Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0067g03210.t01
CDS Infomation

cds chromosome:12X:13:1777205:1784184:1 gene:VIT_13s0067g03210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGTGAGAGCCGCCGCCGTCTCTGGCCGCTTGCCGCCGCTTCTCCACCACTCTCAG
TTTCCTGTTGTTACTGGTTTATGTGTTGGATCGAGGAAATTGAATTTCCCACCAAAGAGG
TTGAGGCTTTTCGCCCGATATTCTCAAGCACAGGATCGGTTTTCCTCGCGTCTTCAAGAC
AGTATTGAAAATTTGCCCAAACTGGTGGAGGATATTGTCCAGACATCTATAAACACAGGT
CCACGTGGAGCCCTAAGGGCAGCTCAAGGTATTCAAGCAGTTATTAGAGTTGGTGGCGAG
TGGCTAGCAGATGTATCACAGTCAACAAATTCATCTGCAGGATTACCAACTCAAATTCAG
CTTGGATTACTTTCTCCCCTTTATTTGAGGCGGTTGTTTGAAAGCATGGGGGCAACCTAT
ATCAAATTAGGTCAGTTCATAGCATCCGCACCCACATTGTTCCCACCAGAATATGTCCAA
GAATTTCAGAGCTGTTTTGACAGAGCTCCTGCAGTTCCTTTTGAAGATATCCAAAGAGTC
TTGCGTGAAGAATTAGGGAGACCAATAGATAGTGTTTATGAATATGTTGACCCGACACCA
ATTGCTTCTGCCTCAATTGCACAGGTTCATGGGGCAAAGCTTAGAGGCTCCCAAGAGGAT
GTAGTGATAAAGGTCTTGAAACCTGGAATAGAGGATATATTGGTGGCAGATCTGAACTTT
GTATACATTGTTGCTCGCATTTTGGAATTTTTGAATCCTGAACTTGGCCGTGCATCGCTG
GTTGGTATTGTGAAAGACATAAGGGAATCAATGCTTGAAGAAGTTGACTTCAATAAGGAG
GCTGCAAATATTGAAGCCTTTAGGAGATATTTAGAAGCAATGGGACTCACAAGGCAAGCT
ACAGCTCCAAAAGTGTATCATCAGTGCAGTACTCGACGAGTCCTGACAATGCAGAGGCTT
TATGGAGTTCCTCTTACTGATCTAGACTCTATTAGTTCACTTGTTTCTAGTCCTGAGACC
AGTCTTGTAACTGCCCTTAATGTATGGTTTGGTAGTTTGCTTGCCTGTGAAACCTTTCAT
GCAGATGTTCATGCAGGCAATTTGTGGTTGCTACGTGATGGCCGCATTGGGTTTCTTGAT
TTTGGAATTGTTGGACGCATATCCCCAAAAACATGGGCTGCTATGGAAGTCTTTTTGGAA
TCAATTGCAACCGAAGAGTATGAGTCAATGGCATCTGCTTTAATTGAAATGGGTGCTACA
AACAAGGACGTGGATTTCAGGGCCTTTGCAAGGGATTTGGAAAAGATATTCTCATCAATT
CAGGATTTGGATACAGAAATTATTGTTGCAACAACCAGAGGCCCATCCACAAACACAACT
GCAGTTGCTGCTAATGTAGTTGTTGATGAGAGGCAGATGAATGCACTTTTTCTTGATGTG
GTTCGGGTTAGTGAATCCTATGGACTGAGATTTCCTCGGGAGTTTGCACTTCTCATGAAA
CAGCTTCTGTATTTTGACCGATATACAAGGCTGTTAGCTCCCAACTTGAACATGCTTCAG
GACCAGAGAATCACCATTGTTTCAAATAGAGGAGGCAGGAATAGAGACACTTTCAAATGA

Peptide Sequence

PEP ID

VIT_13s0067g03210.t01
PEP Infomation

pep chromosome:12X:13:1777205:1784184:1 gene:VIT_13s0067g03210 transcript:VIT_13s0067g03210.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVRAAAVSGRLPPLLHHSQFPVVTGLCVGSRKLNFPPKRLRLFARYSQAQDRFSSRLQD
SIENLPKLVEDIVQTSINTGPRGALRAAQGIQAVIRVGGEWLADVSQSTNSSAGLPTQIQ
LGLLSPLYLRRLFESMGATYIKLGQFIASAPTLFPPEYVQEFQSCFDRAPAVPFEDIQRV
LREELGRPIDSVYEYVDPTPIASASIAQVHGAKLRGSQEDVVIKVLKPGIEDILVADLNF
VYIVARILEFLNPELGRASLVGIVKDIRESMLEEVDFNKEAANIEAFRRYLEAMGLTRQA
TAPKVYHQCSTRRVLTMQRLYGVPLTDLDSISSLVSSPETSLVTALNVWFGSLLACETFH
ADVHAGNLWLLRDGRIGFLDFGIVGRISPKTWAAMEVFLESIATEEYESMASALIEMGAT
NKDVDFRAFARDLEKIFSSIQDLDTEIIVATTRGPSTNTTAVAANVVVDERQMNALFLDV
VRVSESYGLRFPREFALLMKQLLYFDRYTRLLAPNLNMLQDQRITIVSNRGGRNRDTFK

Transcript Sequence

Transcript ID

VIT_13s0067g03210.t01
Transcript Infomation

cdna chromosome:12X:13:1777205:1784184:1 gene:VIT_13s0067g03210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCACCTGTCACTAGAAATGGCTGTGAGAGCCGCCGCCGTCTCTGGCCGCTTGCCGCCGCT
TCTCCACCACTCTCAGTTTCCTGTTGTTACTGGTTTATGTGTTGGATCGAGGAAATTGAA
TTTCCCACCAAAGAGGTTGAGGCTTTTCGCCCGATATTCTCAAGCACAGGATCGGTTTTC
CTCGCGTCTTCAAGACAGTATTGAAAATTTGCCCAAACTGGTGGAGGATATTGTCCAGAC
ATCTATAAACACAGGTCCACGTGGAGCCCTAAGGGCAGCTCAAGGTATTCAAGCAGTTAT
TAGAGTTGGTGGCGAGTGGCTAGCAGATGTATCACAGTCAACAAATTCATCTGCAGGATT
ACCAACTCAAATTCAGCTTGGATTACTTTCTCCCCTTTATTTGAGGCGGTTGTTTGAAAG
CATGGGGGCAACCTATATCAAATTAGGTCAGTTCATAGCATCCGCACCCACATTGTTCCC
ACCAGAATATGTCCAAGAATTTCAGAGCTGTTTTGACAGAGCTCCTGCAGTTCCTTTTGA
AGATATCCAAAGAGTCTTGCGTGAAGAATTAGGGAGACCAATAGATAGTGTTTATGAATA
TGTTGACCCGACACCAATTGCTTCTGCCTCAATTGCACAGGTTCATGGGGCAAAGCTTAG
AGGCTCCCAAGAGGATGTAGTGATAAAGGTCTTGAAACCTGGAATAGAGGATATATTGGT
GGCAGATCTGAACTTTGTATACATTGTTGCTCGCATTTTGGAATTTTTGAATCCTGAACT
TGGCCGTGCATCGCTGGTTGGTATTGTGAAAGACATAAGGGAATCAATGCTTGAAGAAGT
TGACTTCAATAAGGAGGCTGCAAATATTGAAGCCTTTAGGAGATATTTAGAAGCAATGGG
ACTCACAAGGCAAGCTACAGCTCCAAAAGTGTATCATCAGTGCAGTACTCGACGAGTCCT
GACAATGCAGAGGCTTTATGGAGTTCCTCTTACTGATCTAGACTCTATTAGTTCACTTGT
TTCTAGTCCTGAGACCAGTCTTGTAACTGCCCTTAATGTATGGTTTGGTAGTTTGCTTGC
CTGTGAAACCTTTCATGCAGATGTTCATGCAGGCAATTTGTGGTTGCTACGTGATGGCCG
CATTGGGTTTCTTGATTTTGGAATTGTTGGACGCATATCCCCAAAAACATGGGCTGCTAT
GGAAGTCTTTTTGGAATCAATTGCAACCGAAGAGTATGAGTCAATGGCATCTGCTTTAAT
TGAAATGGGTGCTACAAACAAGGACGTGGATTTCAGGGCCTTTGCAAGGGATTTGGAAAA
GATATTCTCATCAATTCAGGATTTGGATACAGAAATTATTGTTGCAACAACCAGAGGCCC
ATCCACAAACACAACTGCAGTTGCTGCTAATGTAGTTGTTGATGAGAGGCAGATGAATGC
ACTTTTTCTTGATGTGGTTCGGGTTAGTGAATCCTATGGACTGAGATTTCCTCGGGAGTT
TGCACTTCTCATGAAACAGCTTCTGTATTTTGACCGATATACAAGGCTGTTAGCTCCCAA
CTTGAACATGCTTCAGGACCAGAGAATCACCATTGTTTCAAATAGAGGAGGCAGGAATAG
AGACACTTTCAAATGAATCTCACAGATGTAGAATTTTTGGGTAGTGCTTGTAAATACTAC
CACAAAGATAGACCCCAACGTTTATTATATCTCATAGAAACCCTTTTGGGACATCAGGAA
ATAAAAATATATATATATTTTATATGACATTAGAGTACAACTGTTTTCTCTTGATATTTT
TATCTTCTCATGGAAATACTCTTCTTATATATCACTTCTTTGTGTGATC