCGCTT
TTTCTTGGGCGGTGAAGACGCCGATATAACCGGAGTGACCGGCGTAAAAATGATGCCATT
CGGAGTAGGGCGAAGGATATGCCCTGGTTTGAGCATGGCCACCGTGCATGTGAACCTAAT
GCTGGCAAGGATGGTGCAGGACTTCGAGTGGAGCGCATACCCTGAAAACAGTAAGATTGA
TTTTAGTGAAAAGTTGGAATTCACAGTGGTGATGAAGAACCCTCTAAGGGCCAAGATTAA
GCCTAGGGTATGAAATTGATGCATGCGGATTAGCAATAATATGGCTTTATATATATATAT
GTATTATCTATCTATGTTCACTTGCTTATTTTTTTGGTTTATTTCTTCTTCATAGTCCTC
GTGAAACTAGGGTTTCAATGCGTGGTGGTTTTCAGGTTTCAGAATATATGAGAGACATTG
TTATTG