Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0067g02930.t01
CDS Infomation

cds chromosome:12X:13:1578658:1580497:1 gene:VIT_13s0067g02930 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5BMT9]
Sequence

ATGGCTACTGCAGCATTTTCTTCTATCTCTCTTGCCCTCTTTCTCTTCTGTCTATGCCTC
CAAGGCACAAATGGTGACTATGGTGGGTGGGAAGGTGGGCATGCCACATTCTATGGCGGT
GGTGACGCCTCAGGCACAATGGGTGGGGCTTGTGGGTATGGCAACTTGTACAGCCAAGGG
TATGGGACCAACACTGCAGCTCTCAGCACCGCTCTCTTCAACAGTGGGCTGAGCTGTGGG
GCATGTTACGAGATGAAATGCAACGATGACCCCAAATGGTGCCTCCCAGGGACCCTAACC
GTGACTGCCACAAACTTCTGCCCTCCTAACTTGGCCTTGTCCAACACCAACGGCGGATGG
TGCAATCCCCCCCTTCAGCACTTCGATCTAGCTGAGCCTGCCTTCCTTCAGATTGCCCAG
TACCGAGCTGGAATCGTACCTGTGTCTTTCAGAAGAGTCCCCTGTGTGAAGAAAGGAGGG
ATCCGCTTTACCATCAACGGCCACTCCTACTTCAACTTGGTGCTCATCACAAACGTGGCC
GGAGCGGGAGACGTCAGGGCAGTATCAATAAAGGGGTCTAAGACCGGGTGGCAGCCCATG
TCAAGGAACTGGGGCCAGAACTGGCAGAGCAACTCATACCTCAACGGCCAGACCCTCTCA
TTCCAAGTCACAGCAAGCGATGGCCGGACCATGACAAGCCTCAATGTGGCGCCTGCTGGC
TGGCAGTTTGGGCAAACATATGAGGGGGCTCAGTTCTAA

Peptide Sequence

PEP ID

VIT_13s0067g02930.t01
PEP Infomation

pep chromosome:12X:13:1578658:1580497:1 gene:VIT_13s0067g02930 transcript:VIT_13s0067g02930.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5BMT9]
Sequence

MATAAFSSISLALFLFCLCLQGTNGDYGGWEGGHATFYGGGDASGTMGGACGYGNLYSQG
YGTNTAALSTALFNSGLSCGACYEMKCNDDPKWCLPGTLTVTATNFCPPNLALSNTNGGW
CNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTINGHSYFNLVLITNVA
GAGDVRAVSIKGSKTGWQPMSRNWGQNWQSNSYLNGQTLSFQVTASDGRTMTSLNVAPAG
WQFGQTYEGAQF

Transcript Sequence

Transcript ID

VIT_13s0067g02930.t01
Transcript Infomation

cdna chromosome:12X:13:1578658:1580497:1 gene:VIT_13s0067g02930 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5BMT9]
Sequence

ACCAAGACAAAGCCTTGAGCACTTAGCCCATTACTCCTCTCAATGGCTACTGCAGCATTT
TCTTCTATCTCTCTTGCCCTCTTTCTCTTCTGTCTATGCCTCCAAGGCACAAATGGTGAC
TATGGTGGGTGGGAAGGTGGGCATGCCACATTCTATGGCGGTGGTGACGCCTCAGGCACA
ATGGGTGGGGCTTGTGGGTATGGCAACTTGTACAGCCAAGGGTATGGGACCAACACTGCA
GCTCTCAGCACCGCTCTCTTCAACAGTGGGCTGAGCTGTGGGGCATGTTACGAGATGAAA
TGCAACGATGACCCCAAATGGTGCCTCCCAGGGACCCTAACCGTGACTGCCACAAACTTC
TGCCCTCCTAACTTGGCCTTGTCCAACACCAACGGCGGATGGTGCAATCCCCCCCTTCAG
CACTTCGATCTAGCTGAGCCTGCCTTCCTTCAGATTGCCCAGTACCGAGCTGGAATCGTA
CCTGTGTCTTTCAGAAGAGTCCCCTGTGTGAAGAAAGGAGGGATCCGCTTTACCATCAAC
GGCCACTCCTACTTCAACTTGGTGCTCATCACAAACGTGGCCGGAGCGGGAGACGTCAGG
GCAGTATCAATAAAGGGGTCTAAGACCGGGTGGCAGCCCATGTCAAGGAACTGGGGCCAG
AACTGGCAGAGCAACTCATACCTCAACGGCCAGACCCTCTCATTCCAAGTCACAGCAAGC
GATGGCCGGACCATGACAAGCCTCAATGTGGCGCCTGCTGGCTGGCAGTTTGGGCAAACA
TATGAGGGGGCTCAGTTCTAAATTCTCACTAGTGTGTGGCTATGACTATGAGTCTGTATA
TGGCAATGTATCCATTGTTTGGGAGAAGGGAAAATGGAAAGGAAAGAGTAGGAAGTATAG
GGAGATCTATTGCTGTGGTGGCTAATTGGCACCCGCATGGGCTAGTATATTATATATAGA
AGGATTGATTGTGAGTAATGGTTTGATTTGAAAGAGGGATGTTCTGTTGGTCGCCTTTTG
TTGATAGCAAGGCCATGGATGATGCCCTCCAAGCTTTTTAGATTTGGTCTCCAATTTGGG
TTCAGACCCAATTGAAGCAACCTGTATCAGTTCTTAATGATTGATGATCAAAGTAATTAA
ACAGCTTTCTTTTCTACTTTTTCAAA