Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_13s0047g00310.t01
CDS Infomation

cds chromosome:12X:13:16053582:16066629:1 gene:VIT_13s0047g00310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGAGGTGCTGCAGGTTTGGCTATGATTATATTGGTGGTTATGAACGGATGGGAGGC
CGGCCTGGATATCCTGATGAAAAATCTCATGGTCGGTTTATGAATCGTTCAGATTGGGAA
TCTAATCGTGGTGGTTATGCTGACTTGTTAGACACAGGAAGTAAACAAAGAGAAGGTTTG
ATGTCCTATAAGCAATTCATTCAGGAGCTTGAAGATGATATATTACCAGCTGAAGCTGAG
CGCAGGTATCAAGAATATAGATCAGAATACATTTCTACTCAGAAGCGTGCCTTCTTTGAT
GCTCATAAGGATGAGGAGTGGTTGAAAGACAAGTACCATCCAACAAATTTACTTGCAGTC
ATTGAAAGGAGGAATGAAAATGCTCGACGGATGGCAAAGGATTTTTTACTTGATTTGCAG
AGTGGAACCTTGGACATAGGCCCTGGTGTAAATGCCTCGTCATCAAACAAATCAGGGCAA
ACCAGTGATCCAAACTCTGATGATGAAACTGAGACTGGTGACAAACGAAGACGACATGGT
AGGGGACCGATCAAAGAAAGTGATCTTTCGACTGCTGCAGTGGCTCATCCAAACAGTTCT
GAGCCTAGACGAATACAAGCTGATATAGAACAAGCACTGGCTCTTGTGCGCAAGCTTGAT
TCTGAAAAAGGGGTTGAAGATAATATTTTATGCAGTGCTGAACAAAAAAAGACGGACAGT
GATAAATCTCACAGTGGATCCATGGGCCCTATTATAATCATACGAGGTTTAGCGTCTGTC
AAGGGCCTTGAAGGAATTGAGCTATTGGACACAATTCTTACTTATCTTTGGCGTATCCAT
GGTTTGGATTACTATGGCATGGTTGAAACAAGTGAAGCCAAGGGTCTTCGGCATGTGAGA
GCAGAGGGAAAGGGTCATGAAGAAAATAGTAAAGCTGGGGCTGACTGGGAAAAGAAATTA
GACTCTCGTTGGCAAGACAGGTTGAGGGGTCAGGATCCCTTGGAAACAATGGCTGCTAAA
GAGAAGATAGATGCAGCAGCTGTTGAAGGTTTAGATCCATATGTACGAAAAATAAGAGAT
GAGAGGTATGGATGGAAGTATGGTTGTGGAGCCAAGGGTTGCACAAAGCTCTTCCATGCA
GCTGAATTTGTGCATAAGCATCTGAAGTTGAAACACCCTGAACTCGTCATGGATCTGACT
ACGAAAGTGCGTGAGGATCTGTATTTCCAAAACTATATGAATGATCCAGATGCTCCTGGT
GGGACACCTGTCATGCAGCAGCAGCTGCTGAAAGACAGGCTACAGAGGCGTAGGCCTGGT
CTGGATAATCGATTGAAAGATGATCGTGGTAACAGGAGGGAACATGACAGGATTGAAAGA
ATTAACGACGGTGAACGGTTTGATAGGACTGATAACTCTCCACCCCATGATCGACAGTCC
AAAGGTGGTGGCTTGGAAGGAGGAAATCTTGATGAATCCATGTATGATACTTATGGTGGG
AAAGACTTGGGTGTCATTCCGCCTTTTCCCTCAGATATGGGTCCTCCTCCAGTCTTGATG
CCTGTACCTGGTGCTGGGCCTTTGGGACCTTTTGTTCCTGCACCACCTGAGGTTGCAATG
CGTATGTTAAGGGAGCAGGGAGGCTCATCCTCATATGAAGGTGGTAGACAAATGCGTACT
GGTCCCCATATTGGGGGACCGGCACCGATCCTTGGTGTATCATCTGCTTTTAGACAAGAT
CCTCGACGATTACGAAGGTAA

Peptide Sequence

PEP ID

VIT_13s0047g00310.t01
PEP Infomation

pep chromosome:12X:13:16053582:16066629:1 gene:VIT_13s0047g00310 transcript:VIT_13s0047g00310.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLRCCRFGYDYIGGYERMGGRPGYPDEKSHGRFMNRSDWESNRGGYADLLDTGSKQREGL
MSYKQFIQELEDDILPAEAERRYQEYRSEYISTQKRAFFDAHKDEEWLKDKYHPTNLLAV
IERRNENARRMAKDFLLDLQSGTLDIGPGVNASSSNKSGQTSDPNSDDETETGDKRRRHG
RGPIKESDLSTAAVAHPNSSEPRRIQADIEQALALVRKLDSEKGVEDNILCSAEQKKTDS
DKSHSGSMGPIIIIRGLASVKGLEGIELLDTILTYLWRIHGLDYYGMVETSEAKGLRHVR
AEGKGHEENSKAGADWEKKLDSRWQDRLRGQDPLETMAAKEKIDAAAVEGLDPYVRKIRD
ERYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVMDLTTKVREDLYFQNYMNDPDAPG
GTPVMQQQLLKDRLQRRRPGLDNRLKDDRGNRREHDRIERINDGERFDRTDNSPPHDRQS
KGGGLEGGNLDESMYDTYGGKDLGVIPPFPSDMGPPPVLMPVPGAGPLGPFVPAPPEVAM
RMLREQGGSSSYEGGRQMRTGPHIGGPAPILGVSSAFRQDPRRLRR

Transcript Sequence

Transcript ID

VIT_13s0047g00310.t01
Transcript Infomation

cdna chromosome:12X:13:16053582:16066629:1 gene:VIT_13s0047g00310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGAGGTGCTGCAGGTTTGGCTATGATTATATTGGTGGTTATGAACGGATGGGAGGC
CGGCCTGGATATCCTGATGAAAAATCTCATGGTCGGTTTATGAATCGTTCAGATTGGGAA
TCTAATCGTGGTGGTTATGCTGACTTGTTAGACACAGGAAGTAAACAAAGAGAAGGTTTG
ATGTCCTATAAGCAATTCATTCAGGAGCTTGAAGATGATATATTACCAGCTGAAGCTGAG
CGCAGGTATCAAGAATATAGATCAGAATACATTTCTACTCAGAAGCGTGCCTTCTTTGAT
GCTCATAAGGATGAGGAGTGGTTGAAAGACAAGTACCATCCAACAAATTTACTTGCAGTC
ATTGAAAGGAGGAATGAAAATGCTCGACGGATGGCAAAGGATTTTTTACTTGATTTGCAG
AGTGGAACCTTGGACATAGGCCCTGGTGTAAATGCCTCGTCATCAAACAAATCAGGGCAA
ACCAGTGATCCAAACTCTGATGATGAAACTGAGACTGGTGACAAACGAAGACGACATGGT
AGGGGACCGATCAAAGAAAGTGATCTTTCGACTGCTGCAGTGGCTCATCCAAACAGTTCT
GAGCCTAGACGAATACAAGCTGATATAGAACAAGCACTGGCTCTTGTGCGCAAGCTTGAT
TCTGAAAAAGGGGTTGAAGATAATATTTTATGCAGTGCTGAACAAAAAAAGACGGACAGT
GATAAATCTCACAGTGGATCCATGGGCCCTATTATAATCATACGAGGTTTAGCGTCTGTC
AAGGGCCTTGAAGGAATTGAGCTATTGGACACAATTCTTACTTATCTTTGGCGTATCCAT
GGTTTGGATTACTATGGCATGGTTGAAACAAGTGAAGCCAAGGGTCTTCGGCATGTGAGA
GCAGAGGGAAAGGGTCATGAAGAAAATAGTAAAGCTGGGGCTGACTGGGAAAAGAAATTA
GACTCTCGTTGGCAAGACAGGTTGAGGGGTCAGGATCCCTTGGAAACAATGGCTGCTAAA
GAGAAGATAGATGCAGCAGCTGTTGAAGGTTTAGATCCATATGTACGAAAAATAAGAGAT
GAGAGGTATGGATGGAAGTATGGTTGTGGAGCCAAGGGTTGCACAAAGCTCTTCCATGCA
GCTGAATTTGTGCATAAGCATCTGAAGTTGAAACACCCTGAACTCGTCATGGATCTGACT
ACGAAAGTGCGTGAGGATCTGTATTTCCAAAACTATATGAATGATCCAGATGCTCCTGGT
GGGACACCTGTCATGCAGCAGCAGCTGCTGAAAGACAGGCTACAGAGGCGTAGGCCTGGT
CTGGATAATCGATTGAAAGATGATCGTGGTAACAGGAGGGAACATGACAGGATTGAAAGA
ATTAACGACGGTGAACGGTTTGATAGGACTGATAACTCTCCACCCCATGATCGACAGTCC
AAAGGTGGTGGCTTGGAAGGAGGAAATCTTGATGAATCCATGTATGATACTTATGGTGGG
AAAGACTTGGGTGTCATTCCGCCTTTTCCCTCAGATATGGGTCCTCCTCCAGTCTTGATG
CCTGTACCTGGTGCTGGGCCTTTGGGACCTTTTGTTCCTGCACCACCTGAGGTTGCAATG
CGTATGTTAAGGGAGCAGGGAGGCTCATCCTCATATGAAGGTGGTAGACAAATGCGTACT
GGTCCCCATATTGGGGGACCGGCACCGATCCTTGGTGTATCATCTGCTTTTAGACAAGAT
CCTCGACGATTACGAAGGTAATTATCAAGATCTGGATGCCCCAGAGGATGAAGTGACCGT
GATAGACTACAGGAGCTTGTAGGTATTAGAGGGTTTTTTTTTTCTCCAAATGCATTGATC
ATCAGATGGGTTTTTGTATGTGATAAACAGTTGTTCCTTTCTCCTGGTGTAGTATGCCAT
TGTGGGCTGTGAGGTTTCTTTACACTCTTTTTGAGGGCAAAGGCTTAAGTGACTTTTGTC
GGAACGATTTTGGCTTTTAGGATTTTATTACAGGGCGGAAGGGCATTGGAGTTGCTAAAA
GACTTTTATTTACTAATTGGCTTCCAGTCAATGTGGACTCTATTATTTGTACTGCTTCAT
TGCCGGCTATGTACTGAAGAAGAGAATTTACTTTTAGAATGGGAAAAGAAAGAGCAAAAA
TCTTTGGGCAATAGTTGATA