Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0047g01200.t01
CDS Infomation

cds chromosome:12X:13:18253705:18264650:1 gene:VIT_13s0047g01200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGTGGATAACAAGTTCTTCAATGCAGCCTTCCTCCTTGTGGCAACTTTGGTGGTT
GCCAAGCTTATATCTGCACTTATAATTCCTAGATCTAAAAAACGGCTTCCTCCGACTATA
AAGGCATTTCCATTAATTGGTGGGCTCATACGGTTCTTGAAAGGCCCAGTTGTCATGCTT
AGGGAAGAGTATCCAAAGCTTGGGAGTGTATTTACCTTGAAGCTATTGAACAAGAACATT
TCTTTCTTCATTGGACCTGACGTCTCAGCACATTTCTTCAAGGCTCCAGAGTCTGATCTT
AGCCAGCAAGAAGTATACCGGTTCAATGTGCCCATTTTTGGCCCTGGTGTTGTTTTTGAT
GTTGACTACTCTGTGCGGCAAGAGCAGTTCCGGTTTTTTACAGAAGCTTTGAGAGTTACT
AAATTGAAAGGGTATGTGGATCAGATGGTTATGGAGGCCGAGGATTACTTCTCCAAGTGG
GGAGATTGTGGAGAGGTAGACCTAAAATATGAGCTAGAGCATCTAATCATTTTGACAGCC
AGTAGATGCCTTTTGGGTCAAGAAATTCGTAATAAGTTGTTTGCTGATGTGTCTGCCCTC
TTCCATGATCTTGACAATGGGATGCTTCCTATCAGTGTTATCTTCCCATACCTGCCCATC
CCAGCCCACCGCAGGCGTGACCAGGCTCGCAAGAAGCTTGCTGAAATTTTTGCAAATATC
ATTGCTTCCAGAAAAGAAACTGGTAAGTCAGAAAACGACATGTTGCAATGCTTCATTGCC
TCAAAGTACAAAGATGGTCGCCCAACAACTGAATCTGAGGTCACTGGCCTGCTCATTGCT
GCACTCTTTGCTGGACAGCATACTAGTTCCATTACCTCCACCTGGACTGGGGCTTACCTC
CTTCGTCACAAGGAGTACCTTTCTGCTGTGCAGGATGAGCAGAGGAGCCTGATGAAGAAG
TATGGGAGCAAGGTTGATCATGATATCTTGTCTGAGATGGATGTTCTATATAGGTGCATC
AAGGAAGCTCTGAGACTCCACCCTCCTCTGATCATGCTGCTACGTAGCTCACACACTGAT
TTCAGTGTGACAACCAGAGATGGGAAAGAATATGACATTCCCAAGGGTCACATTGTTGCC
ACATCGCCAGCTTTTGCTAATCGGCTCCCACATATATACAAGGACCCAGACAGATATGAT
CCAGACAGATTTGCAGTTGGGAGAGAAGAGGACAAGGCTGCAGGGGCATTCTCATATATA
TCTTTTGGAGGCGGACGACATGGGTGTCTCGGTGAACCCTTTGCATACCTGCAAATAAAG
GCCATATGGAGCCATTTACTTAGAAACTTTGAGTTGGAACTGATCTCACCATTTCCAGAG
GTCGACTGGAATGCCATGGTTGTCGGCGTAAAAGGAAAGGTTATGGTGAGGTACAAGCGC
AGAGAGCTTCCTGTTAACTAA

Peptide Sequence

PEP ID

VIT_13s0047g01200.t01
PEP Infomation

pep chromosome:12X:13:18253705:18264650:1 gene:VIT_13s0047g01200 transcript:VIT_13s0047g01200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDVDNKFFNAAFLLVATLVVAKLISALIIPRSKKRLPPTIKAFPLIGGLIRFLKGPVVML
REEYPKLGSVFTLKLLNKNISFFIGPDVSAHFFKAPESDLSQQEVYRFNVPIFGPGVVFD
VDYSVRQEQFRFFTEALRVTKLKGYVDQMVMEAEDYFSKWGDCGEVDLKYELEHLIILTA
SRCLLGQEIRNKLFADVSALFHDLDNGMLPISVIFPYLPIPAHRRRDQARKKLAEIFANI
IASRKETGKSENDMLQCFIASKYKDGRPTTESEVTGLLIAALFAGQHTSSITSTWTGAYL
LRHKEYLSAVQDEQRSLMKKYGSKVDHDILSEMDVLYRCIKEALRLHPPLIMLLRSSHTD
FSVTTRDGKEYDIPKGHIVATSPAFANRLPHIYKDPDRYDPDRFAVGREEDKAAGAFSYI
SFGGGRHGCLGEPFAYLQIKAIWSHLLRNFELELISPFPEVDWNAMVVGVKGKVMVRYKR
RELPVN

Transcript Sequence

Transcript ID

VIT_13s0047g01200.t01
Transcript Infomation

cdna chromosome:12X:13:18253705:18264650:1 gene:VIT_13s0047g01200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGTCCAGTCTGTGCCCTGTGCCACTTCTTTCTCCATTTCTTCTGCTGCCTTTTTGTTTA
GTGGCTCTAAATCTATAAAAGCATTCTATCAATGGATGTGGATAACAAGTTCTTCAATGC
AGCCTTCCTCCTTGTGGCAACTTTGGTGGTTGCCAAGCTTATATCTGCACTTATAATTCC
TAGATCTAAAAAACGGCTTCCTCCGACTATAAAGGCATTTCCATTAATTGGTGGGCTCAT
ACGGTTCTTGAAAGGCCCAGTTGTCATGCTTAGGGAAGAGTATCCAAAGCTTGGGAGTGT
ATTTACCTTGAAGCTATTGAACAAGAACATTTCTTTCTTCATTGGACCTGACGTCTCAGC
ACATTTCTTCAAGGCTCCAGAGTCTGATCTTAGCCAGCAAGAAGTATACCGGTTCAATGT
GCCCATTTTTGGCCCTGGTGTTGTTTTTGATGTTGACTACTCTGTGCGGCAAGAGCAGTT
CCGGTTTTTTACAGAAGCTTTGAGAGTTACTAAATTGAAAGGGTATGTGGATCAGATGGT
TATGGAGGCCGAGGATTACTTCTCCAAGTGGGGAGATTGTGGAGAGGTAGACCTAAAATA
TGAGCTAGAGCATCTAATCATTTTGACAGCCAGTAGATGCCTTTTGGGTCAAGAAATTCG
TAATAAGTTGTTTGCTGATGTGTCTGCCCTCTTCCATGATCTTGACAATGGGATGCTTCC
TATCAGTGTTATCTTCCCATACCTGCCCATCCCAGCCCACCGCAGGCGTGACCAGGCTCG
CAAGAAGCTTGCTGAAATTTTTGCAAATATCATTGCTTCCAGAAAAGAAACTGGTAAGTC
AGAAAACGACATGTTGCAATGCTTCATTGCCTCAAAGTACAAAGATGGTCGCCCAACAAC
TGAATCTGAGGTCACTGGCCTGCTCATTGCTGCACTCTTTGCTGGACAGCATACTAGTTC
CATTACCTCCACCTGGACTGGGGCTTACCTCCTTCGTCACAAGGAGTACCTTTCTGCTGT
GCAGGATGAGCAGAGGAGCCTGATGAAGAAGTATGGGAGCAAGGTTGATCATGATATCTT
GTCTGAGATGGATGTTCTATATAGGTGCATCAAGGAAGCTCTGAGACTCCACCCTCCTCT
GATCATGCTGCTACGTAGCTCACACACTGATTTCAGTGTGACAACCAGAGATGGGAAAGA
ATATGACATTCCCAAGGGTCACATTGTTGCCACATCGCCAGCTTTTGCTAATCGGCTCCC
ACATATATACAAGGACCCAGACAGATATGATCCAGACAGATTTGCAGTTGGGAGAGAAGA
GGACAAGGCTGCAGGGGCATTCTCATATATATCTTTTGGAGGCGGACGACATGGGTGTCT
CGGTGAACCCTTTGCATACCTGCAAATAAAGGCCATATGGAGCCATTTACTTAGAAACTT
TGAGTTGGAACTGATCTCACCATTTCCAGAGGTCGACTGGAATGCCATGGTTGTCGGCGT
AAAAGGAAAGGTTATGGTGAGGTACAAGCGCAGAGAGCTTCCTGTTAACTAACTGGGAAA
ACTTCCCTATGCGATCTTCTTCGCGGATGGTTGGCAGGTTCAGAACCCATCCGTAAGTGT
GGATTT