Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0067g01890.t01
CDS Infomation

cds chromosome:12X:13:1028149:1037073:-1 gene:VIT_13s0067g01890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTCAAGAACAGCTCCAAGCCTCCTCTGCGTCTCCACCACCCTTTGACCCATCACAA
CCCTCTACTCCAATCTCCTACCCTATCAAAACCCTTCAAGAACTCGAGTCCCGCTCCTAT
TTCAGCTCCTTTCACTACCCATTTAATGTGGCATCTGTGCCTATTCAATCTGGGTCGTTG
CCCAGTAGGCCGAGGATGCTTGTGTGCCATGACATGGCTGGTGGGTACCTTGATGATAAG
TGGGTTCAGGGAGGGACTAATGAGGGTGCCTATGCGATATGGCACTGGTATTTGATGGAT
GTGTTCGTGTATTTTTCGCATAGTCTTGTGACTCTTCCGCCTCCTTGCTGGACTAATGCT
GCTCACAAGCATGGTGTTAAGGTATTGGGAACCTTCATCACAGAATGGGATGAAGGAAGA
GCCATTTGCAATGCACTGCTATCAACAAAGGAGTCTGCTCAAATGTATGCTGAGCGCTTA
ACAGAGCTTGCTGTTGCTTTGGGCTTTGATGGGTGGCTGATCAATATGGAAGTTGCATTG
GCTAAAGGGCAAATCCCTAATCTGAAAGAATTTGTCAGCCATTTAACCCAGACCATGCAC
TCTTCAATGCCTGGATCTTTAGTTATATGGTATGATAGCGTCACCATTGATAGTAGTCTT
GAGTGGCAAGATCAACTGAACAACAAGAATAAACCTTTCTTTGATATATGTGATGGCATT
TTTATAAACTACACGTGGGCGGAAAGCTATCCAAAGATTTCAGCTGATGCTGCTGGTGAT
AGAAAGTTTGATGTGTACATGGGTATTGATGTTTTTGGAAGGAATACCTATGGTGGTGGA
CAATGGAATACAAATGTTGCACTTGATTTGCTGAAGAAAGAAGAAGTGTCAGCTGCCATA
TTTGCACCTGGATGGGTCTATGAAACCAAGCAACCACCTGATTTTCAGACTGCACAGAAT
CGTTGGTGGTCTCTTATTGAGAAATCATGGGGAATACAACAAAAATACCCCAGAGTATTG
CCATTCTACTCAAATTTTGATCAGGGTCATGGTTATCATTTTGCAATTGATGCAGTCCAA
GTATCAGATACTCCTTGGTGCAACATCTCTTGCCAAAGCTTTCAGCCTTTCCTTGAGTTT
TCTGAAGACTCTACCAACACTATTCAAGTCATTGTCAATTCTAAGGAAGCATCTTATAGC
GGAGGAGGGAATATCACATTTAAAGGAACTCTTCAAGGAAATGATTATTTCAGGACGAGG
CTCTTTCTGGGAGAGATTCTTTTGGGGAATTTACCAGTCCACTTTACATATTCTTTGAAA
TCAGATAGCAGCTCTCTGGTTGGCCTTTCTCTTGAGTTCTCTTCTACCTTGAATGAGAGA
ATGTCGGTTCTTCTTGCAGCCCAGGGAAGCACATTGCTTACAATGAACCAATTCTCAAGC
AAATTCAGCAAAGTGATCATGCCACATAGAGTTGTAAAGATAGAAGCAGCTCCAGGGTGG
GTCATACAGGAGAGTAGTATTGCAATGAATGGGTACATATTAACAGAAATTCATGCTGTA
TGCTACAAGTCAAAGCCTGATTTTATTGACTTGAAATTGAATTCTGGGTCAGATCATCTT
GATAATGATTTAGCTCGCAGTCCATCAAATTATTATGCAGTGCTTGGTCATCTCATGGTT
AAAACTTCTGATCAGAACCCAGATTTCTTACCCTCTAGTTCATGGCTGGTTGAGGTTCAA
CATATTAAATGGGCTTCAGATTTGCAGGGAGCCAAGACCCTTAGTGCTAAGATCATTTGG
AAATTGAAAGATGGAAATTATTCCATGTCCCAAAACTACAATGTTTATGTTGAGAAACTA
GCAAATGAAGAGGTTGGAAATCCTGGTACAATGCTTAAAAGAGAGCAGGAATATCTTGGA
GTGGCACAAGTGGAAGCTTTTTATGTTTCTGACTTCGTGGTTCCTTCTGGAACTTCCAGT
CTTAAATTCATCATACAAGTATGTGGTACTGATGGAGCTAGCCAGAAGCTAGATGATTCT
CCATATTTTCAACTGGATATTGAAGAGAAAGAATTGCAGTTAGCCAAGGTGCACAAGTAA

Peptide Sequence

PEP ID

VIT_13s0067g01890.t01
PEP Infomation

pep chromosome:12X:13:1028149:1037073:-1 gene:VIT_13s0067g01890 transcript:VIT_13s0067g01890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSQEQLQASSASPPPFDPSQPSTPISYPIKTLQELESRSYFSSFHYPFNVASVPIQSGSL
PSRPRMLVCHDMAGGYLDDKWVQGGTNEGAYAIWHWYLMDVFVYFSHSLVTLPPPCWTNA
AHKHGVKVLGTFITEWDEGRAICNALLSTKESAQMYAERLTELAVALGFDGWLINMEVAL
AKGQIPNLKEFVSHLTQTMHSSMPGSLVIWYDSVTIDSSLEWQDQLNNKNKPFFDICDGI
FINYTWAESYPKISADAAGDRKFDVYMGIDVFGRNTYGGGQWNTNVALDLLKKEEVSAAI
FAPGWVYETKQPPDFQTAQNRWWSLIEKSWGIQQKYPRVLPFYSNFDQGHGYHFAIDAVQ
VSDTPWCNISCQSFQPFLEFSEDSTNTIQVIVNSKEASYSGGGNITFKGTLQGNDYFRTR
LFLGEILLGNLPVHFTYSLKSDSSSLVGLSLEFSSTLNERMSVLLAAQGSTLLTMNQFSS
KFSKVIMPHRVVKIEAAPGWVIQESSIAMNGYILTEIHAVCYKSKPDFIDLKLNSGSDHL
DNDLARSPSNYYAVLGHLMVKTSDQNPDFLPSSSWLVEVQHIKWASDLQGAKTLSAKIIW
KLKDGNYSMSQNYNVYVEKLANEEVGNPGTMLKREQEYLGVAQVEAFYVSDFVVPSGTSS
LKFIIQVCGTDGASQKLDDSPYFQLDIEEKELQLAKVHK

Transcript Sequence

Transcript ID

VIT_13s0067g01890.t01
Transcript Infomation

cdna chromosome:12X:13:1028149:1037073:-1 gene:VIT_13s0067g01890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCCTCATTTCCTTCAAAAACCTTCTCAAACCAATCCACAACGCCTTCAAAAACCTCTTCA
TCCCAATGTCTCAAGAACAGCTCCAAGCCTCCTCTGCGTCTCCACCACCCTTTGACCCAT
CACAACCCTCTACTCCAATCTCCTACCCTATCAAAACCCTTCAAGAACTCGAGTCCCGCT
CCTATTTCAGCTCCTTTCACTACCCATTTAATGTGGCATCTGTGCCTATTCAATCTGGGT
CGTTGCCCAGTAGGCCGAGGATGCTTGTGTGCCATGACATGGCTGGTGGGTACCTTGATG
ATAAGTGGGTTCAGGGAGGGACTAATGAGGGTGCCTATGCGATATGGCACTGGTATTTGA
TGGATGTGTTCGTGTATTTTTCGCATAGTCTTGTGACTCTTCCGCCTCCTTGCTGGACTA
ATGCTGCTCACAAGCATGGTGTTAAGGTATTGGGAACCTTCATCACAGAATGGGATGAAG
GAAGAGCCATTTGCAATGCACTGCTATCAACAAAGGAGTCTGCTCAAATGTATGCTGAGC
GCTTAACAGAGCTTGCTGTTGCTTTGGGCTTTGATGGGTGGCTGATCAATATGGAAGTTG
CATTGGCTAAAGGGCAAATCCCTAATCTGAAAGAATTTGTCAGCCATTTAACCCAGACCA
TGCACTCTTCAATGCCTGGATCTTTAGTTATATGGTATGATAGCGTCACCATTGATAGTA
GTCTTGAGTGGCAAGATCAACTGAACAACAAGAATAAACCTTTCTTTGATATATGTGATG
GCATTTTTATAAACTACACGTGGGCGGAAAGCTATCCAAAGATTTCAGCTGATGCTGCTG
GTGATAGAAAGTTTGATGTGTACATGGGTATTGATGTTTTTGGAAGGAATACCTATGGTG
GTGGACAATGGAATACAAATGTTGCACTTGATTTGCTGAAGAAAGAAGAAGTGTCAGCTG
CCATATTTGCACCTGGATGGGTCTATGAAACCAAGCAACCACCTGATTTTCAGACTGCAC
AGAATCGTTGGTGGTCTCTTATTGAGAAATCATGGGGAATACAACAAAAATACCCCAGAG
TATTGCCATTCTACTCAAATTTTGATCAGGGTCATGGTTATCATTTTGCAATTGATGCAG
TCCAAGTATCAGATACTCCTTGGTGCAACATCTCTTGCCAAAGCTTTCAGCCTTTCCTTG
AGTTTTCTGAAGACTCTACCAACACTATTCAAGTCATTGTCAATTCTAAGGAAGCATCTT
ATAGCGGAGGAGGGAATATCACATTTAAAGGAACTCTTCAAGGAAATGATTATTTCAGGA
CGAGGCTCTTTCTGGGAGAGATTCTTTTGGGGAATTTACCAGTCCACTTTACATATTCTT
TGAAATCAGATAGCAGCTCTCTGGTTGGCCTTTCTCTTGAGTTCTCTTCTACCTTGAATG
AGAGAATGTCGGTTCTTCTTGCAGCCCAGGGAAGCACATTGCTTACAATGAACCAATTCT
CAAGCAAATTCAGCAAAGTGATCATGCCACATAGAGTTGTAAAGATAGAAGCAGCTCCAG
GGTGGGTCATACAGGAGAGTAGTATTGCAATGAATGGGTACATATTAACAGAAATTCATG
CTGTATGCTACAAGTCAAAGCCTGATTTTATTGACTTGAAATTGAATTCTGGGTCAGATC
ATCTTGATAATGATTTAGCTCGCAGTCCATCAAATTATTATGCAGTGCTTGGTCATCTCA
TGGTTAAAACTTCTGATCAGAACCCAGATTTCTTACCCTCTAGTTCATGGCTGGTTGAGG
TTCAACATATTAAATGGGCTTCAGATTTGCAGGGAGCCAAGACCCTTAGTGCTAAGATCA
TTTGGAAATTGAAAGATGGAAATTATTCCATGTCCCAAAACTACAATGTTTATGTTGAGA
AACTAGCAAATGAAGAGGTTGGAAATCCTGGTACAATGCTTAAAAGAGAGCAGGAATATC
TTGGAGTGGCACAAGTGGAAGCTTTTTATGTTTCTGACTTCGTGGTTCCTTCTGGAACTT
CCAGTCTTAAATTCATCATACAAGTATGTGGTACTGATGGAGCTAGCCAGAAGCTAGATG
ATTCTCCATATTTTCAACTGGATATTGAAGAGAAAGAATTGCAGTTAGCCAAGGTGCACA
AGTAAACATGATTCAAGGTTAAAGTTGAGTAGTGAGTTGTTTAAAGCTTAGAAAAATTGC