Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0047g00510.t01
CDS Infomation

cds chromosome:12X:13:16736758:16825061:1 gene:VIT_13s0047g00510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTACGCCATGTCGGTGCTGCTTGGGCGCGCTCTGCCGGATGTGCGCGACGGGTTG
AAGCCGGTGCACCGTCGGATTCTATTTGCAATGCATGAATTGGGCCTTTCATCACGAAAA
CCATACAAGAAATGTGCTAGAGTTGTTGGAGAGGTTCTGGGGAAATTTCATCCACATGGA
GACACTGCGGTCTATGATTCCTTGGTGCGAATGGCACAGGATTTTTCCTTACGGTGCCCG
CTTATTCAAGGGCATGGAAATTTTGGTTCAGTTGATGCTGATCCTCCTGCCGCTATGCGA
TACACGGAGTGCAGACTGGAAGCACTCACGGAAGCAATGTTATTGGCAGATTTAGAGCAA
GATACTGTTGATTTTCTGCCCAACTTTGATAATTCTCAAAAAGAACCCTCACTTCTACCT
GCTCGGCTCCCAACTTTATTGTTGAATGGTTCTTCTGGGATTGCGGTTGGAATGGCCACT
AATATTCCTCCACATAATATTGGAGAGTTGGTAGATGTGCTTTGCGTGCTAATTCGTAAT
CCTGAAGCCACGCTGCAAGAATTGTTGGAATACATGCCCGGACCTGACTTTCCAACTGGA
GGACTAATCATGGGAAATATTGGCATCTTAGAGGCATATCGAACTGGGCGGGGACGTATA
ATAGTCAGAGGAAAGACTGAGGTTGAATTGCTCGACTCTAAAACCAAGAGGACTGCAGTC
ATAATAAAAGAGATCCCCTATCAGACAAACAAATCCTCACTTGTGGAGAAAATTGCTGAG
CTTGTGGAAAATAAGAGTTTGGATGGCATAAGTGATATTCGGGATGAGAGTGATCGTTCT
GGAATGCGTATAGTGATTGAGCTAAAACGGGGATCAGATCCATCAATTGTTTTGAATAAA
CTGTACCGTCTTACTGCTCTTCAGTCTAGTTTTAGCTGCAACATGATAGGTATTCTCGAT
GGACAACCTAAACTGATGGGTCTGAAGGAGTTGCTTCAGGCATTCTTAGATTTTAGATGC
TCTGTTGTTGAGAGGCGAGCAAGGTTTAAGCTGTCACAAGCACAAGAAAGAAGACATATT
GTTGAGGGTATTGTGGTGGGGCTTGATAATTTGGATGCAGTAATTCGTGTAATTAAGGAA
GCTCCAAGTAATGCAATGGCATCAACTGGTTTGAGAAATGAGTTTGGTTTATCTGAAAGG
CAGGCTGAAGCTATATTGGACATAAGCCTAAGAAGGATCACACGTCTGGAGAGAGAAAAG
TTTGTAACTGAAAGTAAATCCTTGATGGAACAAATTTCGAAGTTACAGGAACTATTGTCA
AGCAGGAAACAGATATTACAGCTAATCGAACAAGAAGCAATTGAGCTGAAGAACAGGTTT
TCCACTCCGAGGCGTTCAATGTTGGAGGACACTGATAGTGGTCAACTTGAAGATGTGGAT
GTTATACCAAATGAAGAAATGCTACTGGCTGTTAGTGAAAAAGGTTATGTCAAGCGGATG
AAACCTAATACCTTCAATCTCCAAAATCGTGGAACAATTGGTAAATCTGTTGGGAAATTG
AGAGTGAATGATGCAATGTCAGACTTCATTGTTTGTCATGCACATGACTATGTCCTGTAT
TTCAGTGATAGGGGAATAGTGCACTCAGCTCGTGCATATAAAATTCCAGAATGCACCCGA
ACTGCTGCAGGCACACCACTGGTTCAGATCTTATGTTTATCTGATGGTGAGAGAATAACT
TCCATAATTCCTGTGAGTGAGTTTGCTGAAGATCAGTTTCTACTGATGCTTACAATGAAT
GGATACATCAAGAAAGTATCATTGAATTTTTTCTCCTCAATCCGATCAACAGGAATCATA
GCAATTCAATTGGTTCCTGGTGATGAGCTCAAATGGGTCCGTTGCTGTACCAATGATGAC
CTTGTGGCCATGGCTTCACAGAATGGAATGGTTATTTTGAGTTCCTGTGAGATTATTCGA
GCTCTAGGAAGAAATACTAGGGGGTCCATTGCCATGAGATTGAAACAAGGGGATAAGATG
GCAAGCATGGACATAATACCAGCAGCAATTCGGAAAGACTTGGAGAAGGCATTGGAAGAC
CGCCAGAGCCGTGCTAGGAACCTCAATGGTCCATGGTTACTGTTTGTGTCTGAGAGCGGT
CTGGGAAAGCGGGTTCCTCTGAGTAGATTTCGCTTGTCACCTTTGAATAGAGTTGGTTTA
ATAGGTTACAAGTTTTCCGCAGAAGATCACTTGGCAGCAGTGTTTGTGGTTGGGTTTTCA
CTGACAGAAGATGGTGAAAGTGATGAACAAGTAGTTCTAGTGAGCCAAAGTGGGACCATT
AATAGAATTAAAGTTTGGGATATTTCTATACAGTCACGGTTTGCAAGGGGAGTAATTCTA
ATGCGGCTGGAGTATGCTGGAAAGATTCAGTCAGCTTCATTAATGTCAGCAACAGAAACA
GAGACTGATGACGAAGAAGCTGTTGCTGTTACACAGTAA

Peptide Sequence

PEP ID

VIT_13s0047g00510.t01
PEP Infomation

pep chromosome:12X:13:16736758:16825061:1 gene:VIT_13s0047g00510 transcript:VIT_13s0047g00510.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHG
DTAVYDSLVRMAQDFSLRCPLIQGHGNFGSVDADPPAAMRYTECRLEALTEAMLLADLEQ
DTVDFLPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNIGELVDVLCVLIRN
PEATLQELLEYMPGPDFPTGGLIMGNIGILEAYRTGRGRIIVRGKTEVELLDSKTKRTAV
IIKEIPYQTNKSSLVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSDPSIVLNK
LYRLTALQSSFSCNMIGILDGQPKLMGLKELLQAFLDFRCSVVERRARFKLSQAQERRHI
VEGIVVGLDNLDAVIRVIKEAPSNAMASTGLRNEFGLSERQAEAILDISLRRITRLEREK
FVTESKSLMEQISKLQELLSSRKQILQLIEQEAIELKNRFSTPRRSMLEDTDSGQLEDVD
VIPNEEMLLAVSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCHAHDYVLY
FSDRGIVHSARAYKIPECTRTAAGTPLVQILCLSDGERITSIIPVSEFAEDQFLLMLTMN
GYIKKVSLNFFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCEIIR
ALGRNTRGSIAMRLKQGDKMASMDIIPAAIRKDLEKALEDRQSRARNLNGPWLLFVSESG
LGKRVPLSRFRLSPLNRVGLIGYKFSAEDHLAAVFVVGFSLTEDGESDEQVVLVSQSGTI
NRIKVWDISIQSRFARGVILMRLEYAGKIQSASLMSATETETDDEEAVAVTQ

Transcript Sequence

Transcript ID

VIT_13s0047g00510.t01
Transcript Infomation

cdna chromosome:12X:13:16736758:16825061:1 gene:VIT_13s0047g00510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAAGGAAACGGGAGCTTGGTTCTCAAGGAAAAGGATGGCCGAGACGGGAGAATTGTGCC
CACCGAACTGCACAAGGAGGCCACCGAGGCCTACATGGCCTACGCCATGTCGGTGCTGCT
TGGGCGCGCTCTGCCGGATGTGCGCGACGGGTTGAAGCCGGTGCACCGTCGGATTCTATT
TGCAATGCATGAATTGGGCCTTTCATCACGAAAACCATACAAGAAATGTGCTAGAGTTGT
TGGAGAGGTTCTGGGGAAATTTCATCCACATGGAGACACTGCGGTCTATGATTCCTTGGT
GCGAATGGCACAGGATTTTTCCTTACGGTGCCCGCTTATTCAAGGGCATGGAAATTTTGG
TTCAGTTGATGCTGATCCTCCTGCCGCTATGCGATACACGGAGTGCAGACTGGAAGCACT
CACGGAAGCAATGTTATTGGCAGATTTAGAGCAAGATACTGTTGATTTTCTGCCCAACTT
TGATAATTCTCAAAAAGAACCCTCACTTCTACCTGCTCGGCTCCCAACTTTATTGTTGAA
TGGTTCTTCTGGGATTGCGGTTGGAATGGCCACTAATATTCCTCCACATAATATTGGAGA
GTTGGTAGATGTGCTTTGCGTGCTAATTCGTAATCCTGAAGCCACGCTGCAAGAATTGTT
GGAATACATGCCCGGACCTGACTTTCCAACTGGAGGACTAATCATGGGAAATATTGGCAT
CTTAGAGGCATATCGAACTGGGCGGGGACGTATAATAGTCAGAGGAAAGACTGAGGTTGA
ATTGCTCGACTCTAAAACCAAGAGGACTGCAGTCATAATAAAAGAGATCCCCTATCAGAC
AAACAAATCCTCACTTGTGGAGAAAATTGCTGAGCTTGTGGAAAATAAGAGTTTGGATGG
CATAAGTGATATTCGGGATGAGAGTGATCGTTCTGGAATGCGTATAGTGATTGAGCTAAA
ACGGGGATCAGATCCATCAATTGTTTTGAATAAACTGTACCGTCTTACTGCTCTTCAGTC
TAGTTTTAGCTGCAACATGATAGGTATTCTCGATGGACAACCTAAACTGATGGGTCTGAA
GGAGTTGCTTCAGGCATTCTTAGATTTTAGATGCTCTGTTGTTGAGAGGCGAGCAAGGTT
TAAGCTGTCACAAGCACAAGAAAGAAGACATATTGTTGAGGGTATTGTGGTGGGGCTTGA
TAATTTGGATGCAGTAATTCGTGTAATTAAGGAAGCTCCAAGTAATGCAATGGCATCAAC
TGGTTTGAGAAATGAGTTTGGTTTATCTGAAAGGCAGGCTGAAGCTATATTGGACATAAG
CCTAAGAAGGATCACACGTCTGGAGAGAGAAAAGTTTGTAACTGAAAGTAAATCCTTGAT
GGAACAAATTTCGAAGTTACAGGAACTATTGTCAAGCAGGAAACAGATATTACAGCTAAT
CGAACAAGAAGCAATTGAGCTGAAGAACAGGTTTTCCACTCCGAGGCGTTCAATGTTGGA
GGACACTGATAGTGGTCAACTTGAAGATGTGGATGTTATACCAAATGAAGAAATGCTACT
GGCTGTTAGTGAAAAAGGTTATGTCAAGCGGATGAAACCTAATACCTTCAATCTCCAAAA
TCGTGGAACAATTGGTAAATCTGTTGGGAAATTGAGAGTGAATGATGCAATGTCAGACTT
CATTGTTTGTCATGCACATGACTATGTCCTGTATTTCAGTGATAGGGGAATAGTGCACTC
AGCTCGTGCATATAAAATTCCAGAATGCACCCGAACTGCTGCAGGCACACCACTGGTTCA
GATCTTATGTTTATCTGATGGTGAGAGAATAACTTCCATAATTCCTGTGAGTGAGTTTGC
TGAAGATCAGTTTCTACTGATGCTTACAATGAATGGATACATCAAGAAAGTATCATTGAA
TTTTTTCTCCTCAATCCGATCAACAGGAATCATAGCAATTCAATTGGTTCCTGGTGATGA
GCTCAAATGGGTCCGTTGCTGTACCAATGATGACCTTGTGGCCATGGCTTCACAGAATGG
AATGGTTATTTTGAGTTCCTGTGAGATTATTCGAGCTCTAGGAAGAAATACTAGGGGGTC
CATTGCCATGAGATTGAAACAAGGGGATAAGATGGCAAGCATGGACATAATACCAGCAGC
AATTCGGAAAGACTTGGAGAAGGCATTGGAAGACCGCCAGAGCCGTGCTAGGAACCTCAA
TGGTCCATGGTTACTGTTTGTGTCTGAGAGCGGTCTGGGAAAGCGGGTTCCTCTGAGTAG
ATTTCGCTTGTCACCTTTGAATAGAGTTGGTTTAATAGGTTACAAGTTTTCCGCAGAAGA
TCACTTGGCAGCAGTGTTTGTGGTTGGGTTTTCACTGACAGAAGATGGTGAAAGTGATGA
ACAAGTAGTTCTAGTGAGCCAAAGTGGGACCATTAATAGAATTAAAGTTTGGGATATTTC
TATACAGTCACGGTTTGCAAGGGGAGTAATTCTAATGCGGCTGGAGTATGCTGGAAAGAT
TCAGTCAGCTTCATTAATGTCAGCAACAGAAACAGAGACTGATGACGAAGAAGCTGTTGC
TGTTACACAGTAAAAGAGTTCTTGCCATTTTGAGATGCCGAGACTCGTAGCAATCAACAC
ACGCTACAGCAACACACCTTACGTTAGGAGTGATCAGTTTTGTTGATGACACTAAACTCA
CATATGAAGATATGTGACAACAGTGTAAAGAAAGAACCAAGAGGAAGTATTTGCTGTAAC
TATGCTTGTAACTTTTTTGTCGCTCCAATCAAGATTTGCAACACTAGAACTTTATCCCTA
AGTAAATTATTTTTAATTCCACCATTTGGCTTGATTTAGAGCTATAACTTAAATCATAGA
ACATCCTCGCTTTGTTTACTACTTATTGGATATATGCTTTCAT