Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0047g00460.t01
CDS Infomation

cds chromosome:12X:13:16616815:16624055:-1 gene:VIT_13s0047g00460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTACGGCCTTATGCCATAAAAGGGCACAAGCGAAAGAAGAGGGAAGAGAACTATGAT
AGAGAGGAAGTAGAACAATTGCTAGAAGAGGAGACAGCAGCAACAGCCACACAGGATGAG
AAGAAGGCAGAAGAAGTCACACTTGAACTTCCTGGTATCCCACTTGTCCCATCCAACTTG
AACAACAAGACTGGTGTTACCTTCATTCTTGAGAGGGCTTGTTTGGAAGTTGCAAAAGTT
GGAAAGAGTTACCAGCTATTGAGCTCAGAGGATCATGCAAATTTCCTGAGGAAAAATAAC
AAAAACCCTGCTGAATACAGACCTGACATTCTTCATCAGGCTCTCTTAACTATTTTAGAT
AGCCCACTAAATAAGGCTGGGAGGCTACGAGCTGTGTATGTAAGAACCGAGAAAGGTGTG
CTTTTTGAAGTTAAGCCACATGTTCGCATTCCAAGGACATATAAGCGGTTCTCTGGGATC
ATGTTGCAGCTGTTACAAAAACTGAGCATTACTGCTGTTGGTAAGCGGGAGAAACTTTTA
CGCGTTATCAAGAACCCAGTTACTCAATACTTACCTGTTAACTCTCGAAAAATAGGCTTC
TCATATAGTTCAGAAAAGTCAATTCCAATGCGGGACTATGTGGCTGCTGTTAGCGATGAT
GTGGACCTTGTTTTTGTGGTTGGTGCAATGGCCCATGGGAAAATTAGTAACGATTATACA
GATGATTTCATAGCAATTTCTGGCTATCCATTGAGTGCTGCATGGTGTACTTATTTGATC
TGCGGGGCCTTGATGCAGAAGTGGAATATATTTTAG

Peptide Sequence

PEP ID

VIT_13s0047g00460.t01
PEP Infomation

pep chromosome:12X:13:16616815:16624055:-1 gene:VIT_13s0047g00460 transcript:VIT_13s0047g00460.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVRPYAIKGHKRKKREENYDREEVEQLLEEETAATATQDEKKAEEVTLELPGIPLVPSNL
NNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPAEYRPDILHQALLTILD
SPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAVGKREKLL
RVIKNPVTQYLPVNSRKIGFSYSSEKSIPMRDYVAAVSDDVDLVFVVGAMAHGKISNDYT
DDFIAISGYPLSAAWCTYLICGALMQKWNIF

Transcript Sequence

Transcript ID

VIT_13s0047g00460.t01
Transcript Infomation

cdna chromosome:12X:13:16616815:16624055:-1 gene:VIT_13s0047g00460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTACTGGCAGCAGAAGAAGCCTCCATCTCTCGCAGTCGATCATCCTTTCTCCAAACGCAG
CGTTTCGGTTGACCTCTGAGTTCAAGGAAATGGTACGGCCTTATGCCATAAAAGGGCACA
AGCGAAAGAAGAGGGAAGAGAACTATGATAGAGAGGAAGTAGAACAATTGCTAGAAGAGG
AGACAGCAGCAACAGCCACACAGGATGAGAAGAAGGCAGAAGAAGTCACACTTGAACTTC
CTGGTATCCCACTTGTCCCATCCAACTTGAACAACAAGACTGGTGTTACCTTCATTCTTG
AGAGGGCTTGTTTGGAAGTTGCAAAAGTTGGAAAGAGTTACCAGCTATTGAGCTCAGAGG
ATCATGCAAATTTCCTGAGGAAAAATAACAAAAACCCTGCTGAATACAGACCTGACATTC
TTCATCAGGCTCTCTTAACTATTTTAGATAGCCCACTAAATAAGGCTGGGAGGCTACGAG
CTGTGTATGTAAGAACCGAGAAAGGTGTGCTTTTTGAAGTTAAGCCACATGTTCGCATTC
CAAGGACATATAAGCGGTTCTCTGGGATCATGTTGCAGCTGTTACAAAAACTGAGCATTA
CTGCTGTTGGTAAGCGGGAGAAACTTTTACGCGTTATCAAGAACCCAGTTACTCAATACT
TACCTGTTAACTCTCGAAAAATAGGCTTCTCATATAGTTCAGAAAAGTCAATTCCAATGC
GGGACTATGTGGCTGCTGTTAGCGATGATGTGGACCTTGTTTTTGTGGTTGGTGCAATGG
CCCATGGGAAAATTAGTAACGATTATACAGATGATTTCATAGCAATTTCTGGCTATCCAT
TGAGTGCTGCATGGTGTACTTATTTGATCTGCGGGGCCTTGATGCAGAAGTGGAATATAT
TTTAGGTCCCTGTCTAAAAGCTGAAGATTGGGAGCTGATGTTTTCATTTCCAGTAGTACA
TGTAAATCCAGGTGCAATGCTTGCATTTAGGATATTTAGCACTTTTTGTTGAGGGAATAT
ATGAATGTTGTCATGTTTTTGAAAAAGGAAGAAAGAAAATTTAAGCTGGACTTCCTATGT
ATATTGAGCTT