Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0064g00170.t01
CDS Infomation

cds chromosome:12X:13:21626893:21631656:1 gene:VIT_13s0064g00170 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein [Source:UniProtKB/TrEMBL;Acc:F6HBE6]
Sequence

ATGGCTTCAACCGCAACTTCACCCTTCTCTCTCATGCTAACGTACGCCGCGTCCTCTCCT
CTCCCTACCCAAGACTTCATCGCCCCTTCTCTCTCCTTCAAGACCAAGCCTCTCTTCAGG
GCTTTCTCTCTTTACCCACTTGCGCTCCAGGCCAGAGAGAGGCGGCCCAGTGGTAATGGT
CCATACGATGTGGTTGTGGCCGCTTTGGCTGCTGAAGCTGAGGTAGCTGAGGCCGTGGAG
GAGGTGGAAGGTGGGGAGGGTGACGCTGTTTCCACCGCGCCGCCGCCTAAGCCGAAGAAA
GGGAAGGCTGCGTTGCTGTTGAAGAGGGACAGGACGAGGTCTAAGAGATTCTTGGAAATT
CAAAAACTGAGGGAAAACAAGAAAGAGTATGACCTGCAGACGGCAATATCATTGCTTAAG
CAAATGGCAAGCACAAGGTTTGTGGAAACAGCTGAAGCACATTTTCGGCTCAACATTGAC
CCCAAATATAATGATCAACAACTGAGAGCAACAGTGAATTTGCCCAAGGGAACTGGACAG
ACTGTTAAAGTTGCTGTTCTAACACAAGGTGAAAAGTTTGATGAAGCAAAAAATGCTGGA
GCAGATTTGGTTGGAGGAGAGGACTTGATAGAACAGATAAAGGGAGGATTCATGGATTTT
GACAAGTTGATTGCTTCTCCAGATATGATGCCTAAGGTTGCAAGCTTAGGAAAACTTCTG
GGACCACGAGGACTCATGCCAAATCCAAAAGCTGGTACTGTTACAACTAATATACCTCAG
GCTATAGCAGAATTCAAGAAGGGAAAGGTCGAGTACAGAGCAGATAAAACTGGAATTGTT
CACTTACCTTTTGGGAAGGCTGATTTTTCTGAAGAAGATCTTCTTGCAAACTTGATTGCT
GCAGTAAAATCAGTAGAAACTAACAAGCCGTCGGGGGCAAAGGGAGTATACTGGAGAAGC
GCACACATATGCTCTTCCATGGGGCCTTCTATTCGATTAAATATAAGGGAGATGCTTGAT
TACAAATCTCCGTCGAGTGTCTGA

Peptide Sequence

PEP ID

VIT_13s0064g00170.t01
PEP Infomation

pep chromosome:12X:13:21626893:21631656:1 gene:VIT_13s0064g00170 transcript:VIT_13s0064g00170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein [Source:UniProtKB/TrEMBL;Acc:F6HBE6]
Sequence

MASTATSPFSLMLTYAASSPLPTQDFIAPSLSFKTKPLFRAFSLYPLALQARERRPSGNG
PYDVVVAALAAEAEVAEAVEEVEGGEGDAVSTAPPPKPKKGKAALLLKRDRTRSKRFLEI
QKLRENKKEYDLQTAISLLKQMASTRFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQ
TVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMMPKVASLGKLL
GPRGLMPNPKAGTVTTNIPQAIAEFKKGKVEYRADKTGIVHLPFGKADFSEEDLLANLIA
AVKSVETNKPSGAKGVYWRSAHICSSMGPSIRLNIREMLDYKSPSSV

Transcript Sequence

Transcript ID

VIT_13s0064g00170.t01
Transcript Infomation

cdna chromosome:12X:13:21626893:21631656:1 gene:VIT_13s0064g00170 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein [Source:UniProtKB/TrEMBL;Acc:F6HBE6]
Sequence

CAGAAGCTCTCACAGCATAACAATGGCTTCAACCGCAACTTCACCCTTCTCTCTCATGCT
AACGTACGCCGCGTCCTCTCCTCTCCCTACCCAAGACTTCATCGCCCCTTCTCTCTCCTT
CAAGACCAAGCCTCTCTTCAGGGCTTTCTCTCTTTACCCACTTGCGCTCCAGGCCAGAGA
GAGGCGGCCCAGTGGTAATGGTCCATACGATGTGGTTGTGGCCGCTTTGGCTGCTGAAGC
TGAGGTAGCTGAGGCCGTGGAGGAGGTGGAAGGTGGGGAGGGTGACGCTGTTTCCACCGC
GCCGCCGCCTAAGCCGAAGAAAGGGAAGGCTGCGTTGCTGTTGAAGAGGGACAGGACGAG
GTCTAAGAGATTCTTGGAAATTCAAAAACTGAGGGAAAACAAGAAAGAGTATGACCTGCA
GACGGCAATATCATTGCTTAAGCAAATGGCAAGCACAAGGTTTGTGGAAACAGCTGAAGC
ACATTTTCGGCTCAACATTGACCCCAAATATAATGATCAACAACTGAGAGCAACAGTGAA
TTTGCCCAAGGGAACTGGACAGACTGTTAAAGTTGCTGTTCTAACACAAGGTGAAAAGTT
TGATGAAGCAAAAAATGCTGGAGCAGATTTGGTTGGAGGAGAGGACTTGATAGAACAGAT
AAAGGGAGGATTCATGGATTTTGACAAGTTGATTGCTTCTCCAGATATGATGCCTAAGGT
TGCAAGCTTAGGAAAACTTCTGGGACCACGAGGACTCATGCCAAATCCAAAAGCTGGTAC
TGTTACAACTAATATACCTCAGGCTATAGCAGAATTCAAGAAGGGAAAGGTCGAGTACAG
AGCAGATAAAACTGGAATTGTTCACTTACCTTTTGGGAAGGCTGATTTTTCTGAAGAAGA
TCTTCTTGCAAACTTGATTGCTGCAGTAAAATCAGTAGAAACTAACAAGCCGTCGGGGGC
AAAGGGAGTATACTGGAGAAGCGCACACATATGCTCTTCCATGGGGCCTTCTATTCGATT
AAATATAAGGGAGATGCTTGATTACAAATCTCCGTCGAGTGTCTGAAGAATTTATCAAAG
TTGTAAATTACATCTTCTACTGCTTAATTAGCTGCAAGGGTGTCTCCATTGGAGCTGTTT
AATATTTAGAAGAAGCAAAGAAAAACAGAAACTAGGATGAGAAGAGCTGGCCTTGATGGG
TGTCTCCTGCTCAAAACAAACTGTTGCAGGGTCGTTGTATCTTCTTTCACAGCAGTTGAG
CAAAATCTTTTATCAACACAGTTACCAATATTATCAAATTTTTTACTGGGAA