Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0067g01270.t01
CDS Infomation

cds chromosome:12X:13:727903:730265:1 gene:VIT_13s0067g01270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGTGCGCTGTGGCTGTAGCGAGCTCTCCCGTGTTCTCACCGTCCAGGGTTTCTTCA
GTCTTCTGCAAATCATCGGTTTCGTCTCCCGACCTTCGGAAGCTTAATCTCCTCCGCTCT
CCGCCACCGTTGACACCCTCATCGTCACTGTCGTTGCCGGCGTCTCCGAGGCTACACAAG
CAGGAAATTGTGCACAAGGAATTTCAGGAGGGGTTGTCGGTCGCGCCAACTACGGCTTCG
AAACGGAAGAGGCCGGCGAAGTTGAGTATTCCGATGATTCCGGCGTGTTGCTTCGCGCTT
GATTCGCCGGCGAGAGTGGAGAGGTTGGATGAGGTGGAGGTTGAGGGGGAGGGATACTCG
GTGTATTGTAAGAGAGGGAGGAGGGCTGCCATGGAGGATCGCTACTCGGCTGATGTTGAT
CTCGGAGGAGATTCTAAACAGGCTTTCTTTGGTGTTTTTGATGGGCATGGAGGAGCAAAA
GCTGCTGATTTTGCAGCAAAGAACATTACTAAGAATGTGATGGCTGAAGTGACAAAGAAA
GGGGATGAAGGAATCGAGGTGGCAATAAAAAATGGTTACCTGGCCACTGATGCAGAGTTT
TTGAAGGAAGATGTTAGTGGTGGTTCTTGCTGTGTGACTGCATTGATTCGGGAAGGTGAA
CTTCATGTCTCAAATGCAGGTGATTGTCGTGCTGTTATGAGCAGAGGAGGAATTGCTGAA
GCCCTCACATCTGATCACCGACCTTCAAGGGAAGATGAAATGGATAGGATTCAAACTCTG
GGTGGATATGTGGACCGTTGCCATGGTGTTTGGAGAATACAGGGTTCTCTTGCTGTGTCA
AGAGGAATTGGAGACAGAAATCTTAAACAATGGGTAACAGCAGAACCAGAGACAAAAAGT
TTAAAGATAAAACCCGAATGCGAGTTCTTAATCCTAGCTTCTGATGGCCTATGGGACAAG
GTTACAAATCAGGAAGCAGTAGATGTAGTCCGGCCTTTATGCATAGGAGTTGATAAGCCA
GAGCCATTTTCTGCTTGTAAAAATCTTGCTCGCCTGGCAATAAGGGGAGGCTCCACGGAT
GATATAAGTGTGATGGTAATCCAGTTAAGTCACTTCCTTTCATGA

Peptide Sequence

PEP ID

VIT_13s0067g01270.t01
PEP Infomation

pep chromosome:12X:13:727903:730265:1 gene:VIT_13s0067g01270 transcript:VIT_13s0067g01270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQCAVAVASSPVFSPSRVSSVFCKSSVSSPDLRKLNLLRSPPPLTPSSSLSLPASPRLHK
QEIVHKEFQEGLSVAPTTASKRKRPAKLSIPMIPACCFALDSPARVERLDEVEVEGEGYS
VYCKRGRRAAMEDRYSADVDLGGDSKQAFFGVFDGHGGAKAADFAAKNITKNVMAEVTKK
GDEGIEVAIKNGYLATDAEFLKEDVSGGSCCVTALIREGELHVSNAGDCRAVMSRGGIAE
ALTSDHRPSREDEMDRIQTLGGYVDRCHGVWRIQGSLAVSRGIGDRNLKQWVTAEPETKS
LKIKPECEFLILASDGLWDKVTNQEAVDVVRPLCIGVDKPEPFSACKNLARLAIRGGSTD
DISVMVIQLSHFLS

Transcript Sequence

Transcript ID

VIT_13s0067g01270.t01
Transcript Infomation

cdna chromosome:12X:13:727903:730265:1 gene:VIT_13s0067g01270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAGAAAGAAAGAAAAGGATACCAGAGAAGGAACCGAGAGACAAAATGCAGTGCGCTGTG
GCTGTAGCGAGCTCTCCCGTGTTCTCACCGTCCAGGGTTTCTTCAGTCTTCTGCAAATCA
TCGGTTTCGTCTCCCGACCTTCGGAAGCTTAATCTCCTCCGCTCTCCGCCACCGTTGACA
CCCTCATCGTCACTGTCGTTGCCGGCGTCTCCGAGGCTACACAAGCAGGAAATTGTGCAC
AAGGAATTTCAGGAGGGGTTGTCGGTCGCGCCAACTACGGCTTCGAAACGGAAGAGGCCG
GCGAAGTTGAGTATTCCGATGATTCCGGCGTGTTGCTTCGCGCTTGATTCGCCGGCGAGA
GTGGAGAGGTTGGATGAGGTGGAGGTTGAGGGGGAGGGATACTCGGTGTATTGTAAGAGA
GGGAGGAGGGCTGCCATGGAGGATCGCTACTCGGCTGATGTTGATCTCGGAGGAGATTCT
AAACAGGCTTTCTTTGGTGTTTTTGATGGGCATGGAGGAGCAAAAGCTGCTGATTTTGCA
GCAAAGAACATTACTAAGAATGTGATGGCTGAAGTGACAAAGAAAGGGGATGAAGGAATC
GAGGTGGCAATAAAAAATGGTTACCTGGCCACTGATGCAGAGTTTTTGAAGGAAGATGTT
AGTGGTGGTTCTTGCTGTGTGACTGCATTGATTCGGGAAGGTGAACTTCATGTCTCAAAT
GCAGGTGATTGTCGTGCTGTTATGAGCAGAGGAGGAATTGCTGAAGCCCTCACATCTGAT
CACCGACCTTCAAGGGAAGATGAAATGGATAGGATTCAAACTCTGGGTGGATATGTGGAC
CGTTGCCATGGTGTTTGGAGAATACAGGGTTCTCTTGCTGTGTCAAGAGGAATTGGAGAC
AGAAATCTTAAACAATGGGTAACAGCAGAACCAGAGACAAAAAGTTTAAAGATAAAACCC
GAATGCGAGTTCTTAATCCTAGCTTCTGATGGCCTATGGGACAAGGTTACAAATCAGGAA
GCAGTAGATGTAGTCCGGCCTTTATGCATAGGAGTTGATAAGCCAGAGCCATTTTCTGCT
TGTAAAAATCTTGCTCGCCTGGCAATAAGGGGAGGCTCCACGGATGATATAAGTGTGATG
GTAATCCAGTTAAGTCACTTCCTTTCATGATTCATCCTAAGAGGAAGGAAATTCAGAGGA
GGACAAGTTGATTTTGTTTTGCCTTGGAAGCTAGGAAGGTAGGAATTTTATTGATGTTCC
TCGCCATCCTGGAGCTGTTACCAGTAACGGTAATGGTGGTGGTTTTGCAGCGATAATGAC
CATGTACTAACTGCCTTCGATTGTGAAATTGTCAGAGCCGCCATGGGTAGTTTATTGAAA
TAACTGTAAATCATCCCCATTCCAAGTGAATGGATTACTAGTGATTATTAACTTACCTAG
AAACACTTATTGAATCAAATTTTGAATTTTTTGCATGATAAATGCTTGTGTATCCACCAG
CGTGAATGTTGTTTTATAGTCATTTGTATTCTTTG