Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0067g02450.t01
CDS Infomation

cds chromosome:12X:13:1338013:1342394:1 gene:VIT_13s0067g02450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uroporphyrinogen decarboxylase [Source:UniProtKB/TrEMBL;Acc:D7T4F6]
Sequence

ATGTCGTGCATCTACAGCAGCTCAATCTCTTCCTTCTCTGCTCTCTCCACTTCCCTCAGA
TCGAGGTCTCCTTCTCCTTCAAATTCAAAGCCCAGGATTTACTGTGCCCTTGGAGGGACT
GTGGCAGAACCAATAATTATTAATGCTACTGAACCCCTCTTGCTTACTGCTGTTCGAGGT
GAAGATGTTGAAAGACCCCCAGTTTGGCTTATGAGGCAAGCAGGGAGGTACATGAAGAGT
TACCAAATCATATGTGAGAAGTATCCTTCATTTCGTGAAAGATCAGAAAATGTTGATCTT
GTTGTGGAAATTTCTCTGCAGCCATGGAAAGTTTTTAAACCTGATGGGGTTATTTTATTC
TCAGACATCCTTACCCCTCTTTCGGGGATGAATATACCTTTTGACATCATAAAAGGTAAA
GGTCCTGTCATATTCAATCCTTTGCGCACAGCTGATGATGTTGAACAAGTAAGAGAATTT
GTTCCTGAGGATTCAGTTCCATATGTTGGGGAAGCATTGACAATCTTGAGAAAAGAGGTG
GATAATGCAGCAGCAGTGCTGGGTTTTGTTGGGGCCCCCTTTACGCTGGCATCATATGTG
GTTGAAGGTGGTTCATCAAAGCATTTCTCCAAAATAAAGAGACTAGCTTTCTCTCAACCC
AAGGTTCTCCATGCACTTCTTCAGAAATTCACAACCTCCATGGCAAAGTACATTCAGTAC
CAAGCTGACAATGGAGCTCAAGCTGTTCAGATCTTCGACTCCTGGGCAACAGAACTTAGC
CCAGTAGACTTTGAGGAGTTCAGCCTGCCTTACTTAAAGCAGATTGTGGATTCTGTGAAA
CAAACCCATCCAAATCTCCCTCTAATTCTCTACGCAAGCGGGTCTGGGGGCTTGCTCGAG
AGGCTACCTTTGACAGGTGTTGATGTAGTGAGCTTGGATTGGACAGTTGACATGGCTGAA
GGCCGGCGGAGACTGGGAACCGATGTGGCCGTTCAGGGCAATATAGATCCCGGCGTTCTA
TTTGGTTCAAAAGAGTTCATCACCAACCGGATAAACGACACAGTGAGGAAAGCTGGTAAA
GGGAAACACATTTTGAATCTTGGCCATGGAATTGTGGTAGGTACACCAGAAGAGAATGTT
GCTCATTTCTTTGAAGTAGCTAGAGGAATCAGATACTAG

Peptide Sequence

PEP ID

VIT_13s0067g02450.t01
PEP Infomation

pep chromosome:12X:13:1338013:1342394:1 gene:VIT_13s0067g02450 transcript:VIT_13s0067g02450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uroporphyrinogen decarboxylase [Source:UniProtKB/TrEMBL;Acc:D7T4F6]
Sequence

MSCIYSSSISSFSALSTSLRSRSPSPSNSKPRIYCALGGTVAEPIIINATEPLLLTAVRG
EDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWKVFKPDGVILF
SDILTPLSGMNIPFDIIKGKGPVIFNPLRTADDVEQVREFVPEDSVPYVGEALTILRKEV
DNAAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLQKFTTSMAKYIQY
QADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKQTHPNLPLILYASGSGGLLE
RLPLTGVDVVSLDWTVDMAEGRRRLGTDVAVQGNIDPGVLFGSKEFITNRINDTVRKAGK
GKHILNLGHGIVVGTPEENVAHFFEVARGIRY

Transcript Sequence

Transcript ID

VIT_13s0067g02450.t01
Transcript Infomation

cdna chromosome:12X:13:1338013:1342394:1 gene:VIT_13s0067g02450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uroporphyrinogen decarboxylase [Source:UniProtKB/TrEMBL;Acc:D7T4F6]
Sequence

CGGAAAATGAAATCCAGAGACTCTGAGAATTGAGAAATGCGAATTGGAACTTTGAAACCC
GAACCAGTTCAGGGTTAAACTCGTAGCCAAACATGTCGTGCATCTACAGCAGCTCAATCT
CTTCCTTCTCTGCTCTCTCCACTTCCCTCAGATCGAGGTCTCCTTCTCCTTCAAATTCAA
AGCCCAGGATTTACTGTGCCCTTGGAGGGACTGTGGCAGAACCAATAATTATTAATGCTA
CTGAACCCCTCTTGCTTACTGCTGTTCGAGGTGAAGATGTTGAAAGACCCCCAGTTTGGC
TTATGAGGCAAGCAGGGAGGTACATGAAGAGTTACCAAATCATATGTGAGAAGTATCCTT
CATTTCGTGAAAGATCAGAAAATGTTGATCTTGTTGTGGAAATTTCTCTGCAGCCATGGA
AAGTTTTTAAACCTGATGGGGTTATTTTATTCTCAGACATCCTTACCCCTCTTTCGGGGA
TGAATATACCTTTTGACATCATAAAAGGTAAAGGTCCTGTCATATTCAATCCTTTGCGCA
CAGCTGATGATGTTGAACAAGTAAGAGAATTTGTTCCTGAGGATTCAGTTCCATATGTTG
GGGAAGCATTGACAATCTTGAGAAAAGAGGTGGATAATGCAGCAGCAGTGCTGGGTTTTG
TTGGGGCCCCCTTTACGCTGGCATCATATGTGGTTGAAGGTGGTTCATCAAAGCATTTCT
CCAAAATAAAGAGACTAGCTTTCTCTCAACCCAAGGTTCTCCATGCACTTCTTCAGAAAT
TCACAACCTCCATGGCAAAGTACATTCAGTACCAAGCTGACAATGGAGCTCAAGCTGTTC
AGATCTTCGACTCCTGGGCAACAGAACTTAGCCCAGTAGACTTTGAGGAGTTCAGCCTGC
CTTACTTAAAGCAGATTGTGGATTCTGTGAAACAAACCCATCCAAATCTCCCTCTAATTC
TCTACGCAAGCGGGTCTGGGGGCTTGCTCGAGAGGCTACCTTTGACAGGTGTTGATGTAG
TGAGCTTGGATTGGACAGTTGACATGGCTGAAGGCCGGCGGAGACTGGGAACCGATGTGG
CCGTTCAGGGCAATATAGATCCCGGCGTTCTATTTGGTTCAAAAGAGTTCATCACCAACC
GGATAAACGACACAGTGAGGAAAGCTGGTAAAGGGAAACACATTTTGAATCTTGGCCATG
GAATTGTGGTAGGTACACCAGAAGAGAATGTTGCTCATTTCTTTGAAGTAGCTAGAGGAA
TCAGATACTAGACCCAGATCCAGGTTTTTTTTCCTTTGATGCTAAATTGAATTTCATGTA
CTATTGGTTTTGTTTAACCTCTTGTTTCAATTGTTGTACTACTTTAGAGGGCTGCTTCAA
AGTAGAGAAAGAATACTAAATGCGATTCTGTAGACAGGTCTATCGTCTTA