Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0067g00220.t01
CDS Infomation

cds chromosome:12X:13:154711:155950:-1 gene:VIT_13s0067g00220 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aquaporin PIP11 [Source:UniProtKB/TrEMBL;Acc:A3FA63]
Sequence

ATGGAAGGTAAGGAAGAGGATGTGAGAGTGGGAGCGAACAAGTTCTCAGAGAGGCAGCCG
ATAGGGACGGCGGCTCAGGGAGATGACAAGGACTACAAGGAACCGCCACCGGCGCCGCTG
TTCGAGCCTGGAGAGCTGTGTTCGTGGTCGTTTTACAGGGCTGGGATAGCGGAGTTCATA
GCCACTTTTCTGTTCCTGTACGTCTCCGTTTTGACGGTGATGGGGGTGGTTAGGGCTGAC
TCCAAGTGTTCCACGGTTGGGATTCAAGGGATTGCTTGGGCTTTTGGTGGTATGATCTTC
GCTCTCGTCTACTGCACCGCCGGAATCTCAGGTGGGCATATAAATCCAGCGGTGACCTTT
GGGCTGTTCTTGGCAAGGAAGCTGTCGCTGACGAGGGCAGTGTACTACATGGTGATGCAG
TGCCTGGGTGCGATATGTGGTGCGGGTGTAGTGAAGGGTTTCGAGAAGGGCAGGTACAAC
TCGCTGGGTGGTGGTGCCAATGTGGTGAACGCTGGCTACACCAAAGGAGATGGGCTTGGT
GCTGAGATTGTTGGCACCTTCGTCCTTGTCTACACTGTCTTCTCCGCCACTGACGCCAAG
CGTAACGCTAGAGACTCCCACGTCCCTATACTGGCACCGTTGCCAATCGGGTTCGCAGTG
TTCTTGGTGCACTTGGCCACCATCCCCATAACTGGAACCGGCATCAACCCAGCTCGGAGC
CTGGGTGCGGCCATCATCTACAACAAGGACCACGCATGGGACGACCACTGGATCTTCTGG
GTGGGACCATTCATTGGGGCCGCACTAGCAGCTTTATACCACCAGGTGGTCATCAGAGCC
ATTCCCTTCAAGTCCAAGTGA

Peptide Sequence

PEP ID

VIT_13s0067g00220.t01
PEP Infomation

pep chromosome:12X:13:154711:155950:-1 gene:VIT_13s0067g00220 transcript:VIT_13s0067g00220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aquaporin PIP11 [Source:UniProtKB/TrEMBL;Acc:A3FA63]
Sequence

MEGKEEDVRVGANKFSERQPIGTAAQGDDKDYKEPPPAPLFEPGELCSWSFYRAGIAEFI
ATFLFLYVSVLTVMGVVRADSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTF
GLFLARKLSLTRAVYYMVMQCLGAICGAGVVKGFEKGRYNSLGGGANVVNAGYTKGDGLG
AEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS
LGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKSK

Transcript Sequence

Transcript ID

VIT_13s0067g00220.t01
Transcript Infomation

cdna chromosome:12X:13:154711:155950:-1 gene:VIT_13s0067g00220 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aquaporin PIP11 [Source:UniProtKB/TrEMBL;Acc:A3FA63]
Sequence

AGAGAAGAGAAGAGAAGAGGAGAGATGGAAGGTAAGGAAGAGGATGTGAGAGTGGGAGCG
AACAAGTTCTCAGAGAGGCAGCCGATAGGGACGGCGGCTCAGGGAGATGACAAGGACTAC
AAGGAACCGCCACCGGCGCCGCTGTTCGAGCCTGGAGAGCTGTGTTCGTGGTCGTTTTAC
AGGGCTGGGATAGCGGAGTTCATAGCCACTTTTCTGTTCCTGTACGTCTCCGTTTTGACG
GTGATGGGGGTGGTTAGGGCTGACTCCAAGTGTTCCACGGTTGGGATTCAAGGGATTGCT
TGGGCTTTTGGTGGTATGATCTTCGCTCTCGTCTACTGCACCGCCGGAATCTCAGGTGGG
CATATAAATCCAGCGGTGACCTTTGGGCTGTTCTTGGCAAGGAAGCTGTCGCTGACGAGG
GCAGTGTACTACATGGTGATGCAGTGCCTGGGTGCGATATGTGGTGCGGGTGTAGTGAAG
GGTTTCGAGAAGGGCAGGTACAACTCGCTGGGTGGTGGTGCCAATGTGGTGAACGCTGGC
TACACCAAAGGAGATGGGCTTGGTGCTGAGATTGTTGGCACCTTCGTCCTTGTCTACACT
GTCTTCTCCGCCACTGACGCCAAGCGTAACGCTAGAGACTCCCACGTCCCTATACTGGCA
CCGTTGCCAATCGGGTTCGCAGTGTTCTTGGTGCACTTGGCCACCATCCCCATAACTGGA
ACCGGCATCAACCCAGCTCGGAGCCTGGGTGCGGCCATCATCTACAACAAGGACCACGCA
TGGGACGACCACTGGATCTTCTGGGTGGGACCATTCATTGGGGCCGCACTAGCAGCTTTA
TACCACCAGGTGGTCATCAGAGCCATTCCCTTCAAGTCCAAGTGATGAT