Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0073g00050.t01
CDS Infomation

cds chromosome:12X:13:13065176:13068257:1 gene:VIT_13s0073g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGAGAAACCTTCGCTGGTTCGATCTTGTGGGGTTTGGCCTTGGCGGCATGGTCGGG
GCGGGTGTCTTCGTTACCACCGGTCGCGCCAGCCGTCTCTACGCCGGCCCTGCTGTTGTG
CTTTCCTACGCCATTGCCGGTATCTGCGCACTCCTCTCTGCTTTCTGCTATACCGAGTTC
GCCGTCGACATGCCAGTCGCCGGCGGCGCCTTTAGCTACCTCCGCGTCACCTTCGGTGAA
TTTGCGGCGTTTTTAACGGGGGCAAATCTTGTGATGGACTACGTTTTATCGAACGCCGCC
GTAGCCCGGAGTTTCACGGCTTACCTTGGCACAGCCATCGGATTTCCCACCACTAAATGG
AGGTTCACCGTCTCCGGACTGCCCAAAGGGTTCAACGAAATCGACCTGGTCGCGGTCGCC
GTCGTCCTAATCATCACACTCATTATCTGTTACAGCACGAGAGAGAGCTCAGTGGTGAAC
ATGGTGCTGACGGCGATGCATATACTCTTCATAGCTTTTGTGATAGTAGTTGGGTTTTGG
AGGGGAGATTGGAAGAACTTCACTGAACCGGCGGATCCGCGGCGTCATCAGGGCGGGTTC
TTTCCGTTCGGAGCTTCGGGTGTTTTCAATGGGGCAGCCATGGTTTACCTGAGCTATATA
GGATACGACGCCGTTTCGACGTTGGCTGAAGAAGTCCGAAACCCGGTCAAGGATATCCCA
ATCGGCGTTTCTGGTTCTGTTATGCTCGTTACCATTCTCTACTGCTTAATGGCGGCTTCA
ATGTCGAAGCTCCTCCCATACGATGCGATCGATCCGGAGGCGCCGTTCTCGGCGGCGTTC
AGAGGGCAATCCAACGGCTGGAAATGGGTGTCGAACGTAATCGGAGCGGGTGCAAGCTTC
GGGATACTGACGTCGCTGATGGTGGCGATGCTGGGGCAGGCAAGGTACATGTGCGTCATC
GGACGGTCGAAGGTGGTCCCATCATGGTTCGCGAGGGTCCACCATAAGACTTGTACGCCT
GTCAACGCTTCCGCTTTTCTTGGAATCTTCACTGCGGCAATAGCAGTATTCACGGATCTA
AATGTGCTGCTCAACCTCGTATCCATCGGCACCCTGTTTGTGTTTTACATGGTTGCGAAT
GCAGTGATTTACAGGCGATACGTGTCGGTTGGGGCAACAAATCCATGGCCGACGCTGTCC
TTTCTAGTATCTTTCTCGCTCACATCCATAATATTCACACTGATATGGCATTTTGCAGCC
CCGGGGCATCCAAAGGAGGTTATGCTGGGAGCCTGCACCGTAGTCGCTGTTGCCATTTTG
CAAATGTTCCATTGCATGGTCCCCCAGGTTAGGAAACCCGAACACTGGGGGGTCCCTCTA
ATGCCATGGATACCATCCATCTCCATTTTCTTGAATATTTTCCTTTTGGGCTCCCTTGAT
AGGCCCTCCTATGTGCGCTTCGGCTACTTTTCGGCCCTTGCAGTGCTTGTCTATGTGTTA
TACAGTGTCCATGCCAGCTTTGATGCCCAAGAAGATGGCTATTACATTCAAAAGAATGCT
GAAATTCCGAAGGATTCAGAAGCAAGTGTGGACGCCATTACCATGGTCTAG

Peptide Sequence

PEP ID

VIT_13s0073g00050.t01
PEP Infomation

pep chromosome:12X:13:13065176:13068257:1 gene:VIT_13s0073g00050 transcript:VIT_13s0073g00050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQRNLRWFDLVGFGLGGMVGAGVFVTTGRASRLYAGPAVVLSYAIAGICALLSAFCYTEF
AVDMPVAGGAFSYLRVTFGEFAAFLTGANLVMDYVLSNAAVARSFTAYLGTAIGFPTTKW
RFTVSGLPKGFNEIDLVAVAVVLIITLIICYSTRESSVVNMVLTAMHILFIAFVIVVGFW
RGDWKNFTEPADPRRHQGGFFPFGASGVFNGAAMVYLSYIGYDAVSTLAEEVRNPVKDIP
IGVSGSVMLVTILYCLMAASMSKLLPYDAIDPEAPFSAAFRGQSNGWKWVSNVIGAGASF
GILTSLMVAMLGQARYMCVIGRSKVVPSWFARVHHKTCTPVNASAFLGIFTAAIAVFTDL
NVLLNLVSIGTLFVFYMVANAVIYRRYVSVGATNPWPTLSFLVSFSLTSIIFTLIWHFAA
PGHPKEVMLGACTVVAVAILQMFHCMVPQVRKPEHWGVPLMPWIPSISIFLNIFLLGSLD
RPSYVRFGYFSALAVLVYVLYSVHASFDAQEDGYYIQKNAEIPKDSEASVDAITMV

Transcript Sequence

Transcript ID

VIT_13s0073g00050.t01
Transcript Infomation

cdna chromosome:12X:13:13065176:13068257:1 gene:VIT_13s0073g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCCATGGACACCCATGGCTCCTCCTCTTTCTCTAGCTTCACAGCCTATGCCCGAGCCCT
GGCTCAGACCCCCTCTCGCCTCGCCCGCCGGGCATGCTCCGTCTCTACCTCCTTCGAGGA
GATGAGCAGGGTCCGGGCCCGCTCCGGTTCCGACATGCAGAGAAACCTTCGCTGGTTCGA
TCTTGTGGGGTTTGGCCTTGGCGGCATGGTCGGGGCGGGTGTCTTCGTTACCACCGGTCG
CGCCAGCCGTCTCTACGCCGGCCCTGCTGTTGTGCTTTCCTACGCCATTGCCGGTATCTG
CGCACTCCTCTCTGCTTTCTGCTATACCGAGTTCGCCGTCGACATGCCAGTCGCCGGCGG
CGCCTTTAGCTACCTCCGCGTCACCTTCGGTGAATTTGCGGCGTTTTTAACGGGGGCAAA
TCTTGTGATGGACTACGTTTTATCGAACGCCGCCGTAGCCCGGAGTTTCACGGCTTACCT
TGGCACAGCCATCGGATTTCCCACCACTAAATGGAGGTTCACCGTCTCCGGACTGCCCAA
AGGGTTCAACGAAATCGACCTGGTCGCGGTCGCCGTCGTCCTAATCATCACACTCATTAT
CTGTTACAGCACGAGAGAGAGCTCAGTGGTGAACATGGTGCTGACGGCGATGCATATACT
CTTCATAGCTTTTGTGATAGTAGTTGGGTTTTGGAGGGGAGATTGGAAGAACTTCACTGA
ACCGGCGGATCCGCGGCGTCATCAGGGCGGGTTCTTTCCGTTCGGAGCTTCGGGTGTTTT
CAATGGGGCAGCCATGGTTTACCTGAGCTATATAGGATACGACGCCGTTTCGACGTTGGC
TGAAGAAGTCCGAAACCCGGTCAAGGATATCCCAATCGGCGTTTCTGGTTCTGTTATGCT
CGTTACCATTCTCTACTGCTTAATGGCGGCTTCAATGTCGAAGCTCCTCCCATACGATGC
GATCGATCCGGAGGCGCCGTTCTCGGCGGCGTTCAGAGGGCAATCCAACGGCTGGAAATG
GGTGTCGAACGTAATCGGAGCGGGTGCAAGCTTCGGGATACTGACGTCGCTGATGGTGGC
GATGCTGGGGCAGGCAAGGTACATGTGCGTCATCGGACGGTCGAAGGTGGTCCCATCATG
GTTCGCGAGGGTCCACCATAAGACTTGTACGCCTGTCAACGCTTCCGCTTTTCTTGGAAT
CTTCACTGCGGCAATAGCAGTATTCACGGATCTAAATGTGCTGCTCAACCTCGTATCCAT
CGGCACCCTGTTTGTGTTTTACATGGTTGCGAATGCAGTGATTTACAGGCGATACGTGTC
GGTTGGGGCAACAAATCCATGGCCGACGCTGTCCTTTCTAGTATCTTTCTCGCTCACATC
CATAATATTCACACTGATATGGCATTTTGCAGCCCCGGGGCATCCAAAGGAGGTTATGCT
GGGAGCCTGCACCGTAGTCGCTGTTGCCATTTTGCAAATGTTCCATTGCATGGTCCCCCA
GGTTAGGAAACCCGAACACTGGGGGGTCCCTCTAATGCCATGGATACCATCCATCTCCAT
TTTCTTGAATATTTTCCTTTTGGGCTCCCTTGATAGGCCCTCCTATGTGCGCTTCGGCTA
CTTTTCGGCCCTTGCAGTGCTTGTCTATGTGTTATACAGTGTCCATGCCAGCTTTGATGC
CCAAGAAGATGGCTATTACATTCAAAAGAATGCTGAAATTCCGAAGGATTCAGAAGCAAG
TGTGGACGCCATTACCATGGTCTAGAAAGTGTAAAAAAAAAAAAAAAAACCCTCCTTTTT
TTCTTTTTTTGTCTTTTTTTGGTTGATGGTTCCACTATGAAAGGGGAAGAAGAAGATAAG
AATAGGCTTCAATTTTGCT