Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0067g02190.t01
CDS Infomation

cds chromosome:12X:13:1228901:1242590:-1 gene:VIT_13s0067g02190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTTCCACTGATAACGGTGAACTCAAAGAGGAAATTGAGGAAAGCAATGGGAGCAAA
GTAGAGGGTCTGGTTCCTCTTCACATTTCAACATCTCAAAGAGGGTTAATTAGTGATGAA
GACACTAAAAAAGGGTTTAAGAAAAGGTTTCTTGGTAGAGTGAGGTTGCTCAAATTTGGC
TCAGCCAAATTTCGGCAACTAGCTGAGGGGAGAGATGAGCTTTCACGAGCTGTGCCTTCT
TCCAGTCATCATATTAGGGAGCGTTTCAATGAGGTTTTTATGCGGAAAATTGATTGGGTT
TCACTCAGGAAAATGTGCAAAGAATGGATTAGAGACCCCATGAACATGGCCCTTTTTGCG
TGGATTGTGTGTGTTGCTGTCTCGGGTGCGATTTTGTTCCTTGTCATGACAGGGATGTTA
AACCATGAACTACCAAAGAAGTCTCAGAGAGATGCGTGGTTTGAAGTTAATAATCAAATT
CTCAATGCGCTGTTTACTCTTATGTGTTTGTATCAACACCCAAAGCGATTCTACCATCTT
GTCCTTCTTTGCAGATGGAGGCCAGAAGACATTTCTAAACTTAGAAAGATTTACTGCAAG
AATGGGACTTATAAGCCCCATGAATGGGCGCACATGATGGTTGTTGTTATTCTACTCCAT
ATCAATTGTTTTGCTCAGTATGCGCTTTGTGGTCTTAACTTGGGGTACAGGAGATCTGAG
CGACCCGCTATAGGAGTTGGAATATGCATAGCTGTTGCAATTGGTGCACCTGCAATTGCT
GGTGTTTATACCATTGTTAGCCCCCTTGGGAAGGAGTATGATTCTGAAACGGATGAGGAA
GCACAAGTTCCAATCACAACTGACTCAAACAGGTCAAGCCAGTTGAGACGAAAGTCGATG
GAGAGGAGGTTCTCATTTGCATCAAGGGATGAGCAGAGGGTTGTCGAGAGTAGGCCAGAA
TGGAGTGGAGGGGTTCTTGATTTCTGGGATGATATTTCTCTAGCATATCTCTCACTGTTC
TGCAGTTTTTGTGTTTTTGGGTGGAATATGGAGAGACTTGGATTTGGAAACATGTATGTT
CATATTGCTACTTTTCTTTTGTTTTGTATGGCTCCTTTCTGGATTTTCAACTTGGCAGCT
GTTAATATTGATAATGACACCGCAAGGGCGGCTTTGGGGACGATGGGGCTTATTCTTTGT
GTGTTTGGCTTACTCTATGGCGGATTCTGGAGGATTCAGATGAGAAAGAGATTCAATTTG
CCAGCTTATCACTTCTGTTGTGGTGAACCTGCTGTTACTGATTGTGCACTGTGGCTTTGC
TGTTGTTGGTGTTCTCTTTCTCAGGAAGTGAGGACCGGGAATTCCTATGATATTGTAGAA
AATACATTTTGCAGGAAAAAAATGGATGGTGGTAGTCAGCTGCCAATTTCACCTTTGCCT
CGTGAAGATGGTGTGAGTCAGATCAGGTCCGGCTCAAGTTCTCCACTTGGGAACAGTGCC
AGCCCATTGAAAATCATAGCTGCCTCTCCAAGTTCAAGCAGAGCTTCAAAGGGATATTAC
AGTCCCGAAAGGAATCTACCCGTGGTGGAGGAAGAGTCTCCTGCAGGAGAACTGGCTAAC
TCACCGGAAATTCTGGAGGAGGTTGATGCGAGTAACCAAAGGGTGGTACGCGCCCTATAT
GAAGCCTTAGGCTCACGTGACGTCGACACGGTCCATCGACTTCTCGCCGCCGACCTCGAG
TGGTGGTTCCATGGCCCGCCTTCCCACCAGTTTATGATGCGCTTGCTCACTGGTGTCTCA
TCCGACGAGTCATTTGTCTTCGAGCCACTCGCCTTCGCGTCTTTCGGTTCGACAGTCCTC
GCCGAGGGCTGCGATCACAGCGGTTCAATCGCCTGGGTCCACGCCTGGACGGTCACTGAT
GGGGTAATAACCCAAGTCCGAGAGTACTTCAACACCTCCCTCACCGTCACCCGTCTCTCC
AACTCCGACTTCACGACGTCACCCTCGTCGTCGATCTCTGCCGCGTCGTCGTCGTCGACT
CCCTCGCCGCCGTCGCGCCATTGCCCCTCCGTCTGGGAGAGCAGCTTCTCGGATCGGGTC
GGAAAATCGGTTCCGGGTCTTGTCCTGGCAATATAA

Peptide Sequence

PEP ID

VIT_13s0067g02190.t01
PEP Infomation

pep chromosome:12X:13:1228901:1242590:-1 gene:VIT_13s0067g02190 transcript:VIT_13s0067g02190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVSTDNGELKEEIEESNGSKVEGLVPLHISTSQRGLISDEDTKKGFKKRFLGRVRLLKFG
SAKFRQLAEGRDELSRAVPSSSHHIRERFNEVFMRKIDWVSLRKMCKEWIRDPMNMALFA
WIVCVAVSGAILFLVMTGMLNHELPKKSQRDAWFEVNNQILNALFTLMCLYQHPKRFYHL
VLLCRWRPEDISKLRKIYCKNGTYKPHEWAHMMVVVILLHINCFAQYALCGLNLGYRRSE
RPAIGVGICIAVAIGAPAIAGVYTIVSPLGKEYDSETDEEAQVPITTDSNRSSQLRRKSM
ERRFSFASRDEQRVVESRPEWSGGVLDFWDDISLAYLSLFCSFCVFGWNMERLGFGNMYV
HIATFLLFCMAPFWIFNLAAVNIDNDTARAALGTMGLILCVFGLLYGGFWRIQMRKRFNL
PAYHFCCGEPAVTDCALWLCCCWCSLSQEVRTGNSYDIVENTFCRKKMDGGSQLPISPLP
REDGVSQIRSGSSSPLGNSASPLKIIAASPSSSRASKGYYSPERNLPVVEEESPAGELAN
SPEILEEVDASNQRVVRALYEALGSRDVDTVHRLLAADLEWWFHGPPSHQFMMRLLTGVS
SDESFVFEPLAFASFGSTVLAEGCDHSGSIAWVHAWTVTDGVITQVREYFNTSLTVTRLS
NSDFTTSPSSSISAASSSSTPSPPSRHCPSVWESSFSDRVGKSVPGLVLAI

Transcript Sequence

Transcript ID

VIT_13s0067g02190.t01
Transcript Infomation

cdna chromosome:12X:13:1228901:1242590:-1 gene:VIT_13s0067g02190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGCTCTCGGCTTTGGATTCTAGAGCTGTCTCCTTCCAGATTATATTGGACTCTCTGTACA
TCTGTTCCTCTGCCATCATCATGGGACCATAGGGTGGAATGGAACTGAAATTGAAGTGGG
TCACCTGGGAATTGGGAAGCTGAAATTCATGGTGATTTGCACACTTTGAAGTTTGAAGAT
TTGTGGAATTGGAAAAACCCCAGAAACCTAGTTTTTGAATCTGGTGTGAGAATGGTTTCC
ACTGATAACGGTGAACTCAAAGAGGAAATTGAGGAAAGCAATGGGAGCAAAGTAGAGGGT
CTGGTTCCTCTTCACATTTCAACATCTCAAAGAGGGTTAATTAGTGATGAAGACACTAAA
AAAGGGTTTAAGAAAAGGTTTCTTGGTAGAGTGAGGTTGCTCAAATTTGGCTCAGCCAAA
TTTCGGCAACTAGCTGAGGGGAGAGATGAGCTTTCACGAGCTGTGCCTTCTTCCAGTCAT
CATATTAGGGAGCGTTTCAATGAGGTTTTTATGCGGAAAATTGATTGGGTTTCACTCAGG
AAAATGTGCAAAGAATGGATTAGAGACCCCATGAACATGGCCCTTTTTGCGTGGATTGTG
TGTGTTGCTGTCTCGGGTGCGATTTTGTTCCTTGTCATGACAGGGATGTTAAACCATGAA
CTACCAAAGAAGTCTCAGAGAGATGCGTGGTTTGAAGTTAATAATCAAATTCTCAATGCG
CTGTTTACTCTTATGTGTTTGTATCAACACCCAAAGCGATTCTACCATCTTGTCCTTCTT
TGCAGATGGAGGCCAGAAGACATTTCTAAACTTAGAAAGATTTACTGCAAGAATGGGACT
TATAAGCCCCATGAATGGGCGCACATGATGGTTGTTGTTATTCTACTCCATATCAATTGT
TTTGCTCAGTATGCGCTTTGTGGTCTTAACTTGGGGTACAGGAGATCTGAGCGACCCGCT
ATAGGAGTTGGAATATGCATAGCTGTTGCAATTGGTGCACCTGCAATTGCTGGTGTTTAT
ACCATTGTTAGCCCCCTTGGGAAGGAGTATGATTCTGAAACGGATGAGGAAGCACAAGTT
CCAATCACAACTGACTCAAACAGGTCAAGCCAGTTGAGACGAAAGTCGATGGAGAGGAGG
TTCTCATTTGCATCAAGGGATGAGCAGAGGGTTGTCGAGAGTAGGCCAGAATGGAGTGGA
GGGGTTCTTGATTTCTGGGATGATATTTCTCTAGCATATCTCTCACTGTTCTGCAGTTTT
TGTGTTTTTGGGTGGAATATGGAGAGACTTGGATTTGGAAACATGTATGTTCATATTGCT
ACTTTTCTTTTGTTTTGTATGGCTCCTTTCTGGATTTTCAACTTGGCAGCTGTTAATATT
GATAATGACACCGCAAGGGCGGCTTTGGGGACGATGGGGCTTATTCTTTGTGTGTTTGGC
TTACTCTATGGCGGATTCTGGAGGATTCAGATGAGAAAGAGATTCAATTTGCCAGCTTAT
CACTTCTGTTGTGGTGAACCTGCTGTTACTGATTGTGCACTGTGGCTTTGCTGTTGTTGG
TGTTCTCTTTCTCAGGAAGTGAGGACCGGGAATTCCTATGATATTGTAGAAAATACATTT
TGCAGGAAAAAAATGGATGGTGGTAGTCAGCTGCCAATTTCACCTTTGCCTCGTGAAGAT
GGTGTGAGTCAGATCAGGTCCGGCTCAAGTTCTCCACTTGGGAACAGTGCCAGCCCATTG
AAAATCATAGCTGCCTCTCCAAGTTCAAGCAGAGCTTCAAAGGGATATTACAGTCCCGAA
AGGAATCTACCCGTGGTGGAGGAAGAGTCTCCTGCAGGAGAACTGGCTAACTCACCGGAA
ATTCTGGAGGAGGTTGATGCGAGTAACCAAAGGGTGGTACGCGCCCTATATGAAGCCTTA
GGCTCACGTGACGTCGACACGGTCCATCGACTTCTCGCCGCCGACCTCGAGTGGTGGTTC
CATGGCCCGCCTTCCCACCAGTTTATGATGCGCTTGCTCACTGGTGTCTCATCCGACGAG
TCATTTGTCTTCGAGCCACTCGCCTTCGCGTCTTTCGGTTCGACAGTCCTCGCCGAGGGC
TGCGATCACAGCGGTTCAATCGCCTGGGTCCACGCCTGGACGGTCACTGATGGGGTAATA
ACCCAAGTCCGAGAGTACTTCAACACCTCCCTCACCGTCACCCGTCTCTCCAACTCCGAC
TTCACGACGTCACCCTCGTCGTCGATCTCTGCCGCGTCGTCGTCGTCGACTCCCTCGCCG
CCGTCGCGCCATTGCCCCTCCGTCTGGGAGAGCAGCTTCTCGGATCGGGTCGGAAAATCG
GTTCCGGGTCTTGTCCTGGCAATATAAGGAAACGTGCCGATCACTTGCAGCCGTACGCAA
TATAATAATATACAATAAATAAATAAAGAAGGAGTGATTTGGCTGCCACTCCCGATTTCC
ATATGGGCTGAACTCACCGGAATCTCTCGTGTCTGGTGGATGTGGAGTCCAAGGTTCTGT
TTGGCTCTTTTGTTTCTTCATCCAGTGTGTCTTAGTTATCCAGTACTTTGGTTGCAGTAT
TGTACCGTGTGTCAGAGTTTGGAAGAACCAATCAGATGGAGATGCCTTCTTGGTCATATC
TTCATCACCAGTGTGTAATAAAATGGTTTCATATTTCAATAAATATGTATTCCTCCGATT
GCCTTA