Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0067g03880.t01
CDS Infomation

cds chromosome:12X:13:2199485:2205980:-1 gene:VIT_13s0067g03880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCACCTGTAACTGTGAAAGAAGAGATGGAGAGGGACTTGGAAAAGGGACTGGTT
ACGCCAGCACCGAACCAGAACCCTCTGGCAGAGCCATCGCCGTCGCCGTCTCCGTCGTCG
ACTGCCTCAGCTCCGGCGCTGGTGCTTTCGAGCTCCAGCAAACGGATCGATCAGGCGGGA
AAGAAGAAGTATGTGAAGCAAGTGACCGGCCGTCACAACGACACGGAACTCCATCTAGCG
GCGCAGCGCGGCGATTTGGCCGCCGTGAAGCAGATTCTGGACGATATTCATTCGCAGATC
GGTGATACCATGAGCGGTGCCGAGTTCGAAGCTGAAGTTGCTGAGGTGAGGACTTTGATG
GTGAATGAAGTGAATGAGTTGGGAGAGACGGCGCTGTTCACTGCAGCGGAGAAAGGGCAT
ATTGATGTCGTGAAGGAATTGTTGAAGTATTCAAATAGAGAGAGTATATCGAGGAAGAAC
CGGTCGCAGTTCGGTCCTTTGCATATAGCTGCTGCTCAGGGACACCATGCCATTGTCCAA
GTTCTGTTAGACTATGACCCAGAGCTGAGCAAAACAATTGGGCCATCAAATGCAACCCCC
CTAGTTTCTGCTGCATCAAGAGGGCATACAGCAGTAGTTATTGAACTGTTGTCAAAGGAT
TGTGGCTTGTTAGAGATTGCCAAATCCAATGGGAAAAATGCATTACATTTGGCTGCTCGA
CAGGGTCATGTTGACATTGTAGAAGCATTACTGGAAAAAGATCCACAGTTGGCACGAAGA
ACTGACAAGAAAGGACAAACTGCATTACACATGGCTGTAAAAGGGGTGAGCTGTGAGGTG
GTGAAATTACTTCTTAATGCAGATGCCGCTATTGTTATGCTCCCAGACAAGCAAGGTAAT
ACAGCATTACATGTCGCCACCAGGAAAAAGCGAGCAGAGATAGTGAATGAATTATTGCGC
CTCCCTGACGCCAATGTTAATGCACTGAACAGAGACCACAAAACATCTCTTGATATAGCG
GAAGACCTTTCCCACTCTGAAGAAGCTTCAGAAATAAAGGACTGCCTTATTCGCTATGGT
GCTATCAAAGCTAATGAACTGAACCAACCAAGAGACGAGTTGAGGAATACCGTGACTCAG
ATCAAGAGAGATGTCCACACTCAACTTGAACAAACCAGGAGAACAAACAAAAATGTCCAT
AACATTTCTAAAGAGCTCAGAAAACTCCACCGAGAAGGGATCAACAATGCCACCAACTCA
GTGACTGTGGTGGCTGTTCTATTTGCCACAGTTGCCTTTGCCGCCATTTTCACTGTGCCT
GGTGGAGATAACCCCGATGGGACAGGGGTGGTAGTGAAGAGTGCTTCTTTTAAAATCTTC
TTCATCTTCAATGCTTTGGCACTTTTCACATCCTTGGCTGTTGTGGTAGTTCAAATTACT
TTGGTCAGAGGGGAGACAAAAGCAGAGAGAAACGTGGTGGTGGTGATCAACAAGTTGATG
TGGTTGGCTTCTGTGTGTACGTCAGTGGCTTTTATTGCCTCCTCTTATATAGTGGTTGGC
AGGCATAACGAATGGGCTGCGATTTTCGTTACAGTTGTAGGAGGAGTAATAATGGCCGGG
GTCCTTGGCACCATGACTTACTATGTGGTTAAATCAAAGAGGATAAGATCAGTGAGGAGG
AAAGACAAGAATGCAAGGAGGAGCGGATCCAACTCCTGGCATCACTCCGAGTTCTCCGAT
TCAGAAATTGATAGGATTTATGCCCTCTGA

Peptide Sequence

PEP ID

VIT_13s0067g03880.t01
PEP Infomation

pep chromosome:12X:13:2199485:2205980:-1 gene:VIT_13s0067g03880 transcript:VIT_13s0067g03880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASPVTVKEEMERDLEKGLVTPAPNQNPLAEPSPSPSPSSTASAPALVLSSSSKRIDQAG
KKKYVKQVTGRHNDTELHLAAQRGDLAAVKQILDDIHSQIGDTMSGAEFEAEVAEVRTLM
VNEVNELGETALFTAAEKGHIDVVKELLKYSNRESISRKNRSQFGPLHIAAAQGHHAIVQ
VLLDYDPELSKTIGPSNATPLVSAASRGHTAVVIELLSKDCGLLEIAKSNGKNALHLAAR
QGHVDIVEALLEKDPQLARRTDKKGQTALHMAVKGVSCEVVKLLLNADAAIVMLPDKQGN
TALHVATRKKRAEIVNELLRLPDANVNALNRDHKTSLDIAEDLSHSEEASEIKDCLIRYG
AIKANELNQPRDELRNTVTQIKRDVHTQLEQTRRTNKNVHNISKELRKLHREGINNATNS
VTVVAVLFATVAFAAIFTVPGGDNPDGTGVVVKSASFKIFFIFNALALFTSLAVVVVQIT
LVRGETKAERNVVVVINKLMWLASVCTSVAFIASSYIVVGRHNEWAAIFVTVVGGVIMAG
VLGTMTYYVVKSKRIRSVRRKDKNARRSGSNSWHHSEFSDSEIDRIYAL

Transcript Sequence

Transcript ID

VIT_13s0067g03880.t01
Transcript Infomation

cdna chromosome:12X:13:2199485:2205980:-1 gene:VIT_13s0067g03880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACAAATCTGAGTTCTCACTCCTCACCGAAATGATTTTTTAGGTTTTCACGCCTGTTCTG
GCTAACCAAACATGGCTTCACCTGTAACTGTGAAAGAAGAGATGGAGAGGGACTTGGAAA
AGGGACTGGTTACGCCAGCACCGAACCAGAACCCTCTGGCAGAGCCATCGCCGTCGCCGT
CTCCGTCGTCGACTGCCTCAGCTCCGGCGCTGGTGCTTTCGAGCTCCAGCAAACGGATCG
ATCAGGCGGGAAAGAAGAAGTATGTGAAGCAAGTGACCGGCCGTCACAACGACACGGAAC
TCCATCTAGCGGCGCAGCGCGGCGATTTGGCCGCCGTGAAGCAGATTCTGGACGATATTC
ATTCGCAGATCGGTGATACCATGAGCGGTGCCGAGTTCGAAGCTGAAGTTGCTGAGGTGA
GGACTTTGATGGTGAATGAAGTGAATGAGTTGGGAGAGACGGCGCTGTTCACTGCAGCGG
AGAAAGGGCATATTGATGTCGTGAAGGAATTGTTGAAGTATTCAAATAGAGAGAGTATAT
CGAGGAAGAACCGGTCGCAGTTCGGTCCTTTGCATATAGCTGCTGCTCAGGGACACCATG
CCATTGTCCAAGTTCTGTTAGACTATGACCCAGAGCTGAGCAAAACAATTGGGCCATCAA
ATGCAACCCCCCTAGTTTCTGCTGCATCAAGAGGGCATACAGCAGTAGTTATTGAACTGT
TGTCAAAGGATTGTGGCTTGTTAGAGATTGCCAAATCCAATGGGAAAAATGCATTACATT
TGGCTGCTCGACAGGGTCATGTTGACATTGTAGAAGCATTACTGGAAAAAGATCCACAGT
TGGCACGAAGAACTGACAAGAAAGGACAAACTGCATTACACATGGCTGTAAAAGGGGTGA
GCTGTGAGGTGGTGAAATTACTTCTTAATGCAGATGCCGCTATTGTTATGCTCCCAGACA
AGCAAGGTAATACAGCATTACATGTCGCCACCAGGAAAAAGCGAGCAGAGATAGTGAATG
AATTATTGCGCCTCCCTGACGCCAATGTTAATGCACTGAACAGAGACCACAAAACATCTC
TTGATATAGCGGAAGACCTTTCCCACTCTGAAGAAGCTTCAGAAATAAAGGACTGCCTTA
TTCGCTATGGTGCTATCAAAGCTAATGAACTGAACCAACCAAGAGACGAGTTGAGGAATA
CCGTGACTCAGATCAAGAGAGATGTCCACACTCAACTTGAACAAACCAGGAGAACAAACA
AAAATGTCCATAACATTTCTAAAGAGCTCAGAAAACTCCACCGAGAAGGGATCAACAATG
CCACCAACTCAGTGACTGTGGTGGCTGTTCTATTTGCCACAGTTGCCTTTGCCGCCATTT
TCACTGTGCCTGGTGGAGATAACCCCGATGGGACAGGGGTGGTAGTGAAGAGTGCTTCTT
TTAAAATCTTCTTCATCTTCAATGCTTTGGCACTTTTCACATCCTTGGCTGTTGTGGTAG
TTCAAATTACTTTGGTCAGAGGGGAGACAAAAGCAGAGAGAAACGTGGTGGTGGTGATCA
ACAAGTTGATGTGGTTGGCTTCTGTGTGTACGTCAGTGGCTTTTATTGCCTCCTCTTATA
TAGTGGTTGGCAGGCATAACGAATGGGCTGCGATTTTCGTTACAGTTGTAGGAGGAGTAA
TAATGGCCGGGGTCCTTGGCACCATGACTTACTATGTGGTTAAATCAAAGAGGATAAGAT
CAGTGAGGAGGAAAGACAAGAATGCAAGGAGGAGCGGATCCAACTCCTGGCATCACTCCG
AGTTCTCCGATTCAGAAATTGATAGGATTTATGCCCTCTGATGCAGAACCTATCAGAGTT
TGGAGAATCGTAGAGAAAGAAGAACAACTGATGCAGGATAGCGAGGTGTTTGGTTGCACT
TCCCCAAAAGCCCTGAAGCTCCAGGAATTAACAAGGATACAATTGACAGCAAGCGTTCTG
CAGGGGTTGGCTGGCATGTTGTCTATATTCCTGCCATTGGACTGTAAGTCTGTAAAAACT
GAAACCCTTTGACCTTAGGCCTGTTCTGTTGATGCCCTTGTTTAGCTAAATATGAAAACG
GAAAAGGGGAGGTTGCTTTTTTG