Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0067g00390.t01
CDS Infomation

cds chromosome:12X:13:236696:242131:1 gene:VIT_13s0067g00390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATTTTCCAGCAACTTTTCGCGGGAATTTCAATCCCTTCTCGCACTGCAGTTCTTGC
TGTGATCTTCGCTTTCAGCCCTTCCTTTCTTCTCCGATTGTCTGGCGCCAGAAACGATGT
CGTATCAGCAATTTGCAGGTGCACCAGGTTTCAAGGTTAGGTTCTCGAAGGAGGCCAAGG
ATTGTTTGCGGTGTGACTGAGACAGAAACGGAACCGGAAAACAATAACGATGAGGAAAAA
GCACATGAAAATGGAGGAATGCCACCTTCCATTGATTCAACTGTGCAAAATGACCCACAG
CTCGATTCTCAGCCTCTAGTGGCTGATCAAGACAAAGACCAGTTTGTACATAATGCGATG
CTTAATGGGGACAACATGGTAAATAGTGATAATCAGGAAACTGAGGCCCAAGGCAATGTC
CAGGATTCTGAGAATTTAGAAGTTGCAAGTGGATCACCTCTTCCAGGTGTGAAGCCACAG
GTACTGGATGAATCAATCCGGATTCCTAAGGAGACAATTGATATTCTCAAGGATCAAGTG
TTTGGGTTTGACACTTTTTTTGTGACAAATCAGGAGCCATATGAGGGTGGAGTATTGTTT
AAGGGAAACCTCAGAGGGAAGGCTGCTAAAAGTTATGAAAAGATAACAATAAGGATGCAG
GACAGATTTGGAGATAAATATAAACTTTTTCTTCTTATCAATCCAGAGGATGATAAACCA
GTGGCAGTTGTGGTTCCTAGAAATACCTTACAACCAGAGACAACTGCTGTTCCAGAATGG
TTTGCAGCAGGGGCTTTTGGATTAGTAACAGTGTTTACCTTATTTCTCCGGAATGTGCCA
GCATTACAGTCAAATTTATTATCAGTGTTTGACAATCTAAATTTGTTAATGGATGGCCTC
CCTGGAGCCCTTGTAACTGCACTTGTTTTGGGTACACATGAGATCAGCCACATTTTAGTT
GCAAGAAGCACTGGGATTAAGCTTGGAGTGCCATACTTCGTTCCTAGTTGGCAGATAGGC
TCTTTTGGTGCTATCACAAGGATTTTAAATATTGTTCCCAACCGTGAGGATCTTCTGAAG
GTTGCAGCAGCAGGACCTATAGCTGGCTTCTCCTTGGGACTTGTTCTTTTGCTTCTAGGA
TTCCTTTTACCACCCAGTGATGGTATTGGTGTTGTTGTTGATGCTTCTGTGTTTCACGAG
TCACTTCTTGCTGGGGGTATTGCAAAGCTTCTTCTTGGAGATGTTCTCAAGGAAGGGACT
CCCATATCTGTTAATCCACTTCTAATATGGGCATGGGCTGGGCTTCTCATCAATGCCATC
AACAGCATCCCTGCTGGGGAACTAGATGGGGGCAGAATTTCTTTTGCCATATGGGGAAGA
AAGGCTTCAGCTCGCTTCACAGCTGCCTCAATTGCACTTCTAGGACTATCCTCACTGTTC
AATGATGTGGCATTTTATTGGGTGGTGCTGATATTTTTCTTACAAAGAGGGCCAATTGCT
CCACTCTCTGAGGAAATTACTGATCCTGAGGACAAGTATGTTGCCCTTGGAGTTGTAGTT
TTACTCTTGGGACTTTTGGTATGCTTACCCTACCCCTTCCCTTTCACAAATGAAGTCACC
GTAAGTTTCTAG

Peptide Sequence

PEP ID

VIT_13s0067g00390.t01
PEP Infomation

pep chromosome:12X:13:236696:242131:1 gene:VIT_13s0067g00390 transcript:VIT_13s0067g00390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNFPATFRGNFNPFSHCSSCCDLRFQPFLSSPIVWRQKRCRISNLQVHQVSRLGSRRRPR
IVCGVTETETEPENNNDEEKAHENGGMPPSIDSTVQNDPQLDSQPLVADQDKDQFVHNAM
LNGDNMVNSDNQETEAQGNVQDSENLEVASGSPLPGVKPQVLDESIRIPKETIDILKDQV
FGFDTFFVTNQEPYEGGVLFKGNLRGKAAKSYEKITIRMQDRFGDKYKLFLLINPEDDKP
VAVVVPRNTLQPETTAVPEWFAAGAFGLVTVFTLFLRNVPALQSNLLSVFDNLNLLMDGL
PGALVTALVLGTHEISHILVARSTGIKLGVPYFVPSWQIGSFGAITRILNIVPNREDLLK
VAAAGPIAGFSLGLVLLLLGFLLPPSDGIGVVVDASVFHESLLAGGIAKLLLGDVLKEGT
PISVNPLLIWAWAGLLINAINSIPAGELDGGRISFAIWGRKASARFTAASIALLGLSSLF
NDVAFYWVVLIFFLQRGPIAPLSEEITDPEDKYVALGVVVLLLGLLVCLPYPFPFTNEVT
VSF

Transcript Sequence

Transcript ID

VIT_13s0067g00390.t01
Transcript Infomation

cdna chromosome:12X:13:236696:242131:1 gene:VIT_13s0067g00390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTCTCTGTGAACTGGAGCTTCTTGTGAACACAAAGCCATGAATTTTCCAGCAACTTTT
CGCGGGAATTTCAATCCCTTCTCGCACTGCAGTTCTTGCTGTGATCTTCGCTTTCAGCCC
TTCCTTTCTTCTCCGATTGTCTGGCGCCAGAAACGATGTCGTATCAGCAATTTGCAGGTG
CACCAGGTTTCAAGGTTAGGTTCTCGAAGGAGGCCAAGGATTGTTTGCGGTGTGACTGAG
ACAGAAACGGAACCGGAAAACAATAACGATGAGGAAAAAGCACATGAAAATGGAGGAATG
CCACCTTCCATTGATTCAACTGTGCAAAATGACCCACAGCTCGATTCTCAGCCTCTAGTG
GCTGATCAAGACAAAGACCAGTTTGTACATAATGCGATGCTTAATGGGGACAACATGGTA
AATAGTGATAATCAGGAAACTGAGGCCCAAGGCAATGTCCAGGATTCTGAGAATTTAGAA
GTTGCAAGTGGATCACCTCTTCCAGGTGTGAAGCCACAGGTACTGGATGAATCAATCCGG
ATTCCTAAGGAGACAATTGATATTCTCAAGGATCAAGTGTTTGGGTTTGACACTTTTTTT
GTGACAAATCAGGAGCCATATGAGGGTGGAGTATTGTTTAAGGGAAACCTCAGAGGGAAG
GCTGCTAAAAGTTATGAAAAGATAACAATAAGGATGCAGGACAGATTTGGAGATAAATAT
AAACTTTTTCTTCTTATCAATCCAGAGGATGATAAACCAGTGGCAGTTGTGGTTCCTAGA
AATACCTTACAACCAGAGACAACTGCTGTTCCAGAATGGTTTGCAGCAGGGGCTTTTGGA
TTAGTAACAGTGTTTACCTTATTTCTCCGGAATGTGCCAGCATTACAGTCAAATTTATTA
TCAGTGTTTGACAATCTAAATTTGTTAATGGATGGCCTCCCTGGAGCCCTTGTAACTGCA
CTTGTTTTGGGTACACATGAGATCAGCCACATTTTAGTTGCAAGAAGCACTGGGATTAAG
CTTGGAGTGCCATACTTCGTTCCTAGTTGGCAGATAGGCTCTTTTGGTGCTATCACAAGG
ATTTTAAATATTGTTCCCAACCGTGAGGATCTTCTGAAGGTTGCAGCAGCAGGACCTATA
GCTGGCTTCTCCTTGGGACTTGTTCTTTTGCTTCTAGGATTCCTTTTACCACCCAGTGAT
GGTATTGGTGTTGTTGTTGATGCTTCTGTGTTTCACGAGTCACTTCTTGCTGGGGGTATT
GCAAAGCTTCTTCTTGGAGATGTTCTCAAGGAAGGGACTCCCATATCTGTTAATCCACTT
CTAATATGGGCATGGGCTGGGCTTCTCATCAATGCCATCAACAGCATCCCTGCTGGGGAA
CTAGATGGGGGCAGAATTTCTTTTGCCATATGGGGAAGAAAGGCTTCAGCTCGCTTCACA
GCTGCCTCAATTGCACTTCTAGGACTATCCTCACTGTTCAATGATGTGGCATTTTATTGG
GTGGTGCTGATATTTTTCTTACAAAGAGGGCCAATTGCTCCACTCTCTGAGGAAATTACT
GATCCTGAGGACAAGTATGTTGCCCTTGGAGTTGTAGTTTTACTCTTGGGACTTTTGGTA
TGCTTACCCTACCCCTTCCCTTTCACAAATGAAGTCACCGTAAGTTTCTAGCTCTATGTT
CCTAGTACAGTTCATTGTATAGTATCTCATAGGGATATCGGAGACTCCAGGCTACCAATA
TGCGTCAAAGAAAATTGTTAAAATTTGATTGGCTTATGAAGTGGCTGACAGGTAGTCCAT
GTCATATGGATAATTTTTGTGGGTTGTAATAAAATCAATGAACGCCTGTCAT